AGICode | AT1G26460 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G26460 | Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | 0.32 | -0.29 | |||
2 | AT3G62360 | Carbohydrate-binding-like fold | 0.8 | 0.32 | -0.32 | |||
3 | AT3G02650 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.8 | 0.32 | -0.34 | |||
4 | AT1G10950 | transmembrane nine 1 | AtTMN1, transmembrane nine 1 | 0.8 | 0.3 | -0.34 | ||
5 | AT2G21390 | Coatomer, alpha subunit | 0.77 | 0.31 | -0.32 | |||
6 | AT1G76020 | Thioredoxin superfamily protein | -0.75 | 0.31 | -0.29 | |||
7 | AT4G24330 | Protein of unknown function (DUF1682) | 0.75 | 0.33 | -0.31 | |||
8 | AT3G17430 | Nucleotide-sugar transporter family protein | 0.75 | 0.3 | -0.31 | |||
9 | AT1G29880 | glycyl-tRNA synthetase / glycine--tRNA ligase | 0.75 | 0.31 | -0.32 | |||
10 | AT3G59020 | ARM repeat superfamily protein | 0.73 | 0.33 | -0.31 | |||
11 | AT3G61240 | DEA(D/H)-box RNA helicase family protein | 0.72 | 0.34 | -0.31 | |||
12 | AT1G71400 | receptor like protein 12 | receptor like protein 12, receptor like protein 12 |
0.72 | 0.31 | -0.31 | ||
13 | AT1G73240 | CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.31 | -0.32 | |||
14 | AT3G07060 | NHL domain-containing protein | embryo defective 1974 | 0.72 | 0.33 | -0.32 | ||
15 | AT5G56520 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.72 | 0.31 | -0.31 | |||
16 | AT3G28720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). |
0.72 | 0.31 | -0.32 | |||
17 | AT4G34480 | O-Glycosyl hydrolases family 17 protein | -0.71 | 0.33 | -0.3 | |||
18 | AT5G60960 | Pentatricopeptide repeat (PPR) superfamily protein | PPR protein localized to the nucleus and mitochondria 1 |
0.71 | 0.31 | -0.32 | ||
19 | AT3G54980 | Pentatricopeptide repeat (PPR) superfamily protein | 0.71 | 0.34 | -0.32 | |||
20 | AT1G52870 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | -0.71 | 0.31 | -0.31 | |||
21 | AT4G21150 | ribophorin II (RPN2) family protein | HAPLESS 6 | 0.7 | 0.31 | -0.31 | ||
22 | AT4G38200 | SEC7-like guanine nucleotide exchange family protein | 0.7 | 0.32 | -0.33 | |||
23 | AT1G19520 | pentatricopeptide (PPR) repeat-containing protein | NUCLEAR FUSION DEFECTIVE 5 | 0.7 | 0.34 | -0.3 | ||
24 | AT4G08980 | F-BOX WITH WD-40 2 | F-BOX WITH WD-40 2 | -0.7 | 0.31 | -0.31 | ||
25 | AT2G32730 | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit |
0.7 | 0.34 | -0.3 | |||
26 | AT5G19690 | staurosporin and temperature sensitive 3-like A | staurosporin and temperature sensitive 3-like A |
0.69 | 0.3 | -0.35 | ||
27 | AT3G57650 | lysophosphatidyl acyltransferase 2 | lysophosphatidyl acyltransferase 2 | 0.69 | 0.3 | -0.31 | ||
28 | AT1G43690 | ubiquitin interaction motif-containing protein | 0.69 | 0.32 | -0.31 | |||
29 | AT5G63080 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.69 | 0.33 | -0.32 | |||
30 | AT3G23610 | dual specificity protein phosphatase 1 | dual specificity protein phosphatase 1 |
