AT1G53490 : -
Query Information
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AGICode AT1G53490
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G53490 RING/U-box superfamily protein 1 0.33 -0.3
2 AT1G10560 plant U-box 18 ARABIDOPSIS THALIANA PLANT U-BOX
18, plant U-box 18		 -0.61 0.32 -0.3
3 AT4G21200 gibberellin 2-oxidase 8 ARABIDOPSIS THALIANA GIBBERELLIN
2-OXIDASE 8, gibberellin 2-oxidase
8		 0.61 0.3 -0.31
4 AT5G57730 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.31 -0.34
5 AT1G08670 ENTH/VHS family protein -0.6 0.31 -0.29
6 AT2G37730 Protein of unknown function (DUF604) -0.59 0.3 -0.33
7 AT3G50060 myb domain protein 77 myb domain protein 77 -0.58 0.3 -0.32
8 AT5G17780 alpha/beta-Hydrolases superfamily protein 0.57 0.32 -0.32
9 AT1G11915 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.32 -0.31
10 AT1G19140 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ubiquinone biosynthetic process; LOCATED IN: mitochondrion;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: COQ9
(InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9
(InterPro:IPR012762); Has 748 Blast hits to 748 proteins in
260 species: Archae - 0; Bacteria - 218; Metazoa - 126;
Fungi - 101; Plants - 39; Viruses - 0; Other Eukaryotes -
264 (source: NCBI BLink).		 0.55 0.28 -0.31
11 AT5G28040 DNA-binding storekeeper protein-related transcriptional
regulator		 0.55 0.3 -0.31
12 AT5G19640 Major facilitator superfamily protein 0.54 0.34 -0.3
13 AT4G30070 low-molecular-weight cysteine-rich 59 low-molecular-weight cysteine-rich
59		 -0.54 0.29 -0.32
14 AT4G36550 ARM repeat superfamily protein -0.54 0.31 -0.31
15 AT3G50170 Plant protein of unknown function (DUF247) 0.54 0.31 -0.31
16 AT4G34660 SH3 domain-containing protein 0.53 0.3 -0.31
17 AT1G72660 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.53 0.32 -0.31
18 AT5G56770 BEST Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 41 Blast hits to 41
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.53 0.32 -0.3
19 AT1G58170 Disease resistance-responsive (dirigent-like protein)
family protein		 0.52 0.3 -0.32
20 AT2G38520 transposable element gene -0.52 0.31 -0.32
21 AT4G01880 methyltransferases 0.51 0.32 -0.3
22 AT4G21230 cysteine-rich RLK (RECEPTOR-like protein kinase) 27 cysteine-rich RLK (RECEPTOR-like
protein kinase) 27		 -0.51 0.33 -0.31
23 AT5G38450 cytochrome P450, family 735, subfamily A, polypeptide 1 cytochrome P450, family 735,
subfamily A, polypeptide 1		 -0.51 0.3 -0.31
24 AT5G51190 Integrase-type DNA-binding superfamily protein -0.51 0.32 -0.29
25 AT3G57930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits
to 1241 proteins in 182 species: Archae - 0; Bacteria - 60;
Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30;
Other Eukaryotes - 593 (source: NCBI BLink).		 -0.51 0.32 -0.33
26 AT2G34820 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.51 0.32 -0.33
27 AT3G30830 transposable element gene -0.51 0.33 -0.31
28 AT1G33670 Leucine-rich repeat (LRR) family protein -0.51 0.33 -0.34
29 AT5G25060 RNA recognition motif (RRM)-containing protein 0.51 0.32 -0.33
30 AT4G35540 zinc ion binding;transcription regulators -0.5 0.32 -0.35
31 AT4G27654 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.5 0.32 -0.31
32 AT1G74930 Integrase-type DNA-binding superfamily protein ORA47 -0.5 0.32 -0.32
33 AT5G42700 AP2/B3-like transcriptional factor family protein -0.5 0.31 -0.32
34 AT5G59730 exocyst subunit exo70 family protein H7 exocyst subunit exo70 family
protein H7, exocyst subunit exo70
family protein H7		 -0.5 0.29 -0.29
35 AT4G34870 rotamase cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
1, rotamase cyclophilin 5		 0.5 0.3 -0.33
36 AT4G34410 redox responsive transcription factor 1 redox responsive transcription
factor 1		 -0.5 0.33 -0.32
37 AT3G48950 Pectin lyase-like superfamily protein -0.49 0.32 -0.31
38 AT5G29030 pseudogene, hypothetical protein -0.49 0.31 -0.31
39 AT2G23830 PapD-like superfamily protein -0.49 0.33 -0.3
40 AT5G26640 BEST Arabidopsis thaliana protein match is:
anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2);
Has 293 Blast hits to 293 proteins in 137 species: Archae -
0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41;
Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).		 -0.49 0.3 -0.32
41 AT4G29780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits
to 944 proteins in 87 species: Archae - 0; Bacteria - 0;
Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink).		 -0.49 0.31 -0.31
42 AT5G37050 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: sorting nexin 2A
(TAIR:AT5G58440.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.48 0.31 -0.32
