AT1G06820 : CAROTENOID AND CHLOROPLAST REGULATION 2
Query Information
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AGICode AT1G06820
Description carotenoid isomerase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G06820 carotenoid isomerase CAROTENOID AND CHLOROPLAST
REGULATION 2, carotenoid isomerase		 1 0.3 -0.29
2 AT3G10670 non-intrinsic ABC protein 7 ATP-binding cassette I6,
non-intrinsic ABC protein 7,
non-intrinsic ABC protein 7		 0.83 0.32 -0.32
3 AT5G40160 Ankyrin repeat family protein EMBRYO DEFECTIVE 139, embryo
defective 506		 0.81 0.29 -0.33
4 AT3G59870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G43945.1); Has 292 Blast
hits to 292 proteins in 84 species: Archae - 0; Bacteria -
122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0;
Other Eukaryotes - 124 (source: NCBI BLink).		 0.8 0.32 -0.32
5 AT4G33760 tRNA synthetase class II (D, K and N) family protein 0.79 0.33 -0.33
6 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.78 0.31 -0.33
7 AT2G19940 oxidoreductases, acting on the aldehyde or oxo group of
donors, NAD or NADP as acceptor;copper ion binding		 0.78 0.31 -0.3
8 AT2G24020 Uncharacterised BCR, YbaB family COG0718 0.78 0.32 -0.33
9 AT3G20320 trigalactosyldiacylglycerol2 ATP-binding cassette I15,
trigalactosyldiacylglycerol2		 0.77 0.33 -0.3
10 AT1G32500 non-intrinsic ABC protein 6 ATP-binding cassette I7,
non-intrinsic ABC protein 6,
non-intrinsic ABC protein 6		 0.76 0.31 -0.3
11 AT3G10350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.34 -0.29
12 AT5G49910 chloroplast heat shock protein 70-2 chloroplast heat shock protein
70-2, HEAT SHOCK PROTEIN 70-7		 0.75 0.29 -0.31
13 AT1G18440 Peptidyl-tRNA hydrolase family protein 0.75 0.33 -0.31
14 AT2G44870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.75 0.32 -0.33
15 AT1G74040 2-isopropylmalate synthase 1 2-isopropylmalate synthase 1,
SOPROPYLMALATE SYNTHASE 2, MAML-3		 0.74 0.31 -0.33
16 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.74 0.31 -0.33
17 AT4G24280 chloroplast heat shock protein 70-1 chloroplast heat shock protein
70-1		 0.74 0.3 -0.34
18 AT4G17300 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 ATNS1, NS1, ovule abortion 8 0.74 0.32 -0.32
19 AT1G12410 CLP protease proteolytic subunit 2 CLP protease proteolytic subunit
2, CLPR2, EMBRYO DEFECTIVE 3146,
NUCLEAR-ENCODED CLP PROTEASE P2		 0.74 0.32 -0.3
20 AT5G16620 hydroxyproline-rich glycoprotein family protein translocon at the inner envelope
membrane of chloroplasts 40,
pigment defective embryo 120,
translocon at the inner envelope
membrane of chloroplasts 40		 0.73 0.3 -0.31
21 AT1G51310 transferases;tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferases		 0.73 0.3 -0.33
22 AT3G09310 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast
hits to 5781 proteins in 1903 species: Archae - 0; Bacteria
- 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3;
Other Eukaryotes - 1778 (source: NCBI BLink).		 0.73 0.31 -0.33
23 AT3G15300 VQ motif-containing protein -0.73 0.31 -0.3
24 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 0.73 0.32 -0.32
25 AT2G20270 Thioredoxin superfamily protein 0.73 0.31 -0.32
26 AT1G08490 chloroplastic NIFS-like cysteine desulfurase ATCPNIFS, ATNFS2, ATSUFS,
chloroplastic NIFS-like cysteine
desulfurase, SUFS		 0.72 0.31 -0.31
27 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits
to 90 proteins in 22 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.72 0.34 -0.3
28 AT1G11750 CLP protease proteolytic subunit 6 CLP protease proteolytic subunit
6, NUCLEAR-ENCODED CLPP 1, NCLPP6		 0.72 0.3 -0.32
29 AT3G53560 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.31 -0.34
30 AT1G02560 nuclear encoded CLP protease 5 nuclear encoded CLP protease 5,
NUCLEAR-ENCODED CLPP 1, NUCLEAR
CLPP 5		 0.71 0.3 -0.32
