AT1G29220 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G29220
Description transcriptional regulator family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G29220 transcriptional regulator family protein 1 0.32 -0.31
2 AT2G14040 transposable element gene 0.71 0.34 -0.3
3 AT3G52080 cation/hydrogen exchanger 28 cation/hydrogen exchanger 28 0.7 0.32 -0.3
4 AT2G10870 transposable element gene -0.7 0.33 -0.32
5 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 -0.69 0.31 -0.32
6 ATMG00010 hypothetical protein ORF153A -0.69 0.3 -0.32
7 AT4G24460 CRT (chloroquine-resistance transporter)-like transporter 2 CRT (chloroquine-resistance
transporter)-like transporter 2		 0.68 0.32 -0.31
8 AT1G75890 GDSL-like Lipase/Acylhydrolase superfamily protein 0.68 0.31 -0.32
9 AT1G21430 Flavin-binding monooxygenase family protein YUC11 0.67 0.29 -0.32
10 AT2G41580 transposable element gene -0.67 0.3 -0.29
11 AT3G42260 transposable element gene 0.67 0.32 -0.33
12 AT1G74080 myb domain protein 122 MYB DOMAIN PROTEIN 122, myb domain
protein 122		 -0.66 0.29 -0.28
13 AT2G34180 CBL-interacting protein kinase 13 WPL4-LIKE 2, CBL-interacting
protein kinase 13, SNF1-RELATED
PROTEIN KINASE 3.7, WPL4-LIKE 2		 -0.66 0.33 -0.32
14 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 -0.66 0.29 -0.31
15 AT4G10850 Nodulin MtN3 family protein AtSWEET7, SWEET7 0.66 0.32 -0.32
16 AT1G56380 Mitochondrial transcription termination factor family
protein		 0.65 0.31 -0.32
17 AT1G01980 FAD-binding Berberine family protein 0.65 0.31 -0.31
18 AT2G44810 alpha/beta-Hydrolases superfamily protein DEFECTIVE ANTHER DEHISCENCE 1 0.65 0.32 -0.32
19 AT5G61980 ARF-GAP domain 1 ARF-GAP domain 1 -0.64 0.34 -0.31
20 AT3G20860 NIMA-related kinase 5 NIMA-related kinase 5,
NIMA-related kinase 5		 0.64 0.3 -0.32
21 AT1G72290 Kunitz family trypsin and protease inhibitor protein 0.64 0.33 -0.34
22 AT5G22420 fatty acid reductase 7 fatty acid reductase 7 -0.64 0.31 -0.33
23 AT1G54170 CTC-interacting domain 3 CTC-interacting domain 3 0.64 0.32 -0.33
24 AT2G15880 Leucine-rich repeat (LRR) family protein -0.64 0.32 -0.32
25 AT3G02550 LOB domain-containing protein 41 LOB domain-containing protein 41 -0.64 0.3 -0.33
26 AT2G03410 Mo25 family protein -0.64 0.32 -0.32
27 AT4G34400 AP2/B3-like transcriptional factor family protein 0.64 0.3 -0.3
28 AT1G50250 FTSH protease 1 FTSH protease 1 0.63 0.31 -0.3
29 AT5G65180 ENTH/VHS family protein -0.63 0.34 -0.33
30 AT2G46480 galacturonosyltransferase 2 galacturonosyltransferase 2,
GALACTURONOSYLTRANSFERASE 2		 0.63 0.31 -0.3
31 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein -0.63 0.31 -0.3
32 AT5G50020 DHHC-type zinc finger family protein -0.63 0.31 -0.32
33 AT2G15700 transposable element gene 0.63 0.31 -0.3
34 AT1G04670 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.32 -0.32
35 AT3G10040 sequence-specific DNA binding transcription factors -0.62 0.28 -0.31
36 AT1G15190 Fasciclin-like arabinogalactan family protein 0.62 0.33 -0.32
37 AT3G30843 transposable element gene -0.62 0.34 -0.32
38 AT2G35635 ubiquitin 7 RELATED TO UBIQUITIN 2, ubiquitin
7		 -0.62 0.32 -0.32
39 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.32 -0.32
40 AT5G25430 HCO3- transporter family -0.62 0.32 -0.32
41 AT2G15510 transposable element gene -0.62 0.31 -0.32
42 AT4G10750 Phosphoenolpyruvate carboxylase family protein -0.62 0.3 -0.31
43 AT1G38950 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.61 0.32 -0.32
44 AT2G40990 DHHC-type zinc finger family protein 0.61 0.31 -0.31
45 AT5G51480 SKU5 similar 2 SKU5 similar 2 -0.61 0.34 -0.31
46 AT1G26710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26720.1); Has 9 Blast hits to
9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.29 -0.3
47 AT1G07460 Concanavalin A-like lectin family protein -0.61 0.33 -0.3
48 AT1G28030 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.32 -0.3
49 AT2G15930 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.33 -0.29