43 AT5G47230 ethylene responsive element binding factor 5 ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR- 5, ETHYLENE
RESPONSIVE ELEMENT BINDING FACTOR
5, ethylene responsive element
binding factor 5		 -0.48 0.31 -0.31
44 AT4G24470 GATA-type zinc finger protein with TIFY domain GATA TRANSCRIPTION FACTOR 25,
TIFY1, Zinc-finger protein
expressed in Inflorescence
Meristem		 0.48 0.3 -0.3
45 AT4G30430 tetraspanin9 tetraspanin9 -0.47 0.32 -0.32
46 AT5G52400 cytochrome P450, family 715, subfamily A, polypeptide 1 cytochrome P450, family 715,
subfamily A, polypeptide 1		 -0.47 0.33 -0.32
47 AT2G38840 Guanylate-binding family protein -0.46 0.31 -0.3
48 AT2G10740 transposable element gene -0.46 0.31 -0.33
49 AT1G29490 SAUR-like auxin-responsive protein family 0.46 0.32 -0.33
50 AT2G16340 unknown protein; Has 64 Blast hits to 48 proteins in 21
species: Archae - 2; Bacteria - 36; Metazoa - 11; Fungi -
6; Plants - 3; Viruses - 2; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.46 0.33 -0.31
51 AT3G06280 F-box associated ubiquitination effector family protein -0.46 0.33 -0.3
52 AT5G03795 Exostosin family protein -0.46 0.32 -0.32
53 AT4G00220 Lateral organ boundaries (LOB) domain family protein JAGGED LATERAL ORGANS, LOB
DOMAIN-CONTAINING PROTEIN 30		 0.45 0.31 -0.31
54 AT5G62160 zinc transporter 12 precursor zinc transporter 12 precursor,
zinc transporter 12 precursor		 -0.45 0.33 -0.33
55 AT4G33230 Plant invertase/pectin methylesterase inhibitor superfamily -0.45 0.3 -0.31
56 AT1G23700 Protein kinase superfamily protein -0.45 0.3 -0.29
57 AT1G23510 unknown protein; BEST Arabidopsis thaliana protein match
is: Domain of unknown function (DUF220) (TAIR:AT1G23520.1);
Has 133 Blast hits to 120 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.45 0.31 -0.32
58 AT4G14368 Regulator of chromosome condensation (RCC1) family protein 0.45 0.32 -0.31
59 AT2G04440 MutT/nudix family protein 0.44 0.33 -0.31
60 AT1G14490 Predicted AT-hook DNA-binding family protein 0.44 0.3 -0.31
61 AT5G61260 Plant calmodulin-binding protein-related 0.44 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
62 C0101 Glutamic acid D,L-Glutamic acid L-Glutamate; D-Glutamate tyrosine biosynthesis I,
serine biosynthesis,
tyrosine degradation I,
uridine-5'-phosphate biosynthesis,
proline biosynthesis III,
glutamate biosynthesis V,
glycine biosynthesis,
lysine biosynthesis VI,
leucine biosynthesis,
UDP-N-acetyl-D-glucosamine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle (plant pathway),
L-Ndelta-acetylornithine biosynthesis,
tryptophan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
4-hydroxyphenylpyruvate biosynthesis,
proline degradation II,
photorespiration,
5-aminoimidazole ribonucleotide biosynthesis I,
folate polyglutamylation,
ammonia assimilation cycle II,
arginine degradation VI (arginase 2 pathway),
asparagine biosynthesis III (tRNA-dependent),
tetrahydrofolate biosynthesis II,
glutamine biosynthesis III,
valine degradation I,
glucosinolate biosynthesis from dihomomethionine,
phenylalanine biosynthesis II,
citrulline biosynthesis,
gamma-glutamyl cycle,
indole-3-acetyl-amino acid biosynthesis,
purine nucleotides de novo biosynthesis II,
IAA biosynthesis I,
NAD biosynthesis I (from aspartate),
alanine biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
glucosinolate biosynthesis from homomethionine,
phenylalanine degradation III,
ornithine biosynthesis,
glutathione-mediated detoxification II,
pyrimidine ribonucleotides interconversion,
indole glucosinolate breakdown (active in intact plant cell),
aspartate degradation II,
glucosinolate biosynthesis from trihomomethionine,
glucosinolate biosynthesis from tetrahomomethionine,
L-glutamine biosynthesis II (tRNA-dependent),
camalexin biosynthesis,
glutathione biosynthesis,
aspartate biosynthesis,
leucine degradation I,
glutathione degradation,
pyridine nucleotide cycling (plants),
glutamate degradation I,
valine biosynthesis,
glucosinolate biosynthesis from tryptophan,
arginine biosynthesis II (acetyl cycle),
isoleucine biosynthesis I (from threonine),
arginine biosynthesis I,
arginine degradation I (arginase pathway),
glucosinolate biosynthesis from hexahomomethionine,
tetrapyrrole biosynthesis I,
alanine degradation III,
pyridoxal 5'-phosphate biosynthesis II,
glutamate biosynthesis IV,
glutamate degradation IV,
asparagine biosynthesis I,
histidine biosynthesis,
lysine degradation II,
pantothenate biosynthesis,
isoleucine degradation I,
folate polyglutamylation II,
glutamine biosynthesis I,
glucosinolate biosynthesis from phenylalanine,
tyrosine biosynthesis II,
nitrate reduction II (assimilatory),
alanine degradation II (to D-lactate) 		-0.59 0.33 -0.32 C0101