AT2G47410 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G47410
Description WD40/YVTN repeat-like-containing domain;Bromodomain
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 1 0.31 -0.3
2 AT3G50380 Protein of unknown function (DUF1162) 0.82 0.31 -0.31
3 AT2G39340 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3A, yeast Sac3 homolog A 0.82 0.34 -0.3
4 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.81 0.3 -0.32
5 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.81 0.3 -0.33
6 AT5G24740 Protein of unknown function (DUF1162) 0.8 0.29 -0.32
7 AT1G02080 transcription regulators 0.8 0.29 -0.32
8 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.79 0.31 -0.34
9 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.78 0.34 -0.33
10 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.78 0.33 -0.31
11 AT1G79280 nuclear pore anchor TRANSLOCATED PROMOTER REGION,
nuclear pore anchor		 0.77 0.33 -0.3
12 AT3G07274 unknown pseudogene 0.77 0.3 -0.3
13 AT2G47980 sister-chromatid cohesion protein 3 SISTER-CHROMATID COHESION PROTEIN
3, sister-chromatid cohesion
protein 3		 0.76 0.35 -0.33
14 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 0.76 0.32 -0.31
15 AT1G74250 DNAJ heat shock N-terminal domain-containing protein 0.76 0.34 -0.3
16 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.75 0.3 -0.31
17 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.75 0.33 -0.31
18 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 0.74 0.32 -0.33
19 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.74 0.32 -0.31
20 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.74 0.33 -0.32
21 AT1G63490 transcription factor jumonji (jmjC) domain-containing
protein		 0.73 0.28 -0.31
22 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.73 0.31 -0.3
23 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.73 0.32 -0.33
24 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 0.73 0.3 -0.34
25 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 0.73 0.32 -0.31
26 AT1G27630 cyclin T 1;3 cyclin T 1;3 0.73 0.32 -0.29
27 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 0.73 0.31 -0.31
28 AT1G13910 Leucine-rich repeat (LRR) family protein 0.73 0.31 -0.31
29 AT5G01290 mRNA capping enzyme family protein 0.73 0.32 -0.3
30 AT2G37520 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.72 0.33 -0.31
31 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.72 0.32 -0.3
32 AT1G79950 RAD3-like DNA-binding helicase protein 0.72 0.31 -0.3
33 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.72 0.32 -0.31
34 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 0.71 0.33 -0.31
35 AT3G20290 EPS15 homology domain 1 EPS15 homology domain 1, EPS15
homology domain 1		 0.71 0.32 -0.35
36 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.71 0.32 -0.32
37 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 0.71 0.31 -0.33
38 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.71 0.33 -0.29
39 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.71 0.32 -0.32
40 AT4G33210 F-box family protein SLOW MOTION 0.71 0.32 -0.31
41 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 0.71 0.33 -0.33
42 AT2G07360 SH3 domain-containing protein 0.71 0.33 -0.3
43 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 0.71 0.32 -0.32
44 AT5G04460 RING/U-box superfamily protein 0.71 0.3 -0.31
45 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.31 -0.31
46 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 0.7 0.32 -0.32
47 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.7 0.31 -0.32
48 AT1G07880 Protein kinase superfamily protein ATMPK13 -0.7 0.3 -0.32
49 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 0.7 0.35 -0.33
50 AT5G42220 Ubiquitin-like superfamily protein 0.7 0.33 -0.31
51 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.7 0.29 -0.32