-0.69 | 0.31 | -0.32 | ||
31 | AT1G08040 | Protein of unknown function (DUF707) | -0.69 | 0.33 | -0.3 | |||
32 | AT1G12680 | phosphoenolpyruvate carboxylase-related kinase 2 | phosphoenolpyruvate carboxylase-related kinase 2 |
-0.69 | 0.32 | -0.31 | ||
33 | AT1G01140 | CBL-interacting protein kinase 9 | CBL-interacting protein kinase 9, PROTEIN KINASE 6, SNF1-RELATED PROTEIN KINASE 3.12 |
-0.68 | 0.31 | -0.3 | ||
34 | AT5G09330 | NAC domain containing protein 82 | NAC domain containing protein 82, NAC domain containing protein 82, VND-interacting 1 |
0.68 | 0.33 | -0.34 | ||
35 | AT5G13110 | glucose-6-phosphate dehydrogenase 2 | glucose-6-phosphate dehydrogenase 2 |
0.68 | 0.29 | -0.3 | ||
36 | AT1G70590 | F-box family protein | -0.68 | 0.29 | -0.31 | |||
37 | AT5G01880 | RING/U-box superfamily protein | -0.68 | 0.31 | -0.33 | |||
38 | AT5G10840 | Endomembrane protein 70 protein family | 0.68 | 0.3 | -0.32 | |||
39 | AT3G16480 | mitochondrial processing peptidase alpha subunit | mitochondrial processing peptidase alpha subunit |
0.68 | 0.32 | -0.31 | ||
40 | AT4G30190 | H(+)-ATPase 2 | H(+)-ATPase 2, H(+)-ATPase 2, PLASMA MEMBRANE PROTON ATPASE 2 |
0.68 | 0.32 | -0.31 | ||
41 | AT3G27190 | uridine kinase-like 2 | uridine kinase-like 2 | 0.68 | 0.32 | -0.31 | ||
42 | AT1G70190 | Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like |
0.67 | 0.31 | -0.32 | |||
43 | AT5G62470 | myb domain protein 96 | MYB DOMAIN PROTEIN 96, myb domain protein 96, MYBCOV1 |
-0.67 | 0.3 | -0.31 | ||
44 | AT1G76730 | NagB/RpiA/CoA transferase-like superfamily protein | -0.67 | 0.3 | -0.32 | |||
45 | AT1G35220 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). |
0.67 | 0.32 | -0.31 | |||
46 | AT4G04470 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | PMP22 | -0.67 | 0.34 | -0.3 | ||
47 | AT2G37310 | Pentatricopeptide repeat (PPR) superfamily protein | 0.66 | 0.32 | -0.3 | |||
48 | AT4G29070 | Phospholipase A2 family protein | -0.66 | 0.31 | -0.34 | |||
49 | AT3G24440 | Fibronectin type III domain-containing protein | VIN3-LIKE 1, VERNALIZATION 5 | 0.66 | 0.33 | -0.32 | ||
50 | AT1G51590 | alpha-mannosidase 1 | ALPHA-MANNOSIDASE IB, alpha-mannosidase 1 |
0.66 | 0.31 | -0.3 | ||
51 | AT2G28520 | vacuolar proton ATPase A1 | vacuolar proton ATPase A1 | 0.66 | 0.31 | -0.3 | ||
52 | AT5G61880 | Protein Transporter, Pam16 | 0.66 | 0.33 | -0.3 | |||
53 | AT3G20550 | SMAD/FHA domain-containing protein | DAWDLE | -0.66 | 0.32 | -0.35 | ||
54 | AT5G14400 | cytochrome P450, family 724, subfamily A, polypeptide 1 | cytochrome P450, family 724, subfamily A, polypeptide 1 |
-0.66 | 0.31 | -0.32 | ||
55 | AT3G07660 | Kinase-related protein of unknown function (DUF1296) | 0.66 | 0.31 | -0.3 | |||
56 | AT4G10250 | HSP20-like chaperones superfamily protein | ATHSP22.0 | -0.65 | 0.33 | -0.33 | ||
