AGICode | AT2G43360 |
Description | Radical SAM superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G43360 | Radical SAM superfamily protein | BIOTIN AUXOTROPH 2, BIOTIN AUXOTROPH B |
1 | 0.32 | -0.3 | ||
2 | AT2G39670 | Radical SAM superfamily protein | 0.86 | 0.32 | -0.29 | |||
3 | AT3G62060 | Pectinacetylesterase family protein | 0.85 | 0.32 | -0.32 | |||
4 | AT1G13340 | Regulator of Vps4 activity in the MVB pathway protein | -0.83 | 0.3 | -0.33 | |||
5 | AT1G20010 | tubulin beta-5 chain | tubulin beta-5 chain | 0.83 | 0.3 | -0.34 | ||
6 | AT5G17620 | CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.83 | 0.34 | -0.3 | |||
7 | AT1G16790 | ribosomal protein-related | 0.83 | 0.31 | -0.31 | |||
8 | AT5G59870 | histone H2A 6 | histone H2A 6 | 0.83 | 0.32 | -0.32 | ||
9 | AT4G24510 | HXXXD-type acyl-transferase family protein | ECERIFERUM 2, VC-2, VC2 | 0.83 | 0.33 | -0.31 | ||
10 | AT3G49430 | SER/ARG-rich protein 34A | Serine/Arginine-Rich Protein Splicing Factor 34a, Serine/Arginine-Rich Protein Splicing Factor 34a, SER/ARG-rich protein 34A |
0.82 | 0.33 | -0.33 | ||
11 | AT1G14280 | phytochrome kinase substrate 2 | phytochrome kinase substrate 2 | 0.82 | 0.33 | -0.34 | ||
12 | AT1G12090 | extensin-like protein | extensin-like protein | 0.82 | 0.32 | -0.3 | ||
13 | AT4G23820 | Pectin lyase-like superfamily protein | 0.81 | 0.31 | -0.33 | |||
14 | AT3G07510 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.81 | 0.3 | -0.31 | |||
15 | AT4G18060 | SH3 domain-containing protein | 0.81 | 0.31 | -0.31 | |||
16 | AT2G06925 | Phospholipase A2 family protein | PHOSPHOLIPASE A2-ALPHA, PLA2-ALPHA | 0.81 | 0.31 | -0.32 | ||
17 | AT5G55620 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.81 | 0.31 | -0.33 | |||
18 | AT1G26730 | EXS (ERD1/XPR1/SYG1) family protein | -0.8 | 0.31 | -0.31 | |||
19 | AT5G63970 | Copine (Calcium-dependent phospholipid-binding protein) family |
-0.8 | 0.31 | -0.32 | |||
20 | AT3G06840 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits to 33 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.8 | 0.33 | -0.31 | |||
21 | AT2G45560 | cytochrome P450, family 76, subfamily C, polypeptide 1 | cytochrome P450, family 76, subfamily C, polypeptide 1 |
0.79 | 0.32 | -0.32 | ||
22 | AT5G47630 | mitochondrial acyl carrier protein 3 | mitochondrial acyl carrier protein 3 |
0.79 | 0.3 | -0.3 | ||
23 | AT5G02540 | NAD(P)-binding Rossmann-fold superfamily protein | 0.79 | 0.32 | -0.31 | |||
24 | AT5G64330 | Phototropic-responsive NPH3 family protein | JK218, NON-PHOTOTROPIC HYPOCOTYL 3, ROOT PHOTOTROPISM 3 |
0.79 | 0.31 | -0.32 | ||
25 | AT1G35620 | PDI-like 5-2 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 8, PDI-like 5-2, PROTEIN DISULFIDE ISOMERASE 8, PDI-like 5-2 |
0.79 | 0.32 | -0.32 | ||
26 | AT1G28480 | Thioredoxin superfamily protein | GRX480, roxy19 | -0.79 | 0.29 | -0.31 | ||
27 | AT3G10730 | SAD1/UNC-84 domain protein 2 | ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2, SAD1/UNC-84 domain protein 2 |
0.78 | 0.32 | -0.3 | ||
28 | AT1G24360 | NAD(P)-binding Rossmann-fold superfamily protein | 0.78 | 0.33 | -0.3 | |||
29 | AT1G78280 | transferases, transferring glycosyl groups | -0.78 | 0.32 | -0.32 | |||
30 | AT5G07590 | Transducin/WD40 repeat-like superfamily protein | 0.78 | 0.31 | -0.32 | |||
31 | AT5G24330 | ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 | ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6, SET DOMAIN PROTEIN 34 |
0.78 | 0.31 | -0.31 | ||
32 | AT2G05990 | NAD(P)-binding Rossmann-fold superfamily protein | ENOYL-ACP REDUCTASE 1, MOSAIC DEATH 1 |
0.78 | 0.32 | -0.29 | ||
