AT1G53260 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G53260
Description LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 32763 Blast hits to 18534 proteins in 929 species: Archae - 22; Bacteria - 2420; Metazoa - 15140; Fungi - 5401; Plants - 5313; Viruses - 485; Other Eukaryotes - 3982 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G53260 LOCATED IN: endomembrane system; BEST Arabidopsis thaliana
protein match is: cobalt ion binding (TAIR:AT3G15000.1);
Has 32763 Blast hits to 18534 proteins in 929 species:
Archae - 22; Bacteria - 2420; Metazoa - 15140; Fungi -
5401; Plants - 5313; Viruses - 485; Other Eukaryotes - 3982
(source: NCBI BLink).		 1 0.32 -0.32
2 AT4G26880 Stigma-specific Stig1 family protein 0.7 0.32 -0.31
3 AT5G64590 BEST Arabidopsis thaliana protein match is: Putative
endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.32 -0.3
4 AT4G08490 transposable element gene -0.67 0.3 -0.33
5 AT1G75140 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.62 0.31 -0.31
6 AT2G04300 Leucine-rich repeat protein kinase family protein 0.61 0.31 -0.29
7 AT5G28240 transposable element gene 0.61 0.32 -0.31
8 AT1G44740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower,
seed; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 8 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.3 -0.31
9 AT3G54590 hydroxyproline-rich glycoprotein hydroxyproline-rich glycoprotein,
hydroxyproline-rich glycoprotein		 0.6 0.34 -0.31
10 AT5G06640 Proline-rich extensin-like family protein extensin 10 0.6 0.3 -0.32
11 AT5G24880 BEST Arabidopsis thaliana protein match is:
calmodulin-binding protein-related (TAIR:AT5G10660.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.3 -0.31
12 AT5G55900 Sucrase/ferredoxin-like family protein -0.59 0.32 -0.33
13 AT1G22810 Integrase-type DNA-binding superfamily protein -0.59 0.31 -0.33
14 AT5G19800 hydroxyproline-rich glycoprotein family protein 0.59 0.3 -0.3
15 AT4G08410 Proline-rich extensin-like family protein 0.59 0.31 -0.31
16 AT5G55080 ras-related nuclear protein 4 ras-related nuclear protein 4,
ras-related nuclear protein 4		 0.57 0.31 -0.32
17 AT2G31770 RING/U-box superfamily protein ARIADNE 9, ARABIDOPSIS ARIADNE 9 -0.57 0.32 -0.32
18 AT5G05150 autophagy-related gene 18E ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18E,
autophagy-related gene 18E,
autophagy-related gene 18E		 0.57 0.31 -0.33
19 AT1G17310 MADS-box transcription factor family protein 0.56 0.3 -0.29
20 AT3G02670 Glycine-rich protein family 0.56 0.32 -0.29
21 AT3G21860 SKP1-like 10 SKP1-like 10, SKP1-like 10 0.56 0.33 -0.29
22 AT2G22050 Galactose oxidase/kelch repeat superfamily protein 0.56 0.31 -0.33
23 AT4G07530 transposable element gene 0.55 0.32 -0.3
24 AT1G66400 calmodulin like 23 calmodulin like 23 -0.55 0.31 -0.31
25 AT2G14210 AGAMOUS-like 44 AGAMOUS-like 44, ARABIDOPSIS
NITRATE REGULATED 1		 0.55 0.28 -0.3
26 AT5G43230 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.55 0.33 -0.33
27 AT4G31250 Leucine-rich repeat protein kinase family protein 0.55 0.32 -0.31
28 AT4G15370 baruol synthase 1 baruol synthase 1, PENTACYCLIC
TRITERPENE SYNTHASE 2		 0.55 0.33 -0.31
29 AT2G14030 transposable element gene 0.55 0.3 -0.31
30 AT3G32280 ATP-dependent helicase family protein 0.54 0.31 -0.33
31 AT5G67090 Subtilisin-like serine endopeptidase family protein -0.54 0.31 -0.33
32 AT4G13800 Protein of unknown function (DUF803) 0.54 0.32 -0.33
33 AT5G13990 exocyst subunit exo70 family protein C2 exocyst subunit exo70 family
protein C2, exocyst subunit exo70
family protein C2		 0.54 0.3 -0.31
34 AT1G53340 Cysteine/Histidine-rich C1 domain family protein 0.54 0.33 -0.31
35 AT1G56410 heat shock protein 70 (Hsp 70) family protein EARLY-RESPONSIVE TO DEHYDRATION 2,
HEAT SHOCK PROTEIN 70T-1		 -0.53 0.3 -0.32
36 AT3G01780 ARM repeat superfamily protein TPLATE 0.53 0.32 -0.32
37 AT2G11190 transposable element gene 0.52 0.33 -0.31
38 AT1G78360 glutathione S-transferase TAU 21 glutathione S-transferase TAU 21,
glutathione S-transferase TAU 21		 -0.52 0.33 -0.3
39 AT3G06160 AP2/B3-like transcriptional factor family protein -0.52 0.31 -0.3
40 AT1G32570 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.31
41 AT1G03990 Long-chain fatty alcohol dehydrogenase family protein -0.52 0.32 -0.3
42 AT1G80620 S15/NS1, RNA-binding protein -0.52 0.3 -0.33
43 AT2G20500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 13 Blast hits to 13 proteins
in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.51 0.31 -0.34
44 AT1G18950 DDT domain superfamily 0.51 0.32 -0.31
45 AT1G11920 Pectin lyase-like superfamily protein 0.51 0.32 -0.32
46 AT1G42610 transposable element gene 0.5 0.32 -0.29
47 AT1G35530 DEAD/DEAH box RNA helicase family protein 0.5 0.32 -0.3
48 AT3G54870 Armadillo/beta-catenin repeat family protein / kinesin
motor family protein		 ARMADILLO REPEAT-CONTAINING
KINESIN 1, Arabidopsis thaliana
KINESIN Ungrouped clade, gene A,
CA-ROP2 ENHANCER 1, MORPHOGENESIS
OF ROOT HAIR 2		 0.5 0.32 -0.32
49 AT5G25060 RNA recognition motif (RRM)-containing protein 0.5 0.31 -0.32
50 AT2G01960 tetraspanin14 tetraspanin14 -0.49 0.32 -0.34
51 AT1G17390 transposable element gene -0.48 0.31 -0.32
52 AT1G70840 MLP-like protein 31 MLP-like protein 31 -0.48 0.3 -0.31
53 AT2G14730 transposable element gene -0.46 0.33 -0.32
54 AT3G19690 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.45 0.3 -0.32
55 AT5G08250 Cytochrome P450 superfamily protein -0.44 0.35 -0.31
56 AT2G13950 Cysteine/Histidine-rich C1 domain family protein -0.44 0.32 -0.34
57 AT5G52000 importin alpha isoform 8 importin alpha isoform 8 -0.44 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
58 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.69 0.51 -0.49 C0251
59 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.55 0.36 -0.34