52 AT2G01460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.32 -0.32
53 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein 0.69 0.31 -0.33
54 AT2G28410 unknown protein; Has 18 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.3 -0.31
55 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.31 -0.3
56 AT2G41280 late embryogenesis abundant protein (M10) / LEA protein M10 ATM10, M10 0.69 0.29 -0.31
57 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.32 -0.32
58 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.69 0.32 -0.32
59 AT5G26240 chloride channel D ATCLC-D, chloride channel D 0.68 0.31 -0.3
60 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 0.68 0.33 -0.33
61 AT1G18640 3-phosphoserine phosphatase 3-phosphoserine phosphatase -0.68 0.34 -0.31
62 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.31 -0.31
63 AT3G01310 Phosphoglycerate mutase-like family protein 0.68 0.3 -0.33
64 AT4G23730 Galactose mutarotase-like superfamily protein -0.68 0.31 -0.31
65 AT1G31320 LOB domain-containing protein 4 LOB domain-containing protein 4 -0.68 0.29 -0.32
66 AT5G07580 Integrase-type DNA-binding superfamily protein -0.68 0.34 -0.3
67 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.68 0.3 -0.32
68 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 -0.68 0.31 -0.3
69 AT5G28630 glycine-rich protein -0.67 0.32 -0.3
70 AT3G09850 D111/G-patch domain-containing protein 0.67 0.31 -0.32
71 AT2G46930 Pectinacetylesterase family protein -0.67 0.3 -0.3
72 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 0.67 0.3 -0.32
73 AT1G78610 mechanosensitive channel of small conductance-like 6 mechanosensitive channel of small
conductance-like 6		 0.67 0.33 -0.33
74 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.67 0.32 -0.34
75 AT4G12760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.67 0.31 -0.33
76 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 -0.67 0.31 -0.31
77 AT3G06480 DEAD box RNA helicase family protein 0.67 0.31 -0.3
78 AT1G18160 Protein kinase superfamily protein 0.67 0.32 -0.32
79 AT5G40340 Tudor/PWWP/MBT superfamily protein 0.66 0.32 -0.31
80 AT3G19670 pre-mRNA-processing protein 40B pre-mRNA-processing protein 40B,
pre-mRNA-processing protein 40B		 0.66 0.31 -0.32
81 AT4G14220 RING-H2 group F1A RING-H2 group F1A 0.66 0.32 -0.32
82 AT1G77800 PHD finger family protein 0.66 0.31 -0.32
83 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.66 0.3 -0.3
84 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.66 0.3 -0.32
85 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 0.66 0.31 -0.29
86 AT1G29080 Papain family cysteine protease 0.66 0.34 -0.32
87 AT1G47210 cyclin-dependent protein kinase 3;2 cyclin-dependent protein kinase
3;2		 -0.66 0.32 -0.34
88 AT4G32640 Sec23/Sec24 protein transport family protein 0.66 0.33 -0.34
89 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.66 0.33 -0.31
90 AT3G62240 RING/U-box superfamily protein 0.66 0.34 -0.31
91 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.66 0.32 -0.29
92 AT5G58410 HEAT/U-box domain-containing protein 0.66 0.31 -0.32
93 AT2G29190 pumilio 2 pumilio 2, pumilio 2 0.66 0.3 -0.3
94 AT2G20320 DENN (AEX-3) domain-containing protein 0.66 0.29 -0.32
95 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.66 0.3 -0.28
96 AT2G46560 transducin family protein / WD-40 repeat family protein 0.66 0.29 -0.3
97 AT1G07160 Protein phosphatase 2C family protein 0.66 0.29 -0.33
98 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.65 0.33 -0.32
99 AT3G55350 PIF / Ping-Pong family of plant transposases -0.65 0.33 -0.32
100 AT5G62890 Xanthine/uracil permease family protein -0.65 0.31 -0.32
101 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.65 0.32 -0.31
102 AT2G16485 nucleic acid binding;zinc ion binding;DNA binding 0.65 0.32 -0.3
