AT1G32490 : EMBRYO DEFECTIVE 2733
Query Information
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AGICode AT1G32490
Description RNA helicase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 1 0.31 -0.33
2 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 0.77 0.31 -0.32
3 AT4G02480 AAA-type ATPase family protein 0.76 0.32 -0.34
4 AT3G07100 Sec23/Sec24 protein transport family protein AtSEC24A, ENDOPLASMIC RETICULUM
MORPHOLOGY 2, SEC24A		 0.75 0.3 -0.33
5 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.75 0.31 -0.32
6 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 0.74 0.3 -0.31
7 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.32 -0.32
8 AT1G50030 target of rapamycin target of rapamycin 0.73 0.32 -0.32
9 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B 0.72 0.31 -0.31
10 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 0.72 0.32 -0.33
11 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.7 0.3 -0.32
12 AT5G65620 Zincin-like metalloproteases family protein 0.7 0.33 -0.33
13 AT1G02890 AAA-type ATPase family protein 0.7 0.32 -0.31
14 AT1G08620 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 PKDM7D 0.7 0.31 -0.32
15 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 0.69 0.32 -0.3
16 AT3G27400 Pectin lyase-like superfamily protein -0.69 0.33 -0.33
17 AT4G05420 damaged DNA binding protein 1A damaged DNA binding protein 1A 0.69 0.33 -0.3
18 AT5G15240 Transmembrane amino acid transporter family protein 0.69 0.31 -0.32
19 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 -0.69 0.32 -0.3
20 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.69 0.31 -0.3
21 AT5G56290 peroxin 5 ARABIDOPSIS PEROXIN 5, EMBRYO
DEFECTIVE 2790, peroxin 5		 0.68 0.33 -0.32
22 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 0.68 0.32 -0.3
23 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 -0.68 0.32 -0.32
24 AT1G07880 Protein kinase superfamily protein ATMPK13 -0.68 0.3 -0.3
25 AT2G07360 SH3 domain-containing protein 0.68 0.31 -0.32
26 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.67 0.31 -0.33
27 AT3G15980 Coatomer, beta' subunit 0.67 0.31 -0.33
28 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 0.67 0.32 -0.33
29 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.67 0.31 -0.32
30 AT1G03280 Transcription factor TFIIE, alpha subunit 0.67 0.32 -0.3
31 AT1G77890 DNA-directed RNA polymerase II protein 0.67 0.32 -0.31
32 AT3G46540 ENTH/VHS family protein -0.67 0.31 -0.3
33 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 0.67 0.32 -0.33
34 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.66 0.33 -0.33
35 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.66 0.34 -0.3
36 AT5G61140 U5 small nuclear ribonucleoprotein helicase 0.66 0.32 -0.32
37 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.66 0.32 -0.3
38 AT1G10390 Nucleoporin autopeptidase 0.66 0.34 -0.31
39 AT4G23730 Galactose mutarotase-like superfamily protein -0.66 0.3 -0.3
40 AT5G41100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in
220 species: Archae - 4; Bacteria - 108; Metazoa - 481;
Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes -
367 (source: NCBI BLink).		 0.66 0.32 -0.32
41 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.66 0.3 -0.33
42 AT4G34500 Protein kinase superfamily protein -0.65 0.31 -0.31
43 AT2G41180 VQ motif-containing protein sigma factor binding protein 2 -0.65 0.32 -0.33
44 AT4G00360 cytochrome P450, family 86, subfamily A, polypeptide 2 ABERRANT INDUCTION OF TYPE THREE
1, cytochrome P450, family 86,
subfamily A, polypeptide 2		 -0.65 0.33 -0.31
45 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.65 0.31 -0.3
46 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.65 0.32 -0.3
47 AT5G55040 DNA-binding bromodomain-containing protein 0.65 0.31 -0.31
48 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.65 0.3 -0.32
49 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.32 -0.32
50 AT4G36650 plant-specific TFIIB-related protein plant-specific TFIIB-related
protein, plant-specific
