AT2G43640 : -
Query Information
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AGICode AT2G43640
Description Signal recognition particle, SRP9/SRP14 subunit
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 1 0.32 -0.31
2 AT1G04480 Ribosomal protein L14p/L23e family protein 0.88 0.33 -0.32
3 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.88 0.3 -0.33
4 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.86 0.32 -0.31
5 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.86 0.32 -0.31
6 AT2G44120 Ribosomal protein L30/L7 family protein 0.84 0.32 -0.29
7 AT1G75560 zinc knuckle (CCHC-type) family protein 0.84 0.31 -0.33
8 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.84 0.31 -0.32
9 AT1G14810 semialdehyde dehydrogenase family protein 0.83 0.3 -0.3
10 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.83 0.31 -0.29
11 AT5G47700 60S acidic ribosomal protein family 0.83 0.3 -0.32
12 AT3G09200 Ribosomal protein L10 family protein 0.83 0.31 -0.31
13 AT4G39920 C-CAP/cofactor C-like domain-containing protein PORCINO, TUBULIN-FOLDING COFACTOR
C		 0.83 0.3 -0.32
14 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.83 0.3 -0.31
15 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.82 0.32 -0.29
16 AT1G53530 Peptidase S24/S26A/S26B/S26C family protein 0.82 0.33 -0.32
17 AT5G57290 60S acidic ribosomal protein family 0.82 0.31 -0.31
18 AT4G09720 RAB GTPase homolog G3A RAB GTPase homolog G3A, RAB GTPase
homolog G3A		 0.82 0.31 -0.34
19 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.82 0.3 -0.3
20 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 0.82 0.33 -0.31
21 AT3G51600 lipid transfer protein 5 lipid transfer protein 5 0.82 0.31 -0.31
22 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit 0.81 0.31 -0.32
23 AT5G44130 FASCICLIN-like arabinogalactan protein 13 precursor FASCICLIN-like arabinogalactan
protein 13 precursor		 0.81 0.32 -0.31
24 AT3G48570 secE/sec61-gamma protein transport protein 0.81 0.31 -0.3
25 AT4G35490 mitochondrial ribosomal protein L11 mitochondrial ribosomal protein
L11		 0.81 0.32 -0.31
26 AT2G46230 PIN domain-like family protein 0.81 0.31 -0.33
27 AT2G24765 ADP-ribosylation factor 3 ADP-ribosylation factor 3,
ARF-LIKE 1, ARF-LIKE 1		 0.81 0.32 -0.31
28 AT5G25080 Sas10/Utp3/C1D family 0.81 0.32 -0.31
29 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.81 0.31 -0.32
30 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.81 0.32 -0.29
31 AT5G23870 Pectinacetylesterase family protein 0.8 0.33 -0.31
32 AT2G32220 Ribosomal L27e protein family 0.8 0.3 -0.34
33 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.8 0.3 -0.33
34 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.8 0.31 -0.31
35 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.8 0.3 -0.29
36 AT1G77750 Ribosomal protein S13/S18 family 0.8 0.32 -0.31
37 AT3G06790 plastid developmental protein DAG, putative 0.79 0.32 -0.33
38 AT1G14980 chaperonin 10 chaperonin 10 0.79 0.32 -0.31
39 AT5G17560 BolA-like family protein 0.79 0.32 -0.31
40 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.79 0.31 -0.33
41 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP 0.78 0.3 -0.31
42 AT5G42970 Proteasome component (PCI) domain protein ATS4, CONSTITUTIVE
PHOTOMORPHOGENIC 14, CONSTITUTIVE
PHOTOMORPHOGENIC 8, COP9
SIGNALOSOME SUBUNIT 4, EMBRYO
DEFECTIVE 134, FUSCA 4, FUSCA 8		 0.78 0.33 -0.31
43 AT2G18290 anaphase promoting complex 10 anaphase promoting complex 10,
EMBRYO DEFECTIVE 2783		 0.78 0.32 -0.32
44 AT1G26160 Metal-dependent phosphohydrolase 0.78 0.31 -0.29
45 AT1G20770 unknown protein; Has 59 Blast hits to 59 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.32 -0.33
46 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 0.78 0.31 -0.34
47 AT1G31500 DNAse I-like superfamily protein 0.78 0.29 -0.3
48 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 0.78 0.31 -0.32
49 AT3G05000 Transport protein particle (TRAPP) component 0.78 0.32 -0.34
50 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.78 0.32 -0.32
51 AT2G38800 Plant calmodulin-binding protein-related -0.78 0.33 -0.32
52 AT1G66070 Translation initiation factor eIF3 subunit 0.77 0.31 -0.32
53 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.77 0.3 -0.32
54 AT1G13870 calmodulin binding;purine nucleotide binding AtKTI12, DEFORMED ROOTS AND LEAVES
1		 0.77 0.32 -0.32
55 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 0.77 0.31 -0.3
56 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.77 0.32 -0.3