31 AT2G36250 Tubulin/FtsZ family protein ATFTSZ2-1, FTSZ2-1 0.71 0.31 -0.33
32 AT5G63890 histidinol dehydrogenase histidinol dehydrogenase,
histidinol dehydrogenase,
HISTIDINE BIOSYNTHESIS 8		 0.7 0.31 -0.31
33 AT4G31780 monogalactosyl diacylglycerol synthase 1 EMBRYO DEFECTIVE 2797,
monogalactosyl diacylglycerol
synthase 1,
MONOGALACTOSYLDIACYLGLYCEROL
SYNTHASE A, UDP-glycosyl
transferase 81A1		 0.7 0.32 -0.31
34 AT1G77060 Phosphoenolpyruvate carboxylase family protein 0.7 0.3 -0.29
35 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 0.7 0.3 -0.31
36 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.7 0.34 -0.33
37 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)		 ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2		 0.69 0.31 -0.32
38 AT5G47435 formyltetrahydrofolate deformylase, putative 0.69 0.3 -0.3
39 AT3G13490 Lysyl-tRNA synthetase, class II ARABIDOPSIS THALIANA LYSYL-TRNA
SYNTHETASE 2, OVULE ABORTION 5		 0.69 0.31 -0.31
40 AT2G20690 lumazine-binding family protein 0.68 0.3 -0.31
41 AT5G26880 AGAMOUS-like 26 AGAMOUS-like 26 0.67 0.34 -0.31
42 AT4G33350 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-IV,
translocon at the inner envelope
membrane of chloroplasts 22-IV		 0.67 0.32 -0.32
43 AT4G27080 PDI-like 5-4 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 7, PDI-like
5-4, PROTEIN DISULFIDE ISOMERASE
7, PDI-like 5-4		 0.67 0.32 -0.32
44 AT5G16660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, membrane,
chloroplast envelope; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.67 0.3 -0.31
45 AT4G05330 ARF-GAP domain 13 ARF-GAP domain 13 0.67 0.29 -0.31
46 AT2G35360 ubiquitin family protein 0.67 0.32 -0.33
47 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 0.67 0.32 -0.32
48 AT5G50860 Protein kinase superfamily protein 0.66 0.31 -0.31
49 AT2G04480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits
to 38 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.3 -0.32
50 AT5G62180 carboxyesterase 20 carboxyesterase 20,
carboxyesterase 20		 -0.64 0.35 -0.32
51 AT4G36430 Peroxidase superfamily protein -0.62 0.3 -0.33
52 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1		 -0.61 0.32 -0.31
53 AT4G12910 serine carboxypeptidase-like 20 serine carboxypeptidase-like 20 -0.6 0.33 -0.35
54 AT1G34110 Leucine-rich receptor-like protein kinase family protein -0.59 0.33 -0.33
55 AT5G10720 histidine kinase 5 histidine kinase 5, CYTOKININ
INDEPENDENT 2, histidine kinase 5		 -0.58 0.31 -0.31
56 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.58 0.32 -0.32
57 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 -0.58 0.32 -0.31
58 AT1G64620 Dof-type zinc finger DNA-binding family protein -0.57 0.31 -0.33
59 AT3G13650 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.56 0.29 -0.34
60 AT5G48650 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.56 0.3 -0.32
61 AT2G38490 CBL-interacting protein kinase 22 CBL-interacting protein kinase 22,
SNF1-RELATED PROTEIN KINASE 3.19		 -0.54 0.35 -0.33
62 AT4G38210 expansin A20 ATEXP20, expansin A20, ATHEXP
ALPHA 1.23, EXPANSIN 20, expansin
A20		 -0.54 0.31 -0.31
63 AT5G43690 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.54 0.31 -0.34
64 AT3G08570 Phototropic-responsive NPH3 family protein -0.54 0.3 -0.32
65 AT2G18100 Protein of unknown function (DUF726) -0.52 0.31 -0.33
66 AT5G60200 TARGET OF MONOPTEROS 6 TARGET OF MONOPTEROS 6 -0.52 0.31 -0.32
67 AT4G31890 ARM repeat superfamily protein -0.51 0.32 -0.31
68 AT5G53320 Leucine-rich repeat protein kinase family protein -0.5 0.34 -0.3
69 AT2G43660 Carbohydrate-binding X8 domain superfamily protein -0.5 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0143 Maltitol - - starch degradation II -0.75 0.46 -0.46
71 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II -0.68 0.46 -0.44 C0146