AT1G55915 : -
Query Information
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AGICode AT1G55915
Description zinc ion binding
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G55915 zinc ion binding 1 0.35 -0.33
2 AT3G18290 zinc finger protein-related BRUTUS, embryo defective 2454 -0.74 0.3 -0.34
3 AT3G47640 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 POPEYE -0.7 0.31 -0.34
4 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 -0.69 0.31 -0.33
5 AT2G40300 ferritin 4 ferritin 4, ferritin 4 0.69 0.29 -0.3
6 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.33 -0.29
7 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.3 -0.31
8 AT3G56980 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH039, OBP3-RESPONSIVE GENE 3 -0.67 0.31 -0.31
9 AT2G30540 Thioredoxin superfamily protein -0.66 0.31 -0.31
10 AT3G19400 Cysteine proteinases superfamily protein -0.65 0.3 -0.31
11 AT4G04770 ATP binding cassette protein 1 ATP binding cassette protein 1,
ATP-binding cassette I8, ATP
binding cassette protein 1,
ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMBLY PROTEIN 1, LONG AFTER FR		 0.65 0.32 -0.3
12 AT4G35090 catalase 2 catalase 2 0.64 0.31 -0.35
13 AT3G43670 Copper amine oxidase family protein 0.64 0.29 -0.3
14 AT5G51720 2 iron, 2 sulfur cluster binding 0.63 0.31 -0.32
15 AT3G17770 Dihydroxyacetone kinase -0.63 0.33 -0.32
16 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 -0.62 0.32 -0.3
17 AT5G47880 eukaryotic release factor 1-1 eukaryotic release factor 1-1 0.62 0.32 -0.33
18 AT5G53450 OBP3-responsive gene 1 OBP3-responsive gene 1 -0.62 0.33 -0.31
19 AT3G10960 AZA-guanine resistant1 AZA-guanine resistant1,
AZA-guanine resistant1		 -0.61 0.32 -0.32
20 AT3G22250 UDP-Glycosyltransferase superfamily protein -0.61 0.34 -0.32
21 AT5G01600 ferretin 1 ARABIDOPSIS THALIANA FERRETIN 1,
ferretin 1		 0.61 0.32 -0.3
22 AT5G07740 actin binding 0.61 0.32 -0.31
23 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.6 0.3 -0.32
24 AT5G50200 nitrate transmembrane transporters ATNRT3.1, NITRATE TRANSPORTER 3.1,
WOUND-RESPONSIVE 3		 0.6 0.32 -0.31
25 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.31 -0.31
26 AT2G36885 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to
172 proteins in 58 species: Archae - 0; Bacteria - 116;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 24 (source: NCBI BLink).		 0.59 0.32 -0.31
27 AT1G57870 shaggy-like kinase 42 shaggy-like kinase 42, shaggy-like
kinase 42		 -0.59 0.31 -0.34
28 AT5G23000 myb domain protein 37 ATMYB37, myb domain protein 37,
REGULATOR OF AXILLARY MERISTEMS 1		 0.58 0.31 -0.32
29 AT5G59400 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
PGR5-like B (TAIR:AT4G11960.1); Has 97 Blast hits to 97
proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.33 -0.33
30 AT1G58290 Glutamyl-tRNA reductase family protein Arabidopsis thaliana hemA 1, HEMA1 0.58 0.35 -0.33
31 AT2G05590 TLD-domain containing nucleolar protein -0.58 0.3 -0.3
32 AT4G31270 sequence-specific DNA binding transcription factors -0.57 0.34 -0.34
33 AT2G23890 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase 0.57 0.32 -0.33
34 AT1G34090 transposable element gene 0.56 0.31 -0.31
35 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.56 0.33 -0.33
36 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 -0.56 0.3 -0.31
37 AT3G08000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.56 0.32 -0.3
38 AT4G23280 cysteine-rich RLK (RECEPTOR-like protein kinase) 20 cysteine-rich RLK (RECEPTOR-like
protein kinase) 20		 0.55 0.32 -0.3
39 AT2G20230 Tetraspanin family protein -0.55 0.33 -0.31
40 AT3G27530 golgin candidate 6 golgin candidate 6, MAIGO 4 -0.55 0.33 -0.33
41 AT1G71130 Integrase-type DNA-binding superfamily protein cytokinin response factor 8 -0.55 0.31 -0.32
