AT1G06190 : -
Query Information
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AGICode AT1G06190
Description Rho termination factor
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G06190 Rho termination factor 1 0.34 -0.32
2 AT2G39670 Radical SAM superfamily protein 0.95 0.32 -0.32
3 AT1G56050 GTP-binding protein-related 0.94 0.3 -0.32
4 AT3G12930 Lojap-related protein 0.94 0.36 -0.32
5 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.94 0.32 -0.3
6 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein 0.94 0.29 -0.31
7 AT1G11430 plastid developmental protein DAG, putative 0.93 0.33 -0.32
8 AT4G37510 Ribonuclease III family protein 0.93 0.32 -0.33
9 AT2G43030 Ribosomal protein L3 family protein 0.93 0.35 -0.31
10 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.93 0.32 -0.3
11 AT3G08740 elongation factor P (EF-P) family protein 0.92 0.31 -0.33
12 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.92 0.33 -0.29
13 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.92 0.32 -0.32
14 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.92 0.3 -0.3
15 AT4G26370 antitermination NusB domain-containing protein 0.92 0.31 -0.33
16 AT5G48630 Cyclin family protein 0.92 0.34 -0.35
17 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.92 0.3 -0.33
18 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.92 0.29 -0.31
19 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.92 0.31 -0.34
20 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.91 0.32 -0.29
21 AT5G59500 protein C-terminal S-isoprenylcysteine carboxyl
O-methyltransferases		 0.91 0.31 -0.31
22 AT5G65220 Ribosomal L29 family protein 0.91 0.31 -0.32
23 AT2G33450 Ribosomal L28 family 0.91 0.3 -0.31
24 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.91 0.32 -0.33
25 AT4G28660 photosystem II reaction center PSB28 protein photosystem II reaction center
PSB28 protein		 0.91 0.32 -0.33
26 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.91 0.32 -0.33
27 AT2G31170 Cysteinyl-tRNA synthetase, class Ia family protein FIONA, cysteinyl t-RNA synthetase 0.91 0.32 -0.31
28 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.91 0.32 -0.32
29 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.91 0.31 -0.3
30 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.91 0.31 -0.32
31 AT4G34290 SWIB/MDM2 domain superfamily protein 0.9 0.3 -0.33
32 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.9 0.35 -0.3
33 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.9 0.32 -0.31
34 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.9 0.29 -0.31
35 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 0.9 0.35 -0.31
36 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.9 0.31 -0.3
37 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.32 -0.29
38 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.9 0.32 -0.3
39 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.9 0.31 -0.35
40 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.9 0.34 -0.33
41 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.9 0.3 -0.32
42 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.9 0.32 -0.33
43 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.9 0.33 -0.31
44 AT5G54600 Translation protein SH3-like family protein 0.9 0.31 -0.3
45 AT3G54210 Ribosomal protein L17 family protein 0.89 0.31 -0.29
46 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.89 0.3 -0.31
47 AT5G47190 Ribosomal protein L19 family protein 0.89 0.33 -0.33
48 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.3 -0.32
49 AT5G20720 chaperonin 20 ATCPN21, CHLOROPLAST CHAPERONIN
10, CHLOROPLAST CHAPERONIN 10,
chaperonin 20, CPN21		 0.89 0.31 -0.31
50 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.89 0.31 -0.29
51 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.89 0.32 -0.31
52 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.89 0.32 -0.33
53 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.89 0.32 -0.3
54 AT4G17560 Ribosomal protein L19 family protein 0.89 0.31 -0.35
55 AT3G07430 YGGT family protein ATYLMG1-1, embryo defective 1990,
YLMG1-1		 0.89 0.3 -0.34
56 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.89 0.32 -0.34
57 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.89 0.31 -0.3
58 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.89 0.3 -0.32
59 AT1G60230 Radical SAM superfamily protein 0.89 0.32 -0.31
60 AT5G55220 trigger factor type chaperone family protein 0.89 0.32 -0.34
