AT1G19360 : reduced residual arabinose 3
Query Information
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AGICode AT1G19360
Description Nucleotide-diphospho-sugar transferase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G19360 Nucleotide-diphospho-sugar transferase family protein reduced residual arabinose 3 1 0.31 -0.33
2 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.82 0.31 -0.31
3 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR 0.77 0.33 -0.29
4 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 0.77 0.33 -0.32
5 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 0.76 0.3 -0.32
6 AT5G13420 Aldolase-type TIM barrel family protein 0.76 0.32 -0.3
7 AT3G12030 Protein of unknown function DUF106, transmembrane 0.76 0.32 -0.31
8 AT5G20400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.76 0.32 -0.31
9 AT3G03600 ribosomal protein S2 ribosomal protein S2 0.76 0.33 -0.3
10 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.75 0.3 -0.32
11 AT2G40330 PYR1-like 6 PYR1-like 6, regulatory components
of ABA receptor 9		 0.75 0.3 -0.34
12 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 0.75 0.31 -0.3
13 AT2G18440 GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15); other RNA GENE WITH UNSTABLE TRANSCRIPT 15 -0.74 0.3 -0.32
14 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.74 0.3 -0.32
15 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.74 0.3 -0.32
16 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.74 0.3 -0.29
17 AT3G09490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.31 -0.34
18 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.31 -0.32
19 AT4G19410 Pectinacetylesterase family protein 0.74 0.3 -0.32
20 AT5G20840 Phosphoinositide phosphatase family protein -0.73 0.33 -0.31
21 AT5G62090 SEUSS-like 2 SEUSS-like 2 -0.73 0.32 -0.3
22 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.72 0.29 -0.31
23 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.32 -0.31
24 AT4G22720 Actin-like ATPase superfamily protein 0.72 0.31 -0.3
25 AT1G14210 Ribonuclease T2 family protein 0.72 0.3 -0.31
26 AT3G12370 Ribosomal protein L10 family protein 0.72 0.31 -0.31
27 AT2G17630 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.72 0.32 -0.31
28 AT1G52070 Mannose-binding lectin superfamily protein 0.71 0.3 -0.32
29 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.71 0.31 -0.31
30 AT3G45900 Ribonuclease P protein subunit P38-related -0.71 0.32 -0.33
31 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.71 0.29 -0.31
32 AT3G22380 time for coffee TIME FOR COFFEE -0.71 0.32 -0.32
33 AT5G45510 Leucine-rich repeat (LRR) family protein 0.71 0.29 -0.32
34 AT1G13950 eukaryotic elongation factor 5A-1 EUKARYOTIC ELONGATION FACTOR 5A-1,
EIF-5A, EUKARYOTIC ELONGATION
FACTOR 5A, eukaryotic elongation
factor 5A-1		 0.71 0.31 -0.33
35 AT1G52200 PLAC8 family protein 0.71 0.34 -0.31
36 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.7 0.32 -0.3
37 AT5G43910 pfkB-like carbohydrate kinase family protein 0.7 0.33 -0.31
38 AT4G22930 pyrimidin 4 DIHYDROOROTASE, pyrimidin 4 0.7 0.33 -0.3
39 AT1G20770 unknown protein; Has 59 Blast hits to 59 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.3 -0.31
40 AT2G21160 Translocon-associated protein (TRAP), alpha subunit 0.7 0.3 -0.32
41 AT2G36390 starch branching enzyme 2.1 BRANCHING ENZYME 3, starch
branching enzyme 2.1		 -0.7 0.32 -0.32
42 AT2G34050 INVOLVED IN: protein complex assembly; LOCATED IN:
mitochondrion, chloroplast; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 9 growth stages; CONTAINS
InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304
Blast hits to 304 proteins in 167 species: Archae - 0;
Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 0.7 0.3 -0.32
43 AT5G63400 adenylate kinase 1 adenylate kinase 1 0.7 0.29 -0.31
44 AT3G52930 Aldolase superfamily protein 0.69 0.34 -0.31
45 AT5G64120 Peroxidase superfamily protein 0.69 0.31 -0.33
46 AT1G77800 PHD finger family protein -0.69 0.32 -0.34
47 AT3G53110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 4		 0.69 0.3 -0.32
48 AT5G66680 dolichyl-diphosphooligosaccharide-protein
glycosyltransferase 48kDa subunit family protein		 DEFECTIVE GLYCOSYLATION 0.69 0.32 -0.31
49 AT2G26240 Transmembrane proteins 14C 0.69 0.33 -0.3
50 AT1G71940 SNARE associated Golgi protein family 0.69 0.32 -0.31
51 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.68 0.32 -0.32
52 AT3G01720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in
23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 316; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.68 0.33 -0.32
53 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.35
54 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.68 0.32 -0.31
55 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3		 0.68 0.32 -0.35
56 AT1G74030 enolase 1 enolase 1 0.68 0.31 -0.34
57 AT5G44450 methyltransferases 0.68 0.31 -0.32
58 AT1G12000 Phosphofructokinase family protein 0.68 0.31 -0.31
