AT1G53400 : -
Query Information
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AGICode AT1G53400
Description Ubiquitin domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G53400 Ubiquitin domain-containing protein 1 0.3 -0.32
2 AT5G02810 pseudo-response regulator 7 APRR7, pseudo-response regulator 7 0.78 0.32 -0.32
3 AT1G56300 Chaperone DnaJ-domain superfamily protein 0.76 0.33 -0.3
4 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 0.76 0.33 -0.27
5 AT5G42900 cold regulated gene 27 cold regulated gene 27 0.75 0.33 -0.31
6 AT5G57660 CONSTANS-like 5 ATCOL5, CONSTANS-like 5 0.75 0.31 -0.33
7 AT5G36250 Protein phosphatase 2C family protein 0.74 0.33 -0.33
8 AT1G76580 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.74 0.31 -0.33
9 AT3G06410 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.74 0.34 -0.32
10 AT5G13950 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits
to 145 proteins in 44 species: Archae - 0; Bacteria - 2;
Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.73 0.31 -0.31
11 AT1G53050 Protein kinase superfamily protein 0.72 0.32 -0.28
12 AT1G22770 gigantea protein (GI) FB, GIGANTEA 0.72 0.31 -0.33
13 AT1G18700 DNAJ heat shock N-terminal domain-containing protein 0.72 0.3 -0.3
14 AT1G47710 Serine protease inhibitor (SERPIN) family protein 0.72 0.33 -0.33
15 AT4G22270 Protein of unknown function (DUF3537) ARABIDOPSIS MEMBRANE RELATED
BIGGER1, MEMBRANE RELATED BIGGER1		 0.71 0.32 -0.32
16 AT1G04400 cryptochrome 2 AT-PHH1, ATCRY2, cryptochrome 2,
FHA, PHH1		 0.7 0.31 -0.29
17 AT3G09320 DHHC-type zinc finger family protein 0.7 0.35 -0.31
18 AT1G65220 ARM repeat superfamily protein 0.7 0.31 -0.32
19 AT5G48250 B-box type zinc finger protein with CCT domain 0.69 0.32 -0.33
20 AT1G77600 ARM repeat superfamily protein 0.69 0.3 -0.32
21 AT5G23610 BEST Arabidopsis thaliana protein match is: SWITCH1
(TAIR:AT5G51330.1); Has 170 Blast hits to 162 proteins in
36 species: Archae - 3; Bacteria - 6; Metazoa - 6; Fungi -
4; Plants - 117; Viruses - 0; Other Eukaryotes - 34
(source: NCBI BLink).		 0.69 0.32 -0.3
22 AT3G07740 homolog of yeast ADA2 2A homolog of yeast ADA2 2A, ATADA2A,
HAC10, HXA02, HXA2		 0.68 0.31 -0.31
23 AT2G40930 ubiquitin-specific protease 5 ATUBP5, PIGMENT DEFECTIVE EMBRYO
323, ubiquitin-specific protease 5		 0.68 0.3 -0.32
24 AT5G66810 CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif
(InterPro:IPR006595); BEST Arabidopsis thaliana protein
match is: LisH and RanBPM domains containing protein
(TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in
88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi
- 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink).		 0.68 0.3 -0.31
25 AT3G58640 Mitogen activated protein kinase kinase kinase-related 0.68 0.31 -0.32
26 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 0.68 0.31 -0.3
27 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 0.68 0.32 -0.33
28 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 -0.68 0.32 -0.31
29 AT3G16830 TOPLESS-related 2 TOPLESS-related 2 0.67 0.33 -0.32
30 AT5G52580 RabGAP/TBC domain-containing protein 0.67 0.31 -0.31
31 AT3G18040 MAP kinase 9 MAP kinase 9 0.67 0.31 -0.32
32 AT1G14580 C2H2-like zinc finger protein 0.67 0.33 -0.33
33 AT1G55690 Sec14p-like phosphatidylinositol transfer family protein 0.67 0.32 -0.3
34 AT5G64170 dentin sialophosphoprotein-related 0.67 0.31 -0.32
35 AT3G19840 pre-mRNA-processing protein 40C pre-mRNA-processing protein 40C,
pre-mRNA-processing protein 40C		 0.67 0.31 -0.32
36 AT4G25500 arginine/serine-rich splicing factor 35 arginine/serine-rich splicing
factor 40, AT-SRP40, ARABIDOPSIS
THALIANA ARGININE/SERINE-RICH
SPLICING FACTOR 35, ATRSP40,
arginine/serine-rich splicing
factor 40, arginine/serine-rich
