AGICode | AT2G43630 |
Description | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G43630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). |
1 | 0.32 | -0.33 | |||
2 | AT2G31170 | Cysteinyl-tRNA synthetase, class Ia family protein | FIONA, cysteinyl t-RNA synthetase | 0.93 | 0.29 | -0.32 | ||
3 | AT1G06190 | Rho termination factor | 0.88 | 0.32 | -0.3 | |||
4 | AT4G02990 | Mitochondrial transcription termination factor family protein |
BELAYA SMERT, RUGOSA 2 | 0.87 | 0.32 | -0.32 | ||
5 | AT2G23670 | homolog of Synechocystis YCF37 | homolog of Synechocystis YCF37 | 0.87 | 0.31 | -0.29 | ||
6 | AT1G56050 | GTP-binding protein-related | 0.86 | 0.31 | -0.28 | |||
7 | AT2G41950 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 24 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.86 | 0.33 | -0.31 | |||
8 | AT1G33810 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.86 | 0.33 | -0.31 | |||
9 | AT2G39670 | Radical SAM superfamily protein | 0.86 | 0.34 | -0.31 | |||
10 | AT5G20720 | chaperonin 20 | ATCPN21, CHLOROPLAST CHAPERONIN 10, CHLOROPLAST CHAPERONIN 10, chaperonin 20, CPN21 |
0.86 | 0.3 | -0.31 | ||
11 | AT5G24020 | septum site-determining protein (MIND) | ACCUMULATION AND REPLICATION OF CHLOROPLASTS 11, ATMIND1, MIND |
0.86 | 0.29 | -0.31 | ||
12 | AT3G59980 | Nucleic acid-binding, OB-fold-like protein | 0.86 | 0.32 | -0.32 | |||
13 | AT5G63570 | glutamate-1-semialdehyde-2,1-aminomutase | glutamate-1-semialdehyde-2,1-amino mutase |
0.85 | 0.33 | -0.3 | ||
14 | AT3G13470 | TCP-1/cpn60 chaperonin family protein | chaperonin-60beta2 | 0.85 | 0.34 | -0.31 | ||
15 | AT2G43710 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
FATTY ACID BIOSYNTHESIS 2, suppressor of SA insensitive 2 |
0.85 | 0.32 | -0.31 | ||
16 | AT3G63410 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
ALBINO OR PALE GREEN MUTANT 1, E37, INNER ENVELOPE PROTEIN 37, VITAMIN E DEFECTIVE 3 |
0.85 | 0.3 | -0.34 | ||
17 | AT5G55280 | homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 | ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, CHLOROPLAST FTSZ, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 |
0.85 | 0.31 | -0.32 | ||
18 | AT3G08740 | elongation factor P (EF-P) family protein | 0.84 | 0.32 | -0.33 | |||
19 | AT4G35450 | ankyrin repeat-containing protein 2 | AFT, ankyrin repeat-containing protein 2, AKR2A |
0.84 | 0.35 | -0.33 | ||
20 | AT1G08880 | Histone superfamily protein | GAMMA H2AX, gamma histone variant H2AX, H2AXA, histone H2A 5 |
0.84 | 0.33 | -0.31 | ||
21 | AT2G28000 | chaperonin-60alpha | CHLOROPLAST CHAPERONIN 60ALPHA, chaperonin-60alpha, chaperonin-60alpha1, SCHLEPPERLESS |
0.84 | 0.29 | -0.32 | ||
22 | AT3G07430 | YGGT family protein | ATYLMG1-1, embryo defective 1990, YLMG1-1 |
0.84 | 0.31 | -0.33 | ||
23 | AT3G13740 | Ribonuclease III family protein | 0.84 | 0.32 | -0.31 | |||
24 | AT1G58030 | cationic amino acid transporter 2 | cationic amino acid transporter 2 | -0.83 | 0.32 | -0.31 | ||
25 | AT1G71750 | Hypoxanthine-guanine phosphoribosyltransferase | Hypoxanthine-guanine phosphoribosyltransferase |
0.83 | 0.34 | -0.34 | ||
26 | AT2G18290 | anaphase promoting complex 10 | anaphase promoting complex 10, EMBRYO DEFECTIVE 2783 |