61 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.89 0.33 -0.32
62 AT5G17710 Co-chaperone GrpE family protein embryo defective 1241 0.89 0.32 -0.31
63 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.89 0.31 -0.31
64 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.89 0.3 -0.31
65 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.89 0.31 -0.35
66 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.88 0.35 -0.32
67 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.88 0.32 -0.31
68 AT3G57560 N-acetyl-l-glutamate kinase N-acetyl-l-glutamate kinase 0.88 0.3 -0.33
69 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.88 0.31 -0.3
70 AT1G33810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.88 0.31 -0.31
71 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.88 0.33 -0.31
72 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C 0.88 0.32 -0.32
73 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.88 0.33 -0.31
74 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.88 0.3 -0.32
75 AT5G24020 septum site-determining protein (MIND) ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 11, ATMIND1, MIND		 0.88 0.33 -0.32
76 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.88 0.31 -0.3
77 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.88 0.34 -0.32
78 AT2G43630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67
Blast hits to 67 proteins in 20 species: Archae - 0;
Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses
- 2; Other Eukaryotes - 2 (source: NCBI BLink).		 0.88 0.31 -0.31
79 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.88 0.29 -0.31
80 AT2G23670 homolog of Synechocystis YCF37 homolog of Synechocystis YCF37 0.88 0.3 -0.33
81 AT1G16790 ribosomal protein-related 0.88 0.32 -0.34
82 AT2G14880 SWIB/MDM2 domain superfamily protein 0.88 0.33 -0.31
83 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.88 0.33 -0.32
84 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.88 0.31 -0.32
85 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.33 -0.29
86 AT1G14410 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 1, PTAC1,
WHIRLY 1		 0.88 0.31 -0.33
87 AT1G08640 Chloroplast J-like domain 1 Chloroplast J-like domain 1 0.88 0.29 -0.31
88 AT4G34730 ribosome-binding factor A family protein 0.87 0.28 -0.32
89 AT4G36390 Methylthiotransferase 0.87 0.31 -0.29
90 AT3G58610 ketol-acid reductoisomerase 0.87 0.33 -0.31
91 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 0.87 0.3 -0.3
92 AT1G36390 Co-chaperone GrpE family protein 0.87 0.3 -0.32
93 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.87 0.32 -0.31
94 AT4G28210 embryo defective 1923 embryo defective 1923 0.87 0.31 -0.34
95 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.87 0.31 -0.29
96 AT2G43710 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 FATTY ACID BIOSYNTHESIS 2,
suppressor of SA insensitive 2		 0.87 0.31 -0.32
97 AT5G63050 embryo defective 2759 embryo defective 2759 0.87 0.32 -0.31
98 AT2G24090 Ribosomal protein L35 0.87 0.3 -0.31
99 AT2G21860 violaxanthin de-epoxidase-related 0.87 0.31 -0.31
100 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.87 0.33 -0.32
101 AT3G13740 Ribonuclease III family protein 0.87 0.3 -0.33
102 AT2G38800 Plant calmodulin-binding protein-related -0.82 0.32 -0.32
103 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.77 0.32 -0.28
104 AT5G18780 F-box/RNI-like superfamily protein -0.77 0.3 -0.33
105 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.75 0.32 -0.3
106 AT5G49880 mitotic checkpoint family protein -0.72 0.29 -0.31
107 AT5G37540 Eukaryotic aspartyl protease family protein -0.72 0.3 -0.31
108 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.71 0.32 -0.32
109 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.71 0.31 -0.32
110 AT2G40110 Yippee family putative zinc-binding protein -0.7 0.31 -0.31
111 AT5G60890 myb domain protein 34 ATMYB34, ALTERED TRYPTOPHAN
REGULATION 1, myb domain protein
34		 -0.7 0.32 -0.29
112 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.69 0.3 -0.31
113 AT1G24440 RING/U-box superfamily protein -0.69 0.32 -0.3
114 AT3G49810 ARM repeat superfamily protein -0.68 0.29 -0.31
115 AT4G23980 auxin response factor 9 auxin response factor 9 -0.67 0.31 -0.31
116 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.66 0.31 -0.33
117 AT1G05577 Domain of unknown function (DUF966) -0.66 0.33 -0.3