AT1G55890 : -
Query Information
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AGICode AT1G55890
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G55890 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.32 -0.3
2 AT1G73230 Nascent polypeptide-associated complex NAC 0.86 0.29 -0.32
3 AT1G28395 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast
hits to 89 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.34 -0.31
4 AT2G20450 Ribosomal protein L14 0.85 0.3 -0.31
5 AT4G29720 polyamine oxidase 5 polyamine oxidase 5, polyamine
oxidase 5		 0.85 0.31 -0.29
6 AT4G34555 Ribosomal protein S25 family protein 0.84 0.29 -0.32
7 AT4G10450 Ribosomal protein L6 family 0.84 0.32 -0.33
8 AT5G15520 Ribosomal protein S19e family protein 0.83 0.33 -0.33
9 AT2G25210 Ribosomal protein L39 family protein 0.83 0.33 -0.28
10 AT2G19750 Ribosomal protein S30 family protein 0.83 0.32 -0.33
11 AT5G22440 Ribosomal protein L1p/L10e family 0.83 0.33 -0.34
12 AT3G10610 Ribosomal S17 family protein 0.83 0.33 -0.29
13 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.83 0.31 -0.32
14 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6		 0.82 0.31 -0.32
15 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.82 0.31 -0.33
16 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.82 0.32 -0.3
17 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.82 0.33 -0.3
18 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.82 0.3 -0.33
19 AT5G58420 Ribosomal protein S4 (RPS4A) family protein 0.81 0.32 -0.31
20 AT3G17000 ubiquitin-conjugating enzyme 32 ubiquitin-conjugating enzyme 32 -0.81 0.3 -0.29
21 AT3G11250 Ribosomal protein L10 family protein 0.81 0.32 -0.33
22 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.81 0.31 -0.29
23 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 0.81 0.3 -0.33
24 AT2G19740 Ribosomal protein L31e family protein 0.81 0.31 -0.31
25 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.8 0.33 -0.32
26 AT5G02610 Ribosomal L29 family protein 0.8 0.35 -0.31
27 AT2G43460 Ribosomal L38e protein family 0.8 0.31 -0.32
28 AT3G51730 saposin B domain-containing protein -0.79 0.32 -0.32
29 AT4G30800 Nucleic acid-binding, OB-fold-like protein 0.79 0.3 -0.32
30 AT3G54360 zinc ion binding -0.79 0.33 -0.32
31 AT1G12050 fumarylacetoacetase, putative -0.79 0.32 -0.32
32 AT5G26360 TCP-1/cpn60 chaperonin family protein 0.79 0.31 -0.32
33 AT1G08230 Transmembrane amino acid transporter family protein ATGAT1, L-GAMMA-AMINOBUTYRIC ACID
TRANSPORTER 1		 -0.79 0.34 -0.32
34 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 -0.79 0.31 -0.29
35 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.79 0.31 -0.31
36 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.78 0.32 -0.31
37 AT5G23900 Ribosomal protein L13e family protein 0.78 0.32 -0.32
38 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein -0.78 0.32 -0.32
39 AT1G06570 phytoene desaturation 1 4-hydroxyphenylpyruvate
dioxygenase,
4-hydroxyphenylpyruvate
dioxygenase, phytoene desaturation
1		 -0.78 0.3 -0.32
40 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase -0.78 0.32 -0.32
41 AT2G29260 NAD(P)-binding Rossmann-fold superfamily protein 0.78 0.33 -0.34
42 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.78 0.31 -0.33
43 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.78 0.34 -0.31
44 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 -0.78 0.32 -0.31
45 AT2G27775 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
Tetratricopeptide repeat (TPR)-like superfamily protein
(TAIR:AT2G27800.1); Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.31 -0.32
46 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.77 0.3 -0.29
47 AT3G10250 Plant protein 1589 of unknown function -0.77 0.32 -0.32
48 AT4G38010 Pentatricopeptide repeat (PPR-like) superfamily protein 0.77 0.34 -0.32
49 AT5G28060 Ribosomal protein S24e family protein 0.77 0.32 -0.32
50 AT5G10240 asparagine synthetase 3 asparagine synthetase 3 0.77 0.33 -0.32
51 AT1G64190 6-phosphogluconate dehydrogenase family protein 0.77 0.32 -0.29
52 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 0.77 0.3 -0.33
53 AT1G07040 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in
187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi
- 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140
(source: NCBI BLink).		 -0.77 0.29 -0.33
54 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.76 0.32 -0.31
55 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.76 0.33 -0.33
56 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.76 0.31 -0.29
57 AT3G02490 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.3 -0.3
58 AT1G61870 pentatricopeptide repeat 336 pentatricopeptide repeat 336 0.76 0.32 -0.33
59 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.76 0.32 -0.32
60 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 0.76 0.33 -0.31
61 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.76 0.31 -0.32
62 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 0.76 0.32 -0.32
63 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 -0.75 0.32 -0.33
64 AT1G62150 Mitochondrial transcription termination factor family
protein		 0.75 0.29 -0.31
65 AT2G35840 Sucrose-6F-phosphate phosphohydrolase family protein -0.75 0.3 -0.29
66 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.75 0.33 -0.33
67 AT5G23300 pyrimidine d pyrimidine d 0.75 0.31 -0.35
68 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 -0.74 0.33 -0.31
69 AT3G60140 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 30, DARK
INDUCIBLE 2, SENESCENCE-RELATED
GENE 2		 -0.74 0.31 -0.31
70 AT3G51310 VPS35 homolog C VPS35 homolog C -0.74 0.29 -0.32
71 AT5G05230 RING/U-box superfamily protein -0.73 0.33 -0.32
72 AT1G52590 Putative thiol-disulphide oxidoreductase DCC -0.73 0.31 -0.3
73 AT5G38895 RING/U-box superfamily protein -0.73 0.31 -0.34
74 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.73 0.32 -0.34
75 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.73 0.32 -0.34
76 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 -0.73 0.34 -0.29
77 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.72 0.31 -0.32
78 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.72 0.32 -0.31
79 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.72 0.31 -0.31
80 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 -0.72 0.33 -0.31
81 AT1G28260 Telomerase activating protein Est1 -0.72 0.32 -0.33
82 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 -0.71 0.33 -0.31
83 AT5G05570 transducin family protein / WD-40 repeat family protein -0.71 0.31 -0.31
84 AT5G01990 Auxin efflux carrier family protein -0.71 0.31 -0.31
85 AT1G48840 Plant protein of unknown function (DUF639) -0.71 0.31 -0.31
86 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.32 -0.33
87 AT3G02300 Regulator of chromosome condensation (RCC1) family protein -0.7 0.32 -0.31
88 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.7 0.31 -0.32
89 AT1G11910 aspartic proteinase A1 aspartic proteinase A1, ATAPA1 -0.7 0.32 -0.32
90 AT5G66050 Wound-responsive family protein -0.7 0.3 -0.3
91 AT4G02120 CTP synthase family protein -0.69 0.31 -0.33
92 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1		 -0.69 0.3 -0.3
93 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.32 -0.33
94 AT4G29890 choline monooxygenase, putative (CMO-like) -0.69 0.35 -0.32
95 AT1G04830 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.69 0.32 -0.3
96 AT3G07350 Protein of unknown function (DUF506) -0.69 0.31 -0.32
97 AT2G36640 embryonic cell protein 63 embryonic cell protein 63,
embryonic cell protein 63		 -0.69 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0217 Putative glucosinole - - - 0.93 0.48 -0.47