AT1G12250 : -
Query Information
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AGICode AT1G12250
Description Pentapeptide repeat-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G12250 Pentapeptide repeat-containing protein 1 0.3 -0.31
2 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.9 0.33 -0.31
3 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein AtPLR1, pyridoxal reductase 1 0.89 0.31 -0.28
4 AT4G25080 magnesium-protoporphyrin IX methyltransferase magnesium-protoporphyrin IX
methyltransferase		 0.89 0.31 -0.32
5 AT1G26220 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.89 0.34 -0.31
6 AT4G30690 Translation initiation factor 3 protein 0.89 0.32 -0.31
7 AT2G35450 catalytics;hydrolases 0.89 0.31 -0.32
8 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.89 0.31 -0.32
9 AT3G02690 nodulin MtN21 /EamA-like transporter family protein 0.89 0.31 -0.32
10 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.89 0.35 -0.32
11 AT3G20790 NAD(P)-binding Rossmann-fold superfamily protein 0.88 0.32 -0.32
12 AT5G35790 glucose-6-phosphate dehydrogenase 1 glucose-6-phosphate dehydrogenase
1		 0.88 0.31 -0.31
13 AT3G62410 CP12 domain-containing protein 2 CP12 DOMAIN-CONTAINING PROTEIN 1,
CP12 domain-containing protein 2		 0.87 0.32 -0.31
14 AT5G36170 high chlorophyll fluorescent 109 ATPRFB, high chlorophyll
fluorescent 109		 0.87 0.32 -0.28
15 AT1G54780 thylakoid lumen 18.3 kDa protein AtTLP18.3, thylakoid lumen protein
18.3		 0.87 0.32 -0.33
16 AT3G27050 unknown protein; Has 43 Blast hits to 43 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.87 0.31 -0.32
17 AT1G69935 short hypocotyl in white light1 SHORT HYPOCOTYL IN WHITE LIGHT1 0.87 0.32 -0.32
18 AT5G01920 Protein kinase superfamily protein State transition 8 0.87 0.31 -0.33
19 AT3G25805 unknown protein; Has 98 Blast hits to 98 proteins in 45
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.87 0.3 -0.31
20 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.33 -0.32
21 AT5G51545 low psii accumulation2 low psii accumulation2 0.87 0.29 -0.31
22 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.86 0.32 -0.3
23 AT2G29310 NAD(P)-binding Rossmann-fold superfamily protein 0.86 0.31 -0.31
24 AT2G35450 catalytics;hydrolases 0.86 0.31 -0.32
25 AT2G29290 NAD(P)-binding Rossmann-fold superfamily protein 0.86 0.32 -0.31
26 AT1G01170 Protein of unknown function (DUF1138) 0.86 0.29 -0.33
27 AT2G35260 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast
hits to 42 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.33 -0.31
28 AT2G47910 chlororespiratory reduction 6 chlororespiratory reduction 6 0.85 0.31 -0.29
29 AT5G43750 NAD(P)H dehydrogenase 18 NAD(P)H dehydrogenase 18,
Photosynthetic NDH subcomplex B 5		 0.85 0.31 -0.31
30 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.85 0.32 -0.33
31 AT4G19985 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.85 0.29 -0.3
32 AT3G29240 Protein of unknown function (DUF179) 0.85 0.31 -0.33
33 AT1G35420 alpha/beta-Hydrolases superfamily protein 0.85 0.29 -0.31
34 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.85 0.3 -0.32
35 AT3G26900 shikimate kinase like 1 Arabidopsis thaliana shikimate
kinase-like 1, shikimate
kinase-like 1		 0.85 0.27 -0.34
36 AT3G29310 calmodulin-binding protein-related -0.85 0.33 -0.32
37 AT1G07440 NAD(P)-binding Rossmann-fold superfamily protein 0.85 0.33 -0.32
38 AT1G23400 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ARABIDOPSIS THALIANA HOMOLOG OF
MAIZE CAF2, CAF2		 0.85 0.31 -0.31
39 AT4G14870 secE/sec61-gamma protein transport protein SECE1 0.84 0.29 -0.31
40 AT3G62000 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.84 0.31 -0.32
41 AT3G51420 strictosidine synthase-like 4 STRICTOSIDINE SYNTHASE-LIKE 4,
strictosidine synthase-like 4		 0.84 0.34 -0.3
42 AT1G10360 glutathione S-transferase TAU 18 glutathione S-transferase TAU 18,
GLUTATHIONE S-TRANSFERASE 29,
glutathione S-transferase TAU 18		 0.84 0.29 -0.32
43 AT4G33000 calcineurin B-like protein 10 ATCBL10, calcineurin B-like
protein 10, SOS3-LIKE CALCIUM
BINDING PROTEIN 8		 0.84 0.34 -0.3
44 AT5G13730 sigma factor 4 sigma factor 4, SIGD 0.83 0.28 -0.32
45 AT1G75100 J-domain protein required for chloroplast accumulation
response 1		 J-domain protein required for
chloroplast accumulation response
1		 0.83 0.31 -0.33
46 AT1G23310 glutamate:glyoxylate aminotransferase ALANINE-2-OXOGLUTARATE
AMINOTRANSFERASE 1,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 1,
glutamate:glyoxylate
aminotransferase		 0.83 0.31 -0.33
47 AT5G52440 Bacterial sec-independent translocation protein mttA/Hcf106 HIGH CHLOROPHYLL FLUORESCENCE 106 0.83 0.31 -0.32