57 AT5G05010 clathrin adaptor complexes medium subunit family protein 0.77 0.33 -0.32
58 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.77 0.32 -0.31
59 AT1G61740 Sulfite exporter TauE/SafE family protein 0.77 0.32 -0.32
60 AT5G28520 Mannose-binding lectin superfamily protein -0.77 0.3 -0.31
61 AT5G05990 Mitochondrial glycoprotein family protein 0.77 0.31 -0.31
62 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.77 0.32 -0.3
63 AT3G19360 Zinc finger (CCCH-type) family protein 0.77 0.3 -0.29
64 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.77 0.3 -0.33
65 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.76 0.3 -0.31
66 AT1G08930 Major facilitator superfamily protein EARLY RESPONSE TO DEHYDRATION 6 0.76 0.32 -0.3
67 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 0.76 0.33 -0.31
68 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.76 0.32 -0.32
69 AT2G30410 tubulin folding cofactor A (KIESEL) KIESEL, TUBULIN FOLDING FACTOR A 0.76 0.31 -0.32
70 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.76 0.32 -0.32
71 AT5G23290 prefoldin 5 prefoldin 5 0.76 0.31 -0.31
72 AT2G20690 lumazine-binding family protein 0.76 0.32 -0.32
73 AT5G58030 Transport protein particle (TRAPP) component 0.76 0.3 -0.32
74 AT1G64090 Reticulan like protein B3 Reticulan like protein B3 0.76 0.31 -0.31
75 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.76 0.34 -0.34
76 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.76 0.3 -0.32
77 AT2G46170 Reticulon family protein 0.76 0.31 -0.32
78 AT2G27030 calmodulin 5 ACAM-2, calmodulin 5 0.76 0.31 -0.34
79 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.74 0.32 -0.33
80 AT4G38350 Patched family protein -0.72 0.31 -0.31
81 AT3G20120 cytochrome P450, family 705, subfamily A, polypeptide 21 cytochrome P450, family 705,
subfamily A, polypeptide 21		 -0.72 0.29 -0.33
82 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.72 0.31 -0.32
83 AT1G77800 PHD finger family protein -0.71 0.33 -0.32
84 AT2G25790 Leucine-rich receptor-like protein kinase family protein -0.71 0.29 -0.31
85 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.71 0.3 -0.31
86 AT5G22850 Eukaryotic aspartyl protease family protein -0.7 0.31 -0.3
87 AT3G49810 ARM repeat superfamily protein -0.69 0.31 -0.31
88 AT1G02080 transcription regulators -0.69 0.32 -0.29
89 AT1G09910 Rhamnogalacturonate lyase family protein -0.69 0.29 -0.33
90 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 -0.69 0.3 -0.3
91 AT2G01580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits
to 129 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.31
92 AT5G18830 squamosa promoter binding protein-like 7 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 7, squamosa promoter
binding protein-like 7		 -0.68 0.31 -0.32
93 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.67 0.34 -0.3
94 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.67 0.34 -0.33
95 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.67 0.32 -0.32
96 AT5G05160 Leucine-rich repeat protein kinase family protein REDUCED IN LATERAL GROWTH1 -0.67 0.32 -0.33
97 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.66 0.35 -0.31
98 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.66 0.3 -0.34
99 AT5G62090 SEUSS-like 2 SEUSS-like 2 -0.66 0.31 -0.33
100 AT1G49450 Transducin/WD40 repeat-like superfamily protein -0.66 0.32 -0.29
101 AT2G12400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in
23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi -
0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.66 0.32 -0.31
102 AT3G09910 RAB GTPase homolog C2B ATRAB18C, RAB GTPase homolog C2B,
RAB GTPase homolog C2B		 -0.65 0.31 -0.3
103 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE -0.65 0.32 -0.3
104 AT5G40640 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 7 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.64 0.31 -0.33
105 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 -0.64 0.31 -0.29
106 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.64 0.31 -0.32
107 AT4G26180 Mitochondrial substrate carrier family protein -0.64 0.31 -0.33
108 AT1G02700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink).		 -0.63 0.29 -0.34
109 AT2G03140 alpha/beta-Hydrolases superfamily protein -0.62 0.31 -0.33
110 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 -0.62 0.31 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.86 0.48 -0.45 C0123
112 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.82 0.44 -0.44
113 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.77 0.46 -0.45 C0266