33 | AT1G20490 | AMP-dependent synthetase and ligase family protein | -0.77 | 0.3 | -0.3 | |||
34 | AT3G55360 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | ATTSC13, ECERIFERUM 10, ENOYL-COA REDUCTASE, TSC13 |
0.77 | 0.33 | -0.33 | ||
35 | AT3G13674 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.77 | 0.3 | -0.31 | |||
36 | AT1G19740 | ATP-dependent protease La (LON) domain protein | 0.77 | 0.33 | -0.3 | |||
37 | AT1G35350 | EXS (ERD1/XPR1/SYG1) family protein | -0.77 | 0.33 | -0.31 | |||
38 | AT5G01460 | LMBR1-like membrane protein | 0.77 | 0.29 | -0.32 | |||
39 | AT1G80000 | CASC3/Barentsz eIF4AIII binding | 0.77 | 0.32 | -0.3 | |||
40 | AT1G21690 | ATPase family associated with various cellular activities (AAA) |
embryo defective 1968, replication factor C 4 |
0.77 | 0.29 | -0.3 | ||
41 | AT5G17840 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | 0.77 | 0.32 | -0.32 | |||
42 | AT2G38800 | Plant calmodulin-binding protein-related | -0.77 | 0.32 | -0.29 | |||
43 | AT2G34590 | Transketolase family protein | 0.76 | 0.31 | -0.31 | |||
44 | AT3G24982 | receptor like protein 40 | receptor like protein 40, receptor like protein 40 |
-0.76 | 0.31 | -0.33 | ||
45 | AT4G36250 | aldehyde dehydrogenase 3F1 | aldehyde dehydrogenase 3F1 | 0.76 | 0.32 | -0.3 | ||
46 | AT1G21540 | AMP-dependent synthetase and ligase family protein | 0.76 | 0.33 | -0.34 | |||
47 | AT5G53860 | embryo defective 2737 | embryo defective 2737, EMBRYO DEFECTIVE 64 |
0.76 | 0.31 | -0.31 | ||
48 | AT4G32330 | TPX2 (targeting protein for Xklp2) protein family | 0.76 | 0.32 | -0.32 | |||
49 | AT5G22880 | histone B2 | HISTONE H2B, histone B2 | 0.76 | 0.3 | -0.35 | ||
50 | AT2G17520 | Endoribonuclease/protein kinase IRE1-like | ARABIDOPSIS THALIANA INOSITOL REQUIRING 1-2, INOSITOL REQUIRING 1-2, IRE1A |
-0.75 | 0.32 | -0.31 | ||
51 | AT1G69450 | Early-responsive to dehydration stress protein (ERD4) | -0.75 | 0.31 | -0.3 | |||
52 | AT3G57530 | calcium-dependent protein kinase 32 | ATCPK32, CDPK32, calcium-dependent protein kinase 32 |
-0.74 | 0.29 | -0.31 | ||
53 | AT3G16860 | COBRA-like protein 8 precursor | COBRA-like protein 8 precursor | -0.74 | 0.31 | -0.32 | ||
54 | AT3G22460 | O-acetylserine (thiol) lyase (OAS-TL) isoform A2 | O-acetylserine (thiol) lyase (OAS-TL) isoform A2 |
-0.73 | 0.33 | -0.33 | ||
55 | AT3G08720 | serine/threonine protein kinase 2 | Arabidopsis thaliana protein kinase 19, ARABIDOPSIS THALIANA PROTEIN KINASE 2, ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2, serine/threonine protein kinase 2 |
-0.73 | 0.3 | -0.31 | ||
56 | AT2G42760 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). |
-0.73 | 0.3 | -0.33 | |||
57 | AT2G27310 | F-box family protein | -0.73 | 0.32 | -0.31 | |||
58 | AT5G24160 | squalene monoxygenase 6 | squalene monoxygenase 6 | -0.73 | 0.33 | -0.31 | ||
59 | AT3G06500 | Plant neutral invertase family protein | alkaline/neutral invertase C | -0.72 | 0.32 | -0.31 | ||
60 | AT5G37540 | Eukaryotic aspartyl protease family protein | -0.72 | 0.32 | -0.33 | |||
61 | AT2G27500 | Glycosyl hydrolase superfamily protein | -0.72 | 0.32 | -0.34 | |||
62 | AT1G17380 | jasmonate-zim-domain protein 5 | jasmonate-zim-domain protein 5, TIFY11A |
-0.72 | 0.32 | -0.33 | ||
63 | AT4G15330 | cytochrome P450, family 705, subfamily A, polypeptide 1 | cytochrome P450, family 705, subfamily A, polypeptide 1 |
-0.72 | 0.31 | -0.3 | ||
64 | AT5G59490 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.72 | 0.31 | -0.32 | |||
65 | AT1G68765 | Putative membrane lipoprotein | INFLORESCENCE DEFICIENT IN ABSCISSION |
-0.72 | 0.3 | -0.32 | ||