50 AT4G26890 mitogen-activated protein kinase kinase kinase 16 mitogen-activated protein kinase
kinase kinase 16		 -0.61 0.3 -0.31
51 AT5G42955 Protein of unknown function (DUF784) 0.61 0.3 -0.3
52 AT5G64160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.32 -0.3
53 AT3G20080 cytochrome P450, family 705, subfamily A, polypeptide 15 cytochrome P450, family 705,
subfamily A, polypeptide 15		 -0.6 0.32 -0.31
54 AT3G07860 Ubiquitin-like superfamily protein 0.6 0.3 -0.32
55 AT5G18040 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G29760.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.32 -0.32
56 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.6 0.33 -0.34
57 AT3G24515 ubiquitin-conjugating enzyme 37 ubiquitin-conjugating enzyme 37 0.6 0.3 -0.29
58 AT3G59440 Calcium-binding EF-hand family protein -0.6 0.31 -0.31
59 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.6 0.33 -0.31
60 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 0.6 0.32 -0.31
61 AT3G44910 cation/H+ exchanger 12 ATCHX12, cation/H+ exchanger 12 0.6 0.32 -0.32
62 AT2G38830 Ubiquitin-conjugating enzyme/RWD-like protein -0.6 0.32 -0.31
63 AT3G43680 transposable element gene -0.6 0.33 -0.31
64 AT1G68875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.59 0.31 -0.33
65 AT2G35100 Exostosin family protein ARABINAN DEFICIENT 1 -0.59 0.32 -0.31
66 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
I		 0.59 0.3 -0.31
67 AT1G63070 pentatricopeptide (PPR) repeat-containing protein -0.59 0.32 -0.31
68 AT4G18400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.59 0.32 -0.29
69 AT3G27440 uridine kinase-like 5 uridine kinase-like 5 -0.59 0.3 -0.3
70 AT2G01810 RING/FYVE/PHD zinc finger superfamily protein -0.59 0.31 -0.33
71 AT1G30100 nine-cis-epoxycarotenoid dioxygenase 5 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 5,
nine-cis-epoxycarotenoid
dioxygenase 5		 0.59 0.33 -0.33
72 AT3G05280 Integral membrane Yip1 family protein -0.59 0.34 -0.31
73 AT2G23040 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.32 -0.31
74 AT2G20500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 13 Blast hits to 13 proteins
in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.58 0.28 -0.33
75 AT4G31390 Protein kinase superfamily protein 0.58 0.32 -0.34
76 AT2G23250 UDP-glucosyl transferase 84B2 UDP-glucosyl transferase 84B2 -0.58 0.32 -0.31
77 AT1G73440 calmodulin-related 0.58 0.31 -0.32
78 AT5G42750 BRI1 kinase inhibitor 1 BRI1 kinase inhibitor 1 -0.58 0.32 -0.31
79 AT4G36940 nicotinate phosphoribosyltransferase 1 nicotinate
phosphoribosyltransferase 1		 0.58 0.31 -0.34
80 AT1G61430 S-locus lectin protein kinase family protein -0.58 0.34 -0.29
81 AT1G12190 F-box and associated interaction domains-containing protein -0.58 0.31 -0.35
82 AT3G56550 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.33 -0.35
83 AT1G50160 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT2G04420.1); Has 34 Blast hits to 34 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.32
84 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.33 -0.32
85 AT2G37140 Terpenoid synthases superfamily protein -0.58 0.32 -0.31
86 AT3G13780 SMAD/FHA domain-containing protein -0.57 0.31 -0.33
87 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 0.57 0.31 -0.33
88 AT3G53550 FBD-like domain family protein 0.57 0.31 -0.32
89 AT3G60790 F-box family protein 0.57 0.32 -0.33
90 AT2G10650 transposable element gene 0.57 0.32 -0.31
91 AT1G44740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower,
seed; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 8 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.31 -0.28
92 AT2G14210 AGAMOUS-like 44 AGAMOUS-like 44, ARABIDOPSIS
NITRATE REGULATED 1		 -0.57 0.31 -0.3
93 AT4G08490 transposable element gene 0.57 0.31 -0.34
94 AT3G42330 transposable element gene 0.57 0.3 -0.3
95 AT5G42660 Protein of unknown function (DUF616) -0.57 0.31 -0.29