42 AT4G30520 Leucine-rich repeat protein kinase family protein SENESCENCE-ASSOCIATED
RECEPTOR-LIKE KINASE		 -0.55 0.33 -0.31
43 AT1G48800 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.55 0.3 -0.33
44 AT5G19280 kinase associated protein phosphatase kinase associated protein
phosphatase, ROOT ATTENUATED
GROWTH 1		 0.54 0.32 -0.3
45 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.28 -0.31
46 AT4G25100 Fe superoxide dismutase 1 ARABIDOPSIS FE SUPEROXIDE
DISMUTASE 1, Fe superoxide
dismutase 1		 0.54 0.31 -0.32
47 AT4G36050 endonuclease/exonuclease/phosphatase family protein 0.53 0.3 -0.31
48 AT3G43660 Vacuolar iron transporter (VIT) family protein 0.53 0.34 -0.3
49 AT4G26800 Pentatricopeptide repeat (PPR) superfamily protein 0.53 0.33 -0.31
50 AT1G14570 UBX domain-containing protein -0.52 0.31 -0.32
51 AT3G45430 Concanavalin A-like lectin protein kinase family protein -0.52 0.31 -0.34
52 AT2G31930 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.52 0.32 -0.31
53 AT5G26840 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.51 0.33 -0.31
54 AT2G43550 Scorpion toxin-like knottin superfamily protein -0.51 0.32 -0.31
55 AT4G37820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22795.1); Has 433572 Blast
hits to 177005 proteins in 4263 species: Archae - 2016;
Bacteria - 67591; Metazoa - 157995; Fungi - 49745; Plants -
22011; Viruses - 2192; Other Eukaryotes - 132022 (source:
NCBI BLink).		 -0.51 0.31 -0.32
56 AT5G43410 Integrase-type DNA-binding superfamily protein -0.5 0.33 -0.29
57 AT3G18990 AP2/B3-like transcriptional factor family protein REPRODUCTIVE MERISTEM 39, REDUCED
VERNALIZATION RESPONSE 1		 -0.5 0.33 -0.33
58 AT3G17120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits
to 67 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.49 0.34 -0.34
59 AT3G57320 unknown protein; Has 30 Blast hits to 30 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.49 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
60 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.74 0.48 -0.43
61 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.74 0.42 -0.43 C0091
62 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis -0.73 0.45 -0.42
63 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.71 0.44 -0.45 C0262
64 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.68 0.46 -0.46 C0088
65 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.65 0.46 -0.4 C0027
66 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.64 0.46 -0.45 C0075
67 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.6 0.44 -0.43 C0261
68 C0068 Citric acid - Citrate acetyl-CoA biosynthesis (from citrate),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.59 0.29 -0.32 C0068
69 C0243 Succinic acid - Succinate flavonol biosynthesis,
glyoxylate cycle,
gibberellin biosynthesis III (early C-13 hydroxylation),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
aerobic respiration (alternative oxidase pathway),
gibberellin inactivation I (2beta-hydroxylation),
4-aminobutyrate degradation IV,
luteolin biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
leucodelphinidin biosynthesis,
glutamate degradation IV,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
succinate + a ubiquinone -> a ubiquinol + fumarate,
gibberellin biosynthesis II (early C-3 hydroxylation),
flavonoid biosynthesis,
superpathway of glyoxylate cycle and fatty acid degradation,
aerobic respiration (cytochrome c),
leucopelargonidin and leucocyanidin biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
scopoletin biosynthesis 		-0.54 0.32 -0.32 C0243
70 C0218 Pyridoxamine phosphate Pyridoxamine-5'-phosphate Pyridoxamine-5'-phosphate pyridoxal 5'-phosphate salvage pathway -0.51 0.34 -0.31 C0218
71 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		-0.49 0.3 -0.31 C0259