66 | AT3G11840 | plant U-box 24 | plant U-box 24 | -0.71 | 0.32 | -0.29 | ||
67 | AT3G14270 | phosphatidylinositol-4-phosphate 5-kinase family protein | FORMS APLOID AND BINUCLEATE CELLS 1B |
-0.71 | 0.31 | -0.31 | ||
68 | AT4G29210 | gamma-glutamyl transpeptidase 4 | gamma-glutamyl transpeptidase 3, gamma-glutamyl transpeptidase 4 |
-0.71 | 0.33 | -0.3 | ||
69 | AT1G25400 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1); Has 21 Blast hits to 21 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.32 | -0.32 | |||
70 | AT1G70300 | K+ uptake permease 6 | K+ uptake permease 6 | -0.71 | 0.3 | -0.32 | ||
71 | AT4G24380 | INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.71 | 0.3 | -0.32 | |||
72 | AT1G61120 | terpene synthase 04 | GERANYLLINALOOL SYNTHASE, terpene synthase 04, TERPENE SYNTHASE 4 |
-0.71 | 0.31 | -0.31 | ||
73 | AT1G24330 | ARM repeat superfamily protein | -0.71 | 0.32 | -0.33 | |||
74 | AT1G77420 | alpha/beta-Hydrolases superfamily protein | -0.71 | 0.32 | -0.32 | |||
75 | AT2G34600 | jasmonate-zim-domain protein 7 | jasmonate-zim-domain protein 7, TIFY5B |
-0.71 | 0.32 | -0.32 | ||
76 | AT1G32640 | Basic helix-loop-helix (bHLH) DNA-binding family protein | ATMYC2, JASMONATE INSENSITIVE 1, JASMONATE INSENSITIVE 1, MYC2, RD22BP1, ZBF1 |
-0.71 | 0.31 | -0.31 | ||
77 | AT4G35600 | Protein kinase superfamily protein | CAST AWAY, CONNEXIN 32, kinase 4 | -0.7 | 0.31 | -0.3 | ||
78 | AT3G13110 | serine acetyltransferase 2;2 | serine acetyltransferase 2;2, SERINE ACETYLTRANSFERASE-1, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE 3, serine acetyltransferase 2;2 |
-0.7 | 0.31 | -0.3 | ||
79 | AT2G39030 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | N-acetyltransferase activity 1 | -0.7 | 0.33 | -0.32 | ||
80 | AT1G72520 | PLAT/LH2 domain-containing lipoxygenase family protein | Arabidopsis thaliana lipoxygenase 4, lipoxygenase 4 |
-0.7 | 0.33 | -0.31 | ||
81 | AT1G50410 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
-0.7 | 0.32 | -0.29 | |||
82 | AT5G45110 | NPR1-like protein 3 | ATNPR3, NPR1-like protein 3 | -0.7 | 0.32 | -0.31 | ||
83 | AT2G02970 | GDA1/CD39 nucleoside phosphatase family protein | -0.69 | 0.3 | -0.31 | |||
84 | AT1G29760 | Putative adipose-regulatory protein (Seipin) | -0.69 | 0.35 | -0.32 | |||
85 | AT2G41480 | Peroxidase superfamily protein | -0.69 | 0.31 | -0.32 | |||
86 | AT2G22760 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.69 | 0.32 | -0.3 | |||
87 | AT5G27420 | carbon/nitrogen insensitive 1 | ATL31, carbon/nitrogen insensitive 1 |
-0.69 | 0.31 | -0.32 | ||
88 | AT2G41640 | Glycosyltransferase family 61 protein | -0.68 | 0.31 | -0.32 | |||
89 | AT4G39670 | Glycolipid transfer protein (GLTP) family protein | -0.68 | 0.32 | -0.3 | |||
90 | AT2G35980 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
ARABIDOPSIS NDR1/HIN1-LIKE 10, NDR1/HIN1-LIKE, YELLOW-LEAF-SPECIFIC GENE 9 |
-0.68 | 0.3 | -0.3 | ||
91 | AT3G25180 | cytochrome P450, family 82, subfamily G, polypeptide 1 | cytochrome P450, family 82, subfamily G, polypeptide 1 |
-0.68 | 0.28 | -0.33 | ||
92 | AT2G33580 | Protein kinase superfamily protein | -0.68 | 0.3 | -0.32 | |||
93 | AT3G51970 | acyl-CoA sterol acyl transferase 1 | acyl-CoA sterol acyl transferase 1, ATASAT1, ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1 |
-0.68 | 0.31 | -0.29 | ||
94 | AT3G59660 | C2 domain-containing protein / GRAM domain-containing protein |
-0.68 | 0.31 | -0.33 | |||
95 | AT1G24440 | RING/U-box superfamily protein | -0.68 | 0.29 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
96 | C0134 | Kaempferol-7-O-neohesperidoside | - | - | - | 0.85 | 0.44 | -0.43 |