59 AT5G04310 Pectin lyase-like superfamily protein 0.67 0.29 -0.31
60 AT3G59920 RAB GDP dissociation inhibitor 2 RAB GDP dissociation inhibitor 2,
RAB GDP dissociation inhibitor 2		 0.67 0.33 -0.32
61 AT3G43220 Phosphoinositide phosphatase family protein -0.67 0.32 -0.31
62 AT3G01290 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 AtHIR2, hypersensitive induced
reaction 2		 0.67 0.31 -0.31
63 AT5G20680 TRICHOME BIREFRINGENCE-LIKE 16 TRICHOME BIREFRINGENCE-LIKE 16 0.67 0.31 -0.32
64 AT5G53540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.33 -0.33
65 AT4G33360 NAD(P)-binding Rossmann-fold superfamily protein farnesol dehydrogenase 0.67 0.31 -0.3
66 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 -0.67 0.3 -0.32
67 AT3G50380 Protein of unknown function (DUF1162) -0.66 0.34 -0.3
68 AT3G57570 ARM repeat superfamily protein -0.66 0.32 -0.32
69 AT4G27270 Quinone reductase family protein 0.66 0.31 -0.31
70 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.66 0.31 -0.31
71 AT4G32390 Nucleotide-sugar transporter family protein 0.66 0.32 -0.31
72 ATCG01100 NADH dehydrogenase family protein NDHA -0.65 0.31 -0.32
73 AT3G05030 sodium hydrogen exchanger 2 ATNHX2, sodium hydrogen exchanger
2		 -0.65 0.33 -0.31
74 AT5G54970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.65 0.32 -0.29
75 AT3G51950 Zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.65 0.34 -0.34
76 AT2G28490 RmlC-like cupins superfamily protein -0.65 0.31 -0.31
77 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.65 0.32 -0.31
78 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.65 0.32 -0.32
79 AT1G67330 Protein of unknown function (DUF579) 0.65 0.32 -0.32
80 AT3G30300 O-fucosyltransferase family protein -0.64 0.32 -0.32
81 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.64 0.32 -0.3
82 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 -0.64 0.3 -0.31
83 AT4G09150 T-complex protein 11 -0.64 0.33 -0.3
84 AT4G33210 F-box family protein SLOW MOTION -0.64 0.32 -0.31
85 AT4G18130 phytochrome E phytochrome E -0.64 0.33 -0.3
86 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 -0.64 0.32 -0.29
87 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.64 0.28 -0.31
88 AT2G15810 transposable element gene -0.63 0.3 -0.3
89 ATCG00530 CemA-like proton extrusion protein-related YCF10 -0.63 0.3 -0.3
90 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 -0.63 0.35 -0.31
91 AT1G80800 pseudogene, 40S ribosomal protein S12 (RPS12B), similar to
ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum
vulgare); blastp match of 65% identity and 4.7e-12 P-value
to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S
ribosomal protein S12 {Oryza sativa (japonica
cultivar-group)}		 -0.63 0.32 -0.33
92 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.63 0.3 -0.33
93 AT4G03205 Coproporphyrinogen III oxidase hemf2 -0.63 0.32 -0.33
94 AT1G66140 zinc finger protein 4 zinc finger protein 4 -0.63 0.3 -0.33
95 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 -0.62 0.3 -0.33
96 ATCG00750 ribosomal protein S11 ribosomal protein S11 -0.62 0.34 -0.33
97 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.62 0.3 -0.31
98 AT5G58720 smr (Small MutS Related) domain-containing protein -0.62 0.29 -0.31
99 AT1G67530 ARM repeat superfamily protein -0.61 0.3 -0.32
100 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SILENCING DEFECTIVE -0.61 0.32 -0.32
101 ATCG00760 ribosomal protein L36 ribosomal protein L36 -0.61 0.31 -0.31
102 AT1G16820 vacuolar ATP synthase catalytic subunit-related /
V-ATPase-related / vacuolar proton pump-related		 -0.6 0.31 -0.3
103 AT2G25170 chromatin remodeling factor CHD3 (PICKLE) CHD3, CHR6,
CYTOKININ-HYPERSENSITIVE 2,
GYMNOS, PICKLE, SUPPRESSOR OF SLR
2		 -0.6 0.32 -0.3
104 AT1G55510 branched-chain alpha-keto acid decarboxylase E1 beta
subunit		 branched-chain alpha-keto acid
decarboxylase E1 beta subunit		 -0.6 0.34 -0.31
105 AT5G02030 POX (plant homeobox) family protein BEL1-LIKE HOMEODOMAIN 9,
BELLRINGER, HB-6, LARSON,
PENNYWISE, REPLUMLESS, VAAMANA		 -0.6 0.32 -0.29
106 AT5G02670 BEST Arabidopsis thaliana protein match is: poly(A)
polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.31 -0.32
107 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B -0.6 0.31 -0.31
108 AT1G15340 methyl-CPG-binding domain 10 methyl-CPG-binding domain 10 -0.6 0.33 -0.31
109 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE -0.6 0.3 -0.29
110 AT3G57470 Insulinase (Peptidase family M16) family protein -0.59 0.31 -0.3
111 AT2G03150 ATP/GTP-binding protein family embryo defective 1579 -0.59 0.31 -0.31
112 AT5G22760 PHD finger family protein -0.59 0.32 -0.32
113 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB -0.59 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.82 0.45 -0.45 C0123
115 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis -0.79 0.45 -0.43 C0003
116 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.71 0.43 -0.46 C0210