TFIIB-related protein		 0.65 0.31 -0.31
51 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 0.64 0.33 -0.3
52 AT4G31590 Cellulose-synthase-like C5 CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5,
CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5		 0.64 0.34 -0.31
53 AT1G63980 D111/G-patch domain-containing protein 0.64 0.31 -0.29
54 AT2G16485 nucleic acid binding;zinc ion binding;DNA binding 0.64 0.31 -0.3
55 AT4G32640 Sec23/Sec24 protein transport family protein 0.64 0.3 -0.33
56 AT4G36140 disease resistance protein (TIR-NBS-LRR class), putative 0.64 0.32 -0.32
57 AT2G03140 alpha/beta-Hydrolases superfamily protein 0.63 0.31 -0.31
58 AT3G52640 Zn-dependent exopeptidases superfamily protein 0.63 0.33 -0.32
59 AT3G11960 Cleavage and polyadenylation specificity factor (CPSF) A
subunit protein		 0.63 0.31 -0.32
60 AT1G26110 decapping 5 decapping 5 0.63 0.31 -0.32
61 AT1G13470 Protein of unknown function (DUF1262) -0.63 0.32 -0.31
62 AT5G11040 TRS120 AtTRS120, TRS120 0.63 0.33 -0.33
63 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 0.63 0.32 -0.3
64 AT3G63070 Tudor/PWWP/MBT domain-containing protein 0.62 0.33 -0.3
65 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.62 0.32 -0.32
66 AT3G01310 Phosphoglycerate mutase-like family protein 0.62 0.32 -0.32
67 AT1G71530 Protein kinase superfamily protein 0.62 0.32 -0.31
68 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.62 0.32 -0.32
69 AT4G39320 microtubule-associated protein-related -0.61 0.3 -0.31
70 AT2G40770 zinc ion binding;DNA binding;helicases;ATP binding;nucleic
acid binding		 0.61 0.32 -0.31
71 AT5G47130 Bax inhibitor-1 family protein -0.61 0.31 -0.32
72 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.61 0.32 -0.31
73 AT5G57130 Clp amino terminal domain-containing protein 0.61 0.31 -0.32
74 AT1G63770 Peptidase M1 family protein 0.61 0.31 -0.31
75 AT2G04830 Protein of unknown function (DUF295) 0.61 0.29 -0.31
76 AT1G35740 pseudogene, similar to putative beta-1,3-glucan synthase,
blastp match of 57% identity and 2.1e-14 P-value to
GP|23503034|gb|AAK49452.2|AF304372_1|AF304372 putative
beta-1,3-glucan synthase {Nicotiana alata}		 -0.61 0.3 -0.31
77 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 0.61 0.31 -0.31
78 AT5G24320 Transducin/WD40 repeat-like superfamily protein 0.61 0.32 -0.31
79 AT5G38560 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 8, proline-rich
extensin-like receptor kinase 8		 0.61 0.32 -0.31
80 AT5G06610 Protein of unknown function (DUF620) -0.6 0.32 -0.33
81 AT3G04980 DNAJ heat shock N-terminal domain-containing protein -0.6 0.31 -0.32
82 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.6 0.31 -0.3
83 AT2G07505 zinc ion binding -0.59 0.3 -0.31
84 AT5G59410 Rab5-interacting family protein -0.58 0.3 -0.3
85 AT1G69630 F-box/RNI-like superfamily protein -0.58 0.34 -0.3
86 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.58 0.31 -0.31
87 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 -0.58 0.32 -0.31
88 AT1G21130 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 4		 -0.58 0.32 -0.31
89 AT2G24390 AIG2-like (avirulence induced gene) family protein -0.57 0.33 -0.3
90 AT4G36220 ferulic acid 5-hydroxylase 1 CYP84A1, ferulic acid
5-hydroxylase 1		 -0.56 0.3 -0.31
91 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family -0.56 0.31 -0.32
92 AT5G06190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.32 -0.31
93 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 -0.56 0.32 -0.32
94 AT4G14570 acylaminoacyl-peptidase-related acylamino acid-releasing enzyme,
AtAARE		 -0.55 0.34 -0.29
95 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.55 0.32 -0.3
96 AT5G48570 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 ATFKBP65, FKBP65, ROF2 -0.55 0.31 -0.3
97 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 -0.55 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0074 Cystine L-Cystine L-Cystine protein precursor 0.79 0.46 -0.43 C0074
99 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.71 0.42 -0.45 C0144