splicing factor 35		 0.67 0.33 -0.3
37 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.67 0.34 -0.33
38 AT1G64890 Major facilitator superfamily protein 0.67 0.32 -0.32
39 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.67 0.32 -0.32
40 AT1G53590 Calcium-dependent lipid-binding (CaLB domain) family
protein		 NTMC2T6.1, NTMC2TYPE6.1 0.66 0.3 -0.31
41 AT2G18915 LOV KELCH protein 2 ADAGIO 2, LOV KELCH protein 2 0.66 0.32 -0.3
42 AT3G21650 Protein phosphatase 2A regulatory B subunit family protein 0.66 0.31 -0.33
43 AT4G09150 T-complex protein 11 0.66 0.31 -0.31
44 AT4G28260 unknown protein; Has 50 Blast hits to 42 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.3 -0.3
45 AT1G30510 root FNR 2 root FNR 2, root FNR 2 -0.66 0.34 -0.34
46 AT1G13950 eukaryotic elongation factor 5A-1 EUKARYOTIC ELONGATION FACTOR 5A-1,
EIF-5A, EUKARYOTIC ELONGATION
FACTOR 5A, eukaryotic elongation
factor 5A-1		 -0.66 0.31 -0.32
47 AT5G55170 small ubiquitin-like modifier 3 ATSUMO3, SMALL UBIQUITIN-LIKE
MODIFIER 3, SMALL UBIQUITIN-LIKE
MODIFIER 3, small ubiquitin-like
modifier 3		 -0.66 0.29 -0.33
48 AT4G27750 binding IMPAIRED SUCROSE INDUCTION 1 0.66 0.33 -0.31
49 AT1G04300 TRAF-like superfamily protein 0.65 0.31 -0.31
50 AT4G31140 O-Glycosyl hydrolases family 17 protein 0.65 0.31 -0.31
51 AT4G24260 glycosyl hydrolase 9A3 glycosyl hydrolase 9A3, glycosyl
hydrolase 9A3, KOR3		 -0.65 0.3 -0.31
52 AT4G23920 UDP-D-glucose/UDP-D-galactose 4-epimerase 2 UDP-GLC 4-EPIMERASE 2,
UDP-D-glucose/UDP-D-galactose
4-epimerase 2		 0.65 0.3 -0.32
53 AT5G20610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits
to 759 proteins in 180 species: Archae - 6; Bacteria - 105;
Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other
Eukaryotes - 282 (source: NCBI BLink).		 0.65 0.32 -0.31
54 AT1G31870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol, nucleus; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2050,
pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303
Blast hits to 9618 proteins in 489 species: Archae - 8;
Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942;
Viruses - 128; Other Eukaryotes - 2334 (source: NCBI
BLink).		 0.65 0.33 -0.34
55 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.31 -0.32
56 AT5G02840 LHY/CCA1-like 1 LHY/CCA1-like 1 0.64 0.3 -0.32
57 AT1G10090 Early-responsive to dehydration stress protein (ERD4) 0.64 0.31 -0.32
58 AT1G51610 Cation efflux family protein 0.64 0.31 -0.3
59 AT2G20480 unknown protein; Has 19 Blast hits to 19 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.3 -0.32
60 AT3G47950 H(+)-ATPase 4 H(+)-ATPase 4, H(+)-ATPase 4 -0.64 0.3 -0.32
61 AT4G20300 Protein of unknown function (DUF1639) 0.64 0.31 -0.32
62 AT1G64050 unknown protein; Has 524 Blast hits to 342 proteins in 101
species: Archae - 0; Bacteria - 106; Metazoa - 106; Fungi -
24; Plants - 25; Viruses - 0; Other Eukaryotes - 263
(source: NCBI BLink).		 0.64 0.33 -0.33
63 AT1G76185 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G20460.1); Has 37 Blast hits
to 37 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.32 -0.3
64 AT4G33980 BEST Arabidopsis thaliana protein match is: cold regulated
gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.33 -0.32
65 AT4G19420 Pectinacetylesterase family protein -0.64 0.34 -0.29
66 AT1G63980 D111/G-patch domain-containing protein 0.63 0.3 -0.3
67 AT1G17110 ubiquitin-specific protease 15 ubiquitin-specific protease 15 0.63 0.32 -0.3
68 AT3G06620 PAS domain-containing protein tyrosine kinase family
protein		 0.63 0.33 -0.33
69 AT1G47240 NRAMP metal ion transporter 2 ATNRAMP2, NRAMP metal ion
transporter 2		 0.63 0.3 -0.33
70 AT5G58600 Plant protein of unknown function (DUF828) POWDERY MILDEW RESISTANT 5,
TRICHOME BIREFRINGENCE-LIKE 44		 0.63 0.31 -0.3