0.83 | 0.33 | -0.32 | ||
27 | AT4G18070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.83 | 0.34 | -0.3 | |||
28 | AT4G28210 | embryo defective 1923 | embryo defective 1923 | 0.83 | 0.32 | -0.32 | ||
29 | AT2G22230 | Thioesterase superfamily protein | 0.83 | 0.32 | -0.31 | |||
30 | AT2G47840 | Uncharacterised conserved protein ycf60 | translocon at the inner envelope membrane of chloroplasts 20-II, translocon at the inner envelope membrane of chloroplasts 20-II |
0.83 | 0.29 | -0.32 | ||
31 | AT5G64816 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.82 | 0.31 | -0.3 | |||
32 | AT1G15140 | FAD/NAD(P)-binding oxidoreductase | 0.82 | 0.31 | -0.32 | |||
33 | AT1G23290 | Ribosomal protein L18e/L15 superfamily protein | RIBOSOMAL PROTEIN L27A, RPL27AB | 0.82 | 0.32 | -0.32 | ||
34 | AT1G69740 | Aldolase superfamily protein | HEMB1 | 0.82 | 0.32 | -0.33 | ||
35 | AT4G39280 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
0.82 | 0.33 | -0.31 | |||
36 | AT5G49910 | chloroplast heat shock protein 70-2 | chloroplast heat shock protein 70-2, HEAT SHOCK PROTEIN 70-7 |
0.82 | 0.32 | -0.29 | ||
37 | AT3G10520 | haemoglobin 2 | haemoglobin 2, ARATH GLB2, ARABIDOPSIS HEMOGLOBIN 2, HEMOGLOBIN 2, haemoglobin 2, NON-SYMBIOTIC HAEMOGLOBIN 2 |
0.82 | 0.32 | -0.32 | ||
38 | AT2G02740 | ssDNA-binding transcriptional regulator | A. THALIANA WHIRLY 3, PLASTID TRANSCRIPTIONALLY ACTIVE11, WHIRLY 3 |
0.82 | 0.31 | -0.31 | ||
39 | AT4G09730 | RH39 | RH39 | 0.82 | 0.32 | -0.29 | ||
40 | AT1G18440 | Peptidyl-tRNA hydrolase family protein | 0.82 | 0.32 | -0.33 | |||
41 | AT3G23710 | Tic22-like family protein | translocon at the inner envelope membrane of chloroplasts 22-III, translocon at the inner envelope membrane of chloroplasts 22-III |
0.82 | 0.31 | -0.31 | ||
42 | AT5G17710 | Co-chaperone GrpE family protein | embryo defective 1241 | 0.82 | 0.32 | -0.34 | ||
43 | AT2G38800 | Plant calmodulin-binding protein-related | -0.82 | 0.3 | -0.3 | |||
44 | AT2G42770 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | 0.81 | 0.32 | -0.31 | |||
45 | AT5G41970 | Metal-dependent protein hydrolase | 0.81 | 0.31 | -0.3 | |||
46 | AT1G74960 | fatty acid biosynthesis 1 | ARABIDOPSIS BETA-KETOACYL-ACP SYNTHETASE 2, fatty acid biosynthesis 1, BETA-KETOACYL-ACP SYNTHETASE 2 |
0.81 | 0.32 | -0.32 | ||
47 | AT1G14320 | Ribosomal protein L16p/L10e family protein | ribosomal protein L10, ribosomal protein L10 A, SUPPRESSOR OF ACAULIS 52 |
0.81 | 0.3 | -0.31 | ||
48 | AT5G24650 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
0.81 | 0.31 | -0.29 | |||
49 | AT1G13870 | calmodulin binding;purine nucleotide binding | AtKTI12, DEFORMED ROOTS AND LEAVES 1 |
0.81 | 0.33 | -0.32 | ||
50 | AT1G75560 | zinc knuckle (CCHC-type) family protein | 0.81 | 0.31 | -0.31 | |||
51 | AT2G40980 | Protein kinase superfamily protein | 0.81 | 0.31 | -0.29 | |||
52 | AT1G48830 | Ribosomal protein S7e family protein | 0.81 | 0.32 | -0.31 | |||
53 | AT5G28840 | GDP-D-mannose 3',5'-epimerase | GDP-D-mannose 3',5'-epimerase | 0.81 | 0.32 | -0.32 | ||
54 | AT1G31500 | DNAse I-like superfamily protein | 0.81 | 0.33 | -0.33 | |||
55 | AT5G44340 | tubulin beta chain 4 | tubulin beta chain 4 | 0.81 | 0.3 | -0.33 | ||