96 AT2G22320 unknown protein; Has 7 Blast hits to 7 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.32 -0.31
97 AT3G20990 transposable element gene -0.57 0.32 -0.32
98 AT1G43940 transposable element gene -0.57 0.32 -0.32
99 AT3G46750 unknown protein; Has 2631 Blast hits to 1984 proteins in
271 species: Archae - 6; Bacteria - 163; Metazoa - 1232;
Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes -
828 (source: NCBI BLink).		 -0.57 0.32 -0.31
100 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.3 -0.32
101 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.31 -0.32
102 AT2G39950 unknown protein; Has 978 Blast hits to 254 proteins in 81
species: Archae - 0; Bacteria - 8; Metazoa - 109; Fungi -
53; Plants - 41; Viruses - 0; Other Eukaryotes - 767
(source: NCBI BLink).		 -0.56 0.32 -0.31
103 AT5G33350 pseudogene, similar to P0406H10.5, nucleoid DNA-binding
protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996;
blastp match of 37% identity and 1.5e-57 P-value to
GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza
sativa (japonica cultivar-group)}		 0.56 0.32 -0.3
104 AT5G42490 ATP binding microtubule motor family protein -0.56 0.3 -0.33
105 AT2G39830 DA1-related protein 2 DA1-related protein 2, LATERAL
ROOT DEVELOPMENT 3		 -0.56 0.33 -0.33
106 AT3G33064 transposable element gene -0.56 0.28 -0.29
107 AT1G15990 cyclic nucleotide gated channel 7 cyclic nucleotide gated channel 7,
cyclic nucleotide gated channel 7		 0.56 0.34 -0.32
108 AT3G22220 hAT transposon superfamily -0.55 0.3 -0.31
109 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85		 0.55 0.3 -0.33
110 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 0.55 0.31 -0.3
111 AT5G08200 peptidoglycan-binding LysM domain-containing protein -0.55 0.32 -0.31
112 AT5G28240 transposable element gene -0.55 0.33 -0.32
113 AT5G34450 transposable element gene 0.55 0.31 -0.31
114 AT1G08170 Histone superfamily protein -0.55 0.32 -0.31
115 AT2G07280 unknown protein; Has 19 Blast hits to 19 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.31 -0.33
116 AT5G58810 subtilisin-like serine protease, pseudogene, contains
similarity to prepro-cucumisin GI:807698 from (Cucumis
melo); non-consensus acceptor site AA at exon 6; blastp
match of 43% identity and 2.1e-113 P-value to
GP|13325079|gb|AAD02075.3||AF036960 subtilisin-like
protease C1 {Glycine max}		 0.55 0.32 -0.31
117 AT1G71470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22090.1); Has 11 Blast hits
to 11 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.55 0.34 -0.31
118 AT1G73150 global transcription factor group E3 global transcription factor group
E3		 -0.55 0.3 -0.3
119 AT5G38870 transposable element gene 0.55 0.29 -0.3
120 AT1G26170 ARM repeat superfamily protein 0.55 0.3 -0.32
121 AT1G26520 Cobalamin biosynthesis CobW-like protein 0.55 0.32 -0.29
122 AT3G06830 Plant invertase/pectin methylesterase inhibitor superfamily -0.55 0.31 -0.31
123 AT3G28630 Protein of unknown function (DUF569) 0.55 0.32 -0.31
124 AT3G42190 transposable element gene 0.55 0.31 -0.3
125 AT2G31290 Ubiquitin carboxyl-terminal hydrolase family protein 0.55 0.3 -0.32
126 AT1G28630 unknown protein; Has 647 Blast hits to 524 proteins in 85
species: Archae - 0; Bacteria - 6; Metazoa - 100; Fungi -
44; Plants - 83; Viruses - 0; Other Eukaryotes - 414
(source: NCBI BLink).		 0.54 0.32 -0.32
127 AT2G15240 UNC-50 family protein 0.54 0.34 -0.31
128 AT1G73320 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.54 0.32 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
129 C0150 Monogalactosyldiacylgycerol-34:3 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.6 0.35 -0.33
130 C0200 Phosphatidylglycerol-32:0 - Phosphatidylglycerol-32:0 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.59 0.35 -0.32
131 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.56 0.32 -0.33
132 C0203 Phosphatidylglycerol-34:1 - Phosphatidylglycerol-34:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.55 0.35 -0.31