AT1G43710 : embryo defective 1075
Query Information
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AGICode AT1G43710
Description Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G43710 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 embryo defective 1075 1 0.33 -0.33
2 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.83 0.33 -0.32
3 AT4G14960 Tubulin/FtsZ family protein TUA6 0.83 0.3 -0.33
4 AT3G43810 calmodulin 7 calmodulin 7 0.83 0.31 -0.33
5 AT5G15350 early nodulin-like protein 17 AtENODL17, early nodulin-like
protein 17		 0.83 0.31 -0.31
6 AT3G09200 Ribosomal protein L10 family protein 0.83 0.31 -0.32
7 AT5G04430 binding to TOMV RNA 1L (long form) BINDING TO TOMV RNA 1, binding to
TOMV RNA 1L (long form), BINDING
TO TOMV RNA 1S (SHORT FORM)		 0.82 0.29 -0.33
8 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.82 0.3 -0.33
9 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.82 0.33 -0.31
10 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 0.82 0.31 -0.31
11 AT3G48750 cell division control 2 cell division control 2, CDC2A,
CDC2AAT, CDK2, CDKA1, CDKA;1		 0.81 0.3 -0.31
12 AT1G05850 Chitinase family protein ATCTL1, CHITINASE-LIKE PROTEIN 1,
ECTOPIC DEPOSITION OF LIGNIN IN
PITH, ECTOPIC DEPOSITION OF LIGNIN
IN PITH 1, ECTOPIC ROOT HAIR 2,
SENSITIVE TO HOT TEMPERATURES 2,
POM-POM1		 0.81 0.34 -0.32
13 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein		 EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12		 0.81 0.3 -0.33
14 AT3G49910 Translation protein SH3-like family protein 0.81 0.29 -0.3
15 AT3G18780 actin 2 actin 2, DEFORMED ROOT HAIRS 1,
ENHANCER OF LRX1 2, FRIZZY AND
KINKED SHOOTS 2, LIGHT
STRESS-REGULATED 2		 0.81 0.31 -0.33
16 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.81 0.32 -0.32
17 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.81 0.3 -0.32
18 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 0.81 0.29 -0.32
19 AT1G23030 ARM repeat superfamily protein 0.81 0.31 -0.32
20 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.81 0.3 -0.28
21 AT5G44130 FASCICLIN-like arabinogalactan protein 13 precursor FASCICLIN-like arabinogalactan
protein 13 precursor		 0.8 0.33 -0.32
22 AT1G27310 nuclear transport factor 2A nuclear transport factor 2A 0.8 0.33 -0.29
23 AT1G05810 RAB GTPase homolog A5E ARA, ARA-1, ATRAB11D, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A5E,
RAB GTPase homolog A5E		 0.8 0.31 -0.32
24 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.8 0.32 -0.32
25 AT2G38800 Plant calmodulin-binding protein-related -0.8 0.32 -0.31
26 AT1G12310 Calcium-binding EF-hand family protein 0.79 0.31 -0.31
27 AT2G47580 spliceosomal protein U1A spliceosomal protein U1A 0.79 0.3 -0.31
28 AT5G61840 Exostosin family protein GUT1 0.79 0.32 -0.3
29 AT5G56280 COP9 signalosome subunit 6A COP9 signalosome subunit 6A 0.79 0.32 -0.32
30 AT1G12500 Nucleotide-sugar transporter family protein 0.79 0.3 -0.31
31 AT4G32330 TPX2 (targeting protein for Xklp2) protein family 0.78 0.31 -0.31
32 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 0.78 0.32 -0.32
33 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.77 0.3 -0.31
34 AT4G09800 S18 ribosomal protein S18 ribosomal protein 0.77 0.3 -0.3
35 AT4G02360 Protein of unknown function, DUF538 -0.77 0.31 -0.31
36 AT2G43100 isopropylmalate isomerase 2 ATLEUD1, isopropylmalate isomerase
2		 0.77 0.3 -0.32
37 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.77 0.33 -0.32
38 AT5G65430 general regulatory factor 8 14-3-3 PROTEIN G-BOX FACTOR14
KAPPA, GF14 KAPPA, general
regulatory factor 8		 0.77 0.3 -0.33
39 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.77 0.31 -0.31
40 AT3G11420 Protein of unknown function (DUF604) -0.77 0.31 -0.3
41 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 0.76 0.32 -0.31
42 AT1G11680 CYTOCHROME P450 51G1 CYTOCHROME P450 51, CYTOCHROME
P450 51A2, CYTOCHROME P450 51G1,
embryo defective 1738		 0.76 0.29 -0.31
43 AT2G30410 tubulin folding cofactor A (KIESEL) KIESEL, TUBULIN FOLDING FACTOR A 0.76 0.33 -0.3
44 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.76 0.3 -0.31
45 AT2G18910 hydroxyproline-rich glycoprotein family protein 0.76 0.32 -0.33
46 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.76 0.32 -0.3
47 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase 0.76 0.32 -0.33
48 AT5G57370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1777 (InterPro:IPR013957); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.76 0.29 -0.33
49 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 0.76 0.31 -0.32
50 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a 0.76 0.32 -0.33
51 AT2G20140 AAA-type ATPase family protein regulatory particle AAA-ATPase 2b 0.75 0.34 -0.32
52 AT3G49430 SER/ARG-rich protein 34A Serine/Arginine-Rich Protein