57 | AT5G45630 | Protein of unknown function, DUF584 | -0.65 | 0.3 | -0.33 | |||
58 | AT3G09090 | defective in exine formation protein (DEX1) | DEFECTIVE IN EXINE FORMATION 1 | 0.65 | 0.32 | -0.32 | ||
59 | AT3G52030 | F-box family protein with WD40/YVTN repeat doamin | -0.65 | 0.3 | -0.33 | |||
60 | AT3G43420 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.32 | -0.3 | |||
61 | AT3G01130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.32 | -0.32 | |||
62 | AT3G58010 | plastoglobulin 34kD | plastoglobulin 34kD | -0.65 | 0.33 | -0.32 | ||
63 | AT2G19110 | heavy metal atpase 4 | ARABIDOPSIS HEAVY METAL ATPASE 4, heavy metal atpase 4 |
0.65 | 0.32 | -0.33 | ||
64 | AT3G19790 | unknown protein; Has 32 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2; Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.65 | 0.33 | -0.32 | |||
65 | AT1G21065 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). |
-0.65 | 0.32 | -0.33 | |||
66 | AT2G15042 | Leucine-rich repeat (LRR) family protein | -0.64 | 0.32 | -0.32 | |||
67 | AT4G10000 | Thioredoxin family protein | -0.64 | 0.31 | -0.31 | |||
68 | AT5G14950 | golgi alpha-mannosidase II | ATGMII, golgi alpha-mannosidase II | 0.64 | 0.31 | -0.31 | ||
69 | AT1G67440 | Minichromosome maintenance (MCM2/3/5) family protein | embryo defective 1688 | -0.64 | 0.31 | -0.32 | ||
70 | AT1G07770 | ribosomal protein S15A | ribosomal protein S15A | 0.64 | 0.33 | -0.34 | ||
71 | AT5G62600 | ARM repeat superfamily protein | modifier of snc1-1, 14 | 0.64 | 0.31 | -0.32 | ||
72 | AT1G14390 | Leucine-rich repeat protein kinase family protein | 0.64 | 0.34 | -0.3 | |||
73 | AT2G31040 | ATP synthase protein I -related | -0.64 | 0.34 | -0.32 | |||
74 | AT5G53480 | ARM repeat superfamily protein | 0.64 | 0.32 | -0.31 | |||
75 | AT3G59530 | Calcium-dependent phosphotriesterase superfamily protein | LESS ADHERENT POLLEN 3 | -0.64 | 0.31 | -0.34 | ||
76 | AT5G49210 | unknown protein; Has 3675 Blast hits to 2315 proteins in 312 species: Archae - 2; Bacteria - 342; Metazoa - 1190; Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes - 1742 (source: NCBI BLink). |
0.64 | 0.32 | -0.29 | |||
77 | AT1G75410 | BEL1-like homeodomain 3 | BEL1-like homeodomain 3 | -0.64 | 0.31 | -0.31 | ||
78 | AT2G05270 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.3 | -0.29 | |||
79 | AT5G53480 | ARM repeat superfamily protein | 0.64 | 0.3 | -0.31 | |||
80 | AT4G03750 | transposable element gene | 0.64 | 0.31 | -0.32 | |||
81 | AT5G62610 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.64 | 0.32 | -0.3 | |||
82 | AT2G40730 | Protein kinase family protein with ARM repeat domain | cytoplasmic tRNA export protein | 0.63 | 0.3 | -0.3 | ||
83 | AT1G56170 | nuclear factor Y, subunit C2 | ATHAP5B, HAP5B, nuclear factor Y, subunit C2 |
-0.63 | 0.29 | -0.32 | ||
84 | AT5G02240 | NAD(P)-binding Rossmann-fold superfamily protein | -0.63 | 0.3 | -0.3 | |||