103 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 0.65 0.29 -0.33
104 AT5G48120 ARM repeat superfamily protein 0.65 0.34 -0.33
105 AT2G20480 unknown protein; Has 19 Blast hits to 19 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.33 -0.29
106 AT1G77600 ARM repeat superfamily protein 0.65 0.31 -0.3
107 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.65 0.31 -0.32
108 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.65 0.3 -0.3
109 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 -0.65 0.31 -0.3
110 AT4G29940 pathogenesis related homeodomain protein A pathogenesis related homeodomain
protein A		 0.65 0.31 -0.32
111 AT1G36510 Nucleic acid-binding proteins superfamily 0.64 0.33 -0.31
112 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA 0.64 0.3 -0.3
113 AT5G61590 Integrase-type DNA-binding superfamily protein -0.64 0.33 -0.31
114 AT5G47480 RGPR-related 0.64 0.3 -0.31
115 AT4G02710 Kinase interacting (KIP1-like) family protein 0.64 0.31 -0.3
116 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.64 0.33 -0.31
117 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein 0.64 0.3 -0.33
118 AT5G20840 Phosphoinositide phosphatase family protein 0.64 0.33 -0.32
119 AT5G55040 DNA-binding bromodomain-containing protein 0.64 0.31 -0.3
120 AT4G17330 G2484-1 protein G2484-1 protein, G2484-1 protein 0.64 0.31 -0.3
121 AT1G50030 target of rapamycin target of rapamycin 0.64 0.31 -0.3
122 AT5G37370 PRP38 family protein ATSRL1 0.64 0.33 -0.31
123 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.64 0.29 -0.31
124 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 0.64 0.32 -0.3
125 AT4G14600 Target SNARE coiled-coil domain protein -0.63 0.31 -0.31
126 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain -0.63 0.31 -0.3
127 AT4G17980 NAC domain containing protein 71 NAC domain containing protein 71,
NAC domain containing protein 71		 -0.63 0.33 -0.31
128 AT1G05430 unknown protein; Has 31 Blast hits to 31 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.32 -0.31
129 AT5G19630 alpha/beta-Hydrolases superfamily protein -0.62 0.3 -0.3
130 AT4G14630 germin-like protein 9 germin-like protein 9 -0.61 0.31 -0.32
131 AT1G16530 ASYMMETRIC LEAVES 2-like 9 ASYMMETRIC LEAVES 2-like 9, LOB
DOMAIN-CONTAINING PROTEIN 3		 -0.61 0.32 -0.3
132 AT4G27760 NAD(P)-binding Rossmann-fold superfamily protein FOREVER YOUNG, FEY3 -0.6 0.28 -0.32
133 AT5G07040 RING/U-box superfamily protein -0.6 0.33 -0.31
134 AT2G41290 strictosidine synthase-like 2 strictosidine synthase-like 2 -0.59 0.31 -0.31
135 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.59 0.29 -0.3
136 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.59 0.3 -0.33
137 AT1G20050 C-8,7 sterol isomerase HYDRA1 -0.58 0.29 -0.31
138 AT5G51400 PLAC8 family protein -0.58 0.32 -0.33
139 AT5G59410 Rab5-interacting family protein -0.58 0.31 -0.32
140 AT5G02560 histone H2A 12 histone H2A 12 -0.58 0.31 -0.32
141 AT2G47320 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.58 0.31 -0.31
142 AT5G38970 brassinosteroid-6-oxidase 1 ATBR6OX,
BRASSINOSTEROID-6-OXIDASE,
brassinosteroid-6-oxidase 1,
CYP85A1		 -0.58 0.32 -0.32
143 AT2G07505 zinc ion binding -0.58 0.35 -0.33
144 AT1G53680 glutathione S-transferase TAU 28 glutathione S-transferase TAU 28,
glutathione S-transferase TAU 28		 -0.57 0.33 -0.32
145 AT3G06090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower, leaf, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, LP.08 eight leaves visible, E expanded cotyledon
stage; Has 7 Blast hits to 7 proteins in 2 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.33 -0.31
146 AT1G53710 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.57 0.34 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
147 C0145 Maltotetraose - Maltotetraose starch degradation II 0.77 0.4 -0.47 C0145