56 | AT2G22660 | Protein of unknown function (duplicated DUF1399) | -0.81 | 0.3 | -0.32 | |||
57 | AT1G52670 | Single hybrid motif superfamily protein | 0.8 | 0.31 | -0.33 | |||
58 | AT5G04430 | binding to TOMV RNA 1L (long form) | BINDING TO TOMV RNA 1, binding to TOMV RNA 1L (long form), BINDING TO TOMV RNA 1S (SHORT FORM) |
0.8 | 0.33 | -0.32 | ||
59 | AT2G30980 | SHAGGY-related protein kinase dZeta | SHAGGY-related protein kinase dZeta, A. THALIANA SHAGGY-LIKE KINASE GROUP 2 2, SHAGGY-LIKE PROTEIN KINASE 23, BIN2-LIKE 1, SHAGGY-related protein kinase dZeta |
0.8 | 0.33 | -0.32 | ||
60 | AT3G49990 | unknown protein; Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9; Bacteria - 84; Metazoa - 474; Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes - 658 (source: NCBI BLink). |
0.8 | 0.33 | -0.34 | |||
61 | AT5G41950 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.8 | 0.32 | -0.3 | |||
62 | AT4G18040 | eukaryotic translation initiation factor 4E | ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITATION FACTOR 4E1, CUCUMOVIRUS MULTIPLICATION 1, eukaryotic translation initiation factor 4E, eukaryotic translation Initiation Factor 4E1 |
0.8 | 0.31 | -0.31 | ||
63 | AT5G06980 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.8 | 0.34 | -0.3 | |||
64 | AT1G53120 | RNA-binding S4 domain-containing protein | 0.8 | 0.31 | -0.31 | |||
65 | AT2G22870 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
embryo defective 2001 | 0.8 | 0.31 | -0.34 | ||
66 | AT3G17210 | heat stable protein 1 | A. THALIANA HEAT STABLE PROTEIN 1, heat stable protein 1 |
0.8 | 0.31 | -0.32 | ||
67 | AT1G08640 | Chloroplast J-like domain 1 | Chloroplast J-like domain 1 | 0.8 | 0.3 | -0.31 | ||
68 | AT2G03050 | Mitochondrial transcription termination factor family protein |
EMBRYO DEFECTIVE 93, SINGLET OXYGEN-LINKED DEATH ACTIVATOR 10 |
0.79 | 0.34 | -0.32 | ||
69 | AT3G07170 | Sterile alpha motif (SAM) domain-containing protein | 0.79 | 0.31 | -0.31 | |||
70 | AT5G24300 | Glycogen/starch synthases, ADP-glucose type | STARCH SYNTHASE 1, starch synthase 1 |
0.79 | 0.32 | -0.29 | ||
71 | AT1G20010 | tubulin beta-5 chain | tubulin beta-5 chain | 0.79 | 0.32 | -0.3 | ||
72 | AT2G35650 | cellulose synthase like | cellulose synthase like, ATCSLA7, CSLA07, cellulose synthase like, CELLULOSE SYNTHASE LIKE A7 |
0.79 | 0.31 | -0.31 | ||
73 | AT1G21540 | AMP-dependent synthetase and ligase family protein | 0.79 | 0.32 | -0.29 | |||
74 | AT3G61770 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
0.79 | 0.29 | -0.33 | |||
75 | AT5G59180 | DNA-directed RNA polymerase II | NRPB7 | 0.79 | 0.3 | -0.32 | ||
76 | AT2G25790 | Leucine-rich receptor-like protein kinase family protein | -0.79 | 0.33 | -0.31 | |||
77 | AT4G39960 | Molecular chaperone Hsp40/DnaJ family protein | 0.79 | 0.32 | -0.33 | |||
78 | AT1G65660 | Pre-mRNA splicing Prp18-interacting factor | SWELLMAP 1 | -0.79 | 0.32 | -0.29 | ||
79 | AT1G63440 | heavy metal atpase 5 | heavy metal atpase 5 | -0.78 | 0.31 | -0.31 | ||
80 | AT1G23120 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.77 | 0.31 | -0.3 | |||
81 | AT5G18780 | F-box/RNI-like superfamily protein | -0.77 | 0.3 | -0.29 | |||
82 | AT2G18370 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.75 | 0.3 | -0.32 | |||