48 AT1G79040 photosystem II subunit R photosystem II subunit R 0.83 0.31 -0.32
49 AT4G35760 NAD(P)H dehydrogenase (quinone)s 0.83 0.32 -0.32
50 AT4G05090 Inositol monophosphatase family protein 0.83 0.3 -0.3
51 AT5G14260 Rubisco methyltransferase family protein 0.82 0.33 -0.29
52 AT5G16940 carbon-sulfur lyases 0.82 0.34 -0.33
53 AT2G17033 pentatricopeptide (PPR) repeat-containing protein 0.82 0.33 -0.33
54 AT5G54290 cytochrome c biogenesis protein family CcdA 0.82 0.31 -0.33
55 AT5G64460 Phosphoglycerate mutase family protein 0.82 0.33 -0.31
56 AT3G12210 DNA binding 0.82 0.31 -0.3
57 AT5G44520 NagB/RpiA/CoA transferase-like superfamily protein 0.82 0.31 -0.32
58 AT1G16720 high chlorophyll fluorescence phenotype 173 high chlorophyll fluorescence
phenotype 173		 0.82 0.31 -0.29
59 AT4G26555 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.82 0.32 -0.31
60 AT1G05140 Peptidase M50 family protein 0.82 0.31 -0.31
61 AT1G51400 Photosystem II 5 kD protein 0.82 0.33 -0.32
62 AT4G15930 Dynein light chain type 1 family protein 0.82 0.31 -0.3
63 AT5G16400 thioredoxin F2 ATF2, thioredoxin F2 0.82 0.3 -0.33
64 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.82 0.3 -0.33
65 AT1G45474 photosystem I light harvesting complex gene 5 photosystem I light harvesting
complex gene 5		 0.82 0.31 -0.33
66 AT4G25910 NFU domain protein 3 ATCNFU3, NFU domain protein 3 0.82 0.31 -0.33
67 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 0.82 0.32 -0.29
68 AT3G17470 Ca2+-activated RelA/spot homolog ATCRSH, Ca2+-activated RelA/spot
homolog		 0.82 0.31 -0.3
69 AT5G02160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 121
Blast hits to 121 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.31 -0.3
70 AT5G47900 Protein of unknown function (DUF1624) 0.81 0.3 -0.32
71 AT1G49180 protein kinase family protein 0.81 0.32 -0.31
72 AT1G30520 acyl-activating enzyme 14 acyl-activating enzyme 14 0.81 0.32 -0.31
73 AT2G46210 Fatty acid/sphingolipid desaturase AtSLD2, sphingoid LCB desaturase 2 0.81 0.31 -0.31
74 AT4G27800 thylakoid-associated phosphatase 38 PROTEIN PHOSPHATASE 1,
thylakoid-associated phosphatase
38		 0.81 0.31 -0.34
75 AT1G61140 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 embryo sac development arrest 16 -0.78 0.33 -0.32
76 AT1G07510 FTSH protease 10 FTSH protease 10 -0.76 0.29 -0.3
77 AT3G47780 ABC2 homolog 6 ATP-binding cassette A7, A.
THALIANA ABC2 HOMOLOG 6, ABC2
homolog 6		 -0.75 0.32 -0.32
78 AT2G24570 WRKY DNA-binding protein 17 ATWRKY17, WRKY DNA-binding protein
17		 -0.75 0.31 -0.31