85 | AT2G40410 | Staphylococcal nuclease homologue | -0.63 | 0.31 | -0.31 | |||
86 | AT2G35950 | embryo sac development arrest 12 | embryo sac development arrest 12 | -0.63 | 0.3 | -0.35 | ||
87 | AT4G07540 | transposable element gene | -0.63 | 0.3 | -0.32 | |||
88 | AT5G23630 | phosphate deficiency response 2 | MALE GAMETOGENESIS IMPAIRED ANTHERS, phosphate deficiency response 2, PI DEFICIENCY RESPONSE 2 |
0.63 | 0.3 | -0.33 | ||
89 | AT1G22985 | Integrase-type DNA-binding superfamily protein | cytokinin response factor 7 | -0.63 | 0.31 | -0.32 | ||
90 | AT2G24920 | transposable element gene | -0.62 | 0.32 | -0.34 | |||
91 | AT4G15570 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
MAGATAMA 3 | 0.62 | 0.34 | -0.34 | ||
92 | AT3G23400 | Plastid-lipid associated protein PAP / fibrillin family protein |
fibrillin 4 | -0.62 | 0.31 | -0.31 | ||
93 | AT2G40740 | WRKY DNA-binding protein 55 | WRKY DNA-BINDING PROTEIN 55, WRKY DNA-binding protein 55 |
0.62 | 0.31 | -0.31 | ||
94 | AT1G19970 | ER lumen protein retaining receptor family protein | -0.62 | 0.31 | -0.29 | |||
95 | AT1G80740 | chromomethylase 1 | chromomethylase 1, DNA METHYLTRANSFERASE 4 |
-0.62 | 0.32 | -0.31 | ||
96 | AT1G17040 | SH2 domain protein A | ARABIDOPSIS THALIANA SH2 DOMAIN PROTEIN A, SH2 domain protein A, STAT-TYPE LINKER-SH2 DOMAIN FACTOR A |
-0.62 | 0.33 | -0.32 | ||
97 | AT1G23640 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.33 | -0.31 | |||
98 | AT4G10030 | alpha/beta-Hydrolases superfamily protein | -0.62 | 0.31 | -0.31 | |||
99 | AT5G29090 | transposable element gene | -0.61 | 0.33 | -0.32 | |||
100 | AT5G65590 | Dof-type zinc finger DNA-binding family protein | -0.6 | 0.31 | -0.3 | |||
101 | AT5G05200 | Protein kinase superfamily protein | -0.6 | 0.32 | -0.31 | |||
102 | AT4G13150 | unknown protein; Has 83 Blast hits to 82 proteins in 37 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.6 | 0.34 | -0.32 | |||
103 | AT5G66670 | Protein of unknown function (DUF677) | -0.6 | 0.35 | -0.3 | |||
104 | AT1G02300 | Cysteine proteinases superfamily protein | -0.6 | 0.32 | -0.33 | |||
105 | AT2G10465 | transposable element gene | -0.59 | 0.31 | -0.3 | |||
106 | AT3G17230 | invertase/pectin methylesterase inhibitor family protein | -0.59 | 0.34 | -0.33 | |||
107 | AT3G13480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.33 | -0.31 | |||
108 | AT2G33530 | serine carboxypeptidase-like 46 | serine carboxypeptidase-like 46 | -0.59 | 0.33 | -0.31 | ||
109 | AT1G02190 | Fatty acid hydroxylase superfamily | -0.59 | 0.32 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
110 | C0176 | MST_2406.9 | - | - | - | -0.71 | 0.44 | -0.44 | ||
111 | C0169 | MST_2105.7 | - | - | - | -0.71 | 0.43 | -0.47 | ||
112 | C0180 | MST_2539.9 | - | - | - | -0.67 | 0.45 | -0.48 | ||
113 | C0195 | Phenylpyruvic acid | - | Phenylpyruvate | phenylalanine degradation III | -0.61 | 0.47 | -0.42 |