71 AT1G72200 RING/U-box superfamily protein -0.63 0.3 -0.29
72 AT4G02480 AAA-type ATPase family protein 0.62 0.34 -0.3
73 AT1G77220 Protein of unknown function (DUF300) 0.62 0.32 -0.31
74 AT2G30800 helicase in vascular tissue and tapetum ATVT-1, helicase in vascular
tissue and tapetum		 0.62 0.36 -0.3
75 AT2G40650 PRP38 family protein 0.62 0.31 -0.31
76 AT1G03210 Phenazine biosynthesis PhzC/PhzF protein -0.62 0.31 -0.31
77 AT1G71030 MYB-like 2 ARABIDOPSIS MYB-LIKE 2, MYB-like 2 0.62 0.3 -0.33
78 AT2G02080 indeterminate(ID)-domain 4 indeterminate(ID)-domain 4,
indeterminate(ID)-domain 4		 0.62 0.31 -0.31
79 AT2G27285 Coiled-coil domain-containing protein 55 (DUF2040) 0.62 0.31 -0.3
80 AT3G06480 DEAD box RNA helicase family protein 0.62 0.33 -0.32
81 AT1G06390 GSK3/SHAGGY-like protein kinase 1 ATGSK1, A. THALIANA SHAGGY-LIKE
KINASE GROUP 2 3, SHAGGY-LIKE
PROTEIN KINASE 22, BIN2-LIKE 2,
GSK3/SHAGGY-like protein kinase 1,
SHAGGY-LIKE PROTEIN KINASE 22		 0.62 0.32 -0.34
82 AT1G68500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25422.1); Has 16 Blast hits
to 16 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.29 -0.32
83 AT3G53030 ser/arg-rich protein kinase 4 ser/arg-rich protein kinase 4 0.62 0.3 -0.28
84 AT3G62690 AtL5 AtL5 0.61 0.3 -0.32
85 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 -0.61 0.29 -0.32
86 AT4G13640 Homeodomain-like superfamily protein unfertilized embryo sac 16 0.61 0.3 -0.32
87 AT3G01310 Phosphoglycerate mutase-like family protein 0.61 0.31 -0.29
88 AT1G27070 5'-AMP-activated protein kinase-related 0.61 0.3 -0.31
89 AT1G57590 Pectinacetylesterase family protein -0.61 0.33 -0.34
90 AT1G03330 Small nuclear ribonucleoprotein family protein 0.61 0.32 -0.32
91 AT5G39850 Ribosomal protein S4 -0.61 0.32 -0.3
92 AT2G43190 ribonuclease P family protein 0.61 0.3 -0.33
93 AT3G03320 RNA-binding ASCH domain protein -0.6 0.33 -0.32
94 AT2G46420 Plant protein 1589 of unknown function -0.6 0.34 -0.31
95 AT4G22790 MATE efflux family protein -0.6 0.3 -0.31
96 AT3G13650 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.59 0.32 -0.34
97 AT1G53710 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.59 0.32 -0.3
98 AT1G20050 C-8,7 sterol isomerase HYDRA1 -0.58 0.32 -0.33
99 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.31
100 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 -0.58 0.31 -0.32
101 AT5G28020 cysteine synthase D2 CYSTEINE SYNTHASE D2, cysteine
synthase D2		 -0.58 0.32 -0.34
102 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.57 0.3 -0.3
103 AT5G26680 5'-3' exonuclease family protein -0.57 0.32 -0.33
104 AT1G20350 translocase inner membrane subunit 17-1 translocase inner membrane subunit
17-1, translocase inner membrane
subunit 17-1		 -0.57 0.31 -0.31
105 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.57 0.33 -0.32
106 AT1G34770 CONTAINS InterPro DOMAIN/s: MAGE protein
(InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins
in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104;
Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76
(source: NCBI BLink).		 -0.56 0.33 -0.32
107 AT5G42840 Cysteine/Histidine-rich C1 domain family protein -0.55 0.31 -0.3
108 AT2G02350 SKP1 interacting partner 3 Phloem protein 2-B9, SKP1
interacting partner 3		 -0.55 0.31 -0.32
109 AT4G12400 stress-inducible protein, putative Hop3 -0.55 0.28 -0.33
110 AT2G42390 protein kinase C substrate, heavy chain-related -0.53 0.33 -0.31
111 AT1G12400 Nucleotide excision repair, TFIIH, subunit TTDA -0.52 0.3 -0.34
112 AT4G20000 VQ motif-containing protein -0.52 0.32 -0.33
113 AT3G45530 Cysteine/Histidine-rich C1 domain family protein -0.52 0.33 -0.3
114 AT5G39020 Malectin/receptor-like protein kinase family protein -0.52 0.33 -0.31