79 AT2G35736 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G25225.1); Has 78 Blast hits to 78 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.32 -0.33
80 AT5G58210 hydroxyproline-rich glycoprotein family protein -0.75 0.32 -0.32
81 AT1G18390 Protein kinase superfamily protein -0.73 0.31 -0.33
82 AT1G08620 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 PKDM7D -0.73 0.32 -0.31
83 AT3G03050 cellulose synthase-like D3 CELLULOSE SYNTHASE LIKE D3,
cellulose synthase-like D3, KOJAK,
ROOT HAIR DEFECTIVE 7		 -0.73 0.3 -0.31
84 AT1G08030 tyrosylprotein sulfotransferase active quiescent center1,
tyrosylprotein sulfotransferase		 -0.72 0.31 -0.33
85 AT1G44170 aldehyde dehydrogenase 3H1 aldehyde dehydrogenase 3H1,
aldehyde dehydrogenase 4		 -0.72 0.31 -0.33
86 AT4G14580 CBL-interacting protein kinase 4 CBL-interacting protein kinase 4,
SNF1-RELATED PROTEIN KINASE 3.3		 -0.71 0.3 -0.31
87 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.71 0.31 -0.33
88 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 -0.71 0.32 -0.32
89 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 -0.71 0.32 -0.31
90 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 -0.71 0.31 -0.34
91 AT1G68690 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 9, proline-rich
extensin-like receptor kinase 9		 -0.7 0.32 -0.32
92 AT1G06780 galacturonosyltransferase 6 galacturonosyltransferase 6 -0.7 0.31 -0.31
93 AT5G56350 Pyruvate kinase family protein -0.7 0.32 -0.32
94 AT3G25585 aminoalcoholphosphotransferase aminoalcoholphosphotransferase,
ATAAPT2		 -0.69 0.31 -0.3
95 AT1G11390 Protein kinase superfamily protein -0.69 0.35 -0.32
96 AT5G35735 Auxin-responsive family protein -0.68 0.32 -0.31
97 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 -0.68 0.31 -0.31
98 AT2G18200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G18210.1); Has 19 Blast hits to 19
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.32 -0.32
99 AT3G01040 galacturonosyltransferase 13 galacturonosyltransferase 13 -0.66 0.3 -0.31
100 AT1G17500 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.66 0.32 -0.32
101 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 -0.66 0.29 -0.34
102 AT4G33430 BRI1-associated receptor kinase ATBAK1, SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 3,
BRI1-associated receptor kinase,
ELONGATED, RECEPTOR KINASES LIKE
SERK 10, SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 3		 -0.65 0.32 -0.33
103 AT4G04180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.32 -0.34
104 AT3G62240 RING/U-box superfamily protein -0.65 0.3 -0.3
105 AT5G23720 dual specificity protein phosphatase family protein PROPYZAMIDE-HYPERSENSITIVE 1 -0.65 0.32 -0.35