83 | AT5G28510 | beta glucosidase 24 | beta glucosidase 24 | -0.75 | 0.33 | -0.34 | ||
84 | AT1G08460 | histone deacetylase 8 | ATHDA8, histone deacetylase 8, HISTONE DEACETYLASE 8 |
-0.73 | 0.3 | -0.3 | ||
85 | AT3G16857 | response regulator 1 | response regulator 1, response regulator 1 |
-0.73 | 0.32 | -0.32 | ||
86 | AT3G20120 | cytochrome P450, family 705, subfamily A, polypeptide 21 | cytochrome P450, family 705, subfamily A, polypeptide 21 |
-0.72 | 0.31 | -0.31 | ||
87 | AT3G23640 | heteroglycan glucosidase 1 | heteroglycan glucosidase 1 | -0.72 | 0.32 | -0.3 | ||
88 | AT5G37540 | Eukaryotic aspartyl protease family protein | -0.72 | 0.3 | -0.31 | |||
89 | AT1G30270 | CBL-interacting protein kinase 23 | ATCIPK23, CBL-interacting protein kinase 23, LOW-K+-SENSITIVE 1, SOS2-like protein kinase 17, SNF1-RELATED PROTEIN KINASE 3.23 |
-0.72 | 0.33 | -0.33 | ||
90 | AT2G04940 | scramblase-related | -0.72 | 0.32 | -0.31 | |||
91 | AT5G63560 | HXXXD-type acyl-transferase family protein | -0.71 | 0.34 | -0.31 | |||
92 | AT2G30500 | Kinase interacting (KIP1-like) family protein | -0.71 | 0.33 | -0.3 | |||
93 | AT5G53990 | UDP-Glycosyltransferase superfamily protein | -0.71 | 0.32 | -0.31 | |||
94 | AT3G61990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
O-MTase family 3 protein | -0.7 | 0.34 | -0.3 | ||
95 | AT1G66950 | pleiotropic drug resistance 11 | ATP-binding cassette G39, PLEIOTROPIC DRUG RESISTANCE 11, pleiotropic drug resistance 11 |
-0.69 | 0.31 | -0.32 | ||
96 | AT5G65660 | hydroxyproline-rich glycoprotein family protein | -0.69 | 0.34 | -0.3 | |||
97 | AT3G58550 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.68 | 0.32 | -0.33 | |||
98 | AT5G18170 | glutamate dehydrogenase 1 | glutamate dehydrogenase 1 | -0.68 | 0.36 | -0.33 | ||
99 | AT1G14790 | RNA-dependent RNA polymerase 1 | ATRDRP1, RNA-dependent RNA polymerase 1 |
-0.68 | 0.32 | -0.33 | ||
100 | AT1G59740 | Major facilitator superfamily protein | -0.68 | 0.31 | -0.3 | |||
101 | AT3G44540 | fatty acid reductase 4 | fatty acid reductase 4 | -0.68 | 0.31 | -0.3 | ||
102 | AT5G25770 | alpha/beta-Hydrolases superfamily protein | -0.68 | 0.33 | -0.32 | |||
103 | AT4G27260 | Auxin-responsive GH3 family protein | GH3.5, WES1 | -0.68 | 0.34 | -0.3 | ||
104 | AT2G15230 | lipase 1 | lipase 1, lipase 1 | -0.67 | 0.31 | -0.32 | ||
105 | AT4G23980 | auxin response factor 9 | auxin response factor 9 | -0.67 | 0.32 | -0.34 | ||
106 | AT1G77420 | alpha/beta-Hydrolases superfamily protein | -0.67 | 0.3 | -0.31 | |||
107 | AT1G80440 | Galactose oxidase/kelch repeat superfamily protein | -0.67 | 0.32 | -0.3 | |||
108 | AT2G18360 | alpha/beta-Hydrolases superfamily protein | -0.66 | 0.34 | -0.31 | |||
109 | AT2G22680 | Zinc finger (C3HC4-type RING finger) family protein | WAV3 homolog 1 | -0.65 | 0.31 | -0.3 | ||
110 | AT1G55240 | Family of unknown function (DUF716) | -0.65 | 0.31 | -0.32 | |||
111 | AT3G19100 | Protein kinase superfamily protein | -0.65 | 0.33 | -0.33 | |||
112 | AT1G05577 | Domain of unknown function (DUF966) | -0.65 | 0.33 | -0.31 | |||
113 | AT5G60890 | myb domain protein 34 | ATMYB34, ALTERED TRYPTOPHAN REGULATION 1, myb domain protein 34 |
-0.65 | 0.32 | -0.29 |