Splicing Factor 34a,
Serine/Arginine-Rich Protein
Splicing Factor 34a, SER/ARG-rich
protein 34A		 0.75 0.33 -0.31
53 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.34 -0.31
54 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 0.75 0.29 -0.32
55 AT1G55160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.34 -0.29
56 AT1G78040 Pollen Ole e 1 allergen and extensin family protein 0.75 0.32 -0.3
57 AT3G06060 NAD(P)-binding Rossmann-fold superfamily protein TSC10A 0.75 0.32 -0.3
58 AT1G64640 early nodulin-like protein 8 AtENODL8, early nodulin-like
protein 8		 0.75 0.32 -0.31
59 AT5G27450 mevalonate kinase mevalonate kinase, MEVALONATE
KINASE		 0.75 0.33 -0.33
60 AT5G49170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G06840.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.3 -0.31
61 AT5G01460 LMBR1-like membrane protein 0.75 0.29 -0.3
62 AT3G49680 branched-chain aminotransferase 3 ATBCAT-3, branched-chain
aminotransferase 3		 0.75 0.32 -0.3
63 AT3G58120 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP61, BZIP61 0.75 0.34 -0.32
64 AT3G61140 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 ARABIDOPSIS THALIANA FUSCA 6,
SHAGGY-LIKE KINASE 31,
CONSTITUTIVE PHOTOMORPHOGENIC 11,
COP9 SIGNALOSOME SUBUNIT 1, EMBRYO
DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE
KINASE 31		 0.75 0.33 -0.28
65 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 0.75 0.3 -0.31
66 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.73 0.31 -0.3
67 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.73 0.31 -0.3
68 AT3G27210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25
species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7;
Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source:
NCBI BLink).		 -0.71 0.3 -0.33
69 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.71 0.31 -0.31
70 AT3G29575 ABI five binding protein 3 ABI five binding protein 3 -0.7 0.3 -0.33
71 AT1G50410 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.7 0.31 -0.34
72 AT5G17850 Sodium/calcium exchanger family protein -0.7 0.33 -0.32
73 AT5G63560 HXXXD-type acyl-transferase family protein -0.69 0.33 -0.33
74 AT3G13784 cell wall invertase 5 cell wall invertase 5, cell wall
invertase 5		 -0.69 0.33 -0.32
75 AT1G56650 production of anthocyanin pigment 1 MYB DOMAIN PROTEIN 75,
MYELOBLASTOSIS PROTEIN 75,
production of anthocyanin pigment
1, SUC-INDUCED ANTHOCYANIN
ACCUMULATION 1		 -0.69 0.32 -0.32
76 AT1G80820 cinnamoyl coa reductase ATCCR2, cinnamoyl coa reductase -0.69 0.32 -0.31
77 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.69 0.31 -0.31
78 AT2G23110 Late embryogenesis abundant protein, group 6 -0.69 0.34 -0.31
79 AT5G07330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.31 -0.3
80 AT1G67920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits
to 22 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.33 -0.33
81 AT3G57530 calcium-dependent protein kinase 32 ATCPK32, CDPK32, calcium-dependent
protein kinase 32		 -0.67 0.33 -0.31
82 AT2G47770 TSPO(outer membrane tryptophan-rich sensory
protein)-related		 TSPO(outer membrane
tryptophan-rich sensory
protein)-related, TSPO(outer
membrane tryptophan-rich sensory
protein)-related		 -0.67 0.31 -0.32
83 AT1G53100 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.66 0.32 -0.31
84 AT1G12880 nudix hydrolase homolog 12 nudix hydrolase homolog 12, nudix
hydrolase homolog 12		 -0.66 0.31 -0.3
85 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.66 0.31 -0.33
86 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.3 -0.3
87 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.65 0.34 -0.32
88 AT2G47810 nuclear factor Y, subunit B5 nuclear factor Y, subunit B5 -0.65 0.31 -0.34
89 AT4G04750 Major facilitator superfamily protein -0.64 0.31 -0.31
90 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 -0.64 0.33 -0.33
91 AT5G06760 Late Embryogenesis Abundant 4-5 Late Embryogenesis Abundant 4-5,
Late Embryogenesis Abundant 4-5		 -0.64 0.31 -0.33
92 AT5G65240 Leucine-rich repeat protein kinase family protein -0.64 0.31 -0.3
93 AT1G07500 unknown protein; Has 4 Blast hits to 4 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.3 -0.33
94 AT4G12760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.78 0.43 -0.45
96 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		-0.77 0.32 -0.31 C0254
97 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.77 0.44 -0.45 C0109
98 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) -0.76 0.44 -0.44
99 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - -0.75 0.42 -0.46
100 C0029 3-Indolylacetonitrile - Indole-3-acetonitrile indole glucosinolate breakdown (insect chewing induced),
IAA biosynthesis I,
camalexin biosynthesis 		-0.66 0.3 -0.31 C0029