AGICode | AT1G26470 |
Description | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G26470 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
1 | 0.32 | -0.28 | |||
2 | AT2G45860 | unknown protein; Has 32 Blast hits to 32 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.77 | 0.3 | -0.31 | |||
3 | AT2G21290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.76 | 0.32 | -0.31 | |||
4 | AT1G27435 | unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.76 | 0.32 | -0.32 | |||
5 | AT3G03420 | Ku70-binding family protein | 0.76 | 0.31 | -0.33 | |||
6 | AT5G61220 | LYR family of Fe/S cluster biogenesis protein | 0.74 | 0.32 | -0.33 | |||
7 | AT4G37660 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
0.74 | 0.31 | -0.31 | |||
8 | AT4G29480 | Mitochondrial ATP synthase subunit G protein | 0.73 | 0.31 | -0.32 | |||
9 | AT2G23930 | probable small nuclear ribonucleoprotein G | probable small nuclear ribonucleoprotein G |
0.73 | 0.31 | -0.32 | ||
10 | AT3G01790 | Ribosomal protein L13 family protein | 0.73 | 0.33 | -0.31 | |||
11 | AT2G29530 | Tim10/DDP family zinc finger protein | TIM10 | 0.72 | 0.33 | -0.33 | ||
12 | AT1G16000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.32 | -0.31 | |||
13 | AT1G48170 | unknown protein; Has 78 Blast hits to 78 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.32 | -0.33 | |||
14 | AT2G44270 | repressor of lrx1 | repressor of lrx1 | 0.72 | 0.3 | -0.32 | ||
15 | AT1G79390 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.71 | 0.3 | -0.32 | |||
16 | AT3G56050 | Protein kinase family protein | -0.7 | 0.34 | -0.32 | |||
17 | AT4G29660 | embryo defective 2752 | EMBRYO DEFECTIVE 2752 | 0.7 | 0.29 | -0.32 | ||
18 | AT4G26110 | nucleosome assembly protein1;1 | ARABIDOPSIS THALIANA NUCLEOSOME ASSEMLY PROTEIN 1;1, nucleosome assembly protein1;1 |
0.7 | 0.32 | -0.3 | ||
19 | AT3G05070 | CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). |
0.69 | 0.33 | -0.32 | |||
20 | AT5G44030 | cellulose synthase A4 | cellulose synthase A4, IRREGULAR XYLEM 5, NWS2 |
-0.69 | 0.3 | -0.31 | ||
21 | AT2G34900 | Transcription factor GTE6 | GTE01, GLOBAL TRANSCRIPTION FACTOR GROUP E1, IMBIBITION-INDUCIBLE 1 |
0.69 | 0.32 | -0.31 | ||
22 | AT2G45240 | methionine aminopeptidase 1A | methionine aminopeptidase 1A | 0.69 | 0.33 | -0.34 | ||
23 | AT5G06210 | RNA binding (RRM/RBD/RNP motifs) family protein | 0.69 | 0.32 | -0.33 | |||
24 | AT5G18420 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.67 | 0.32 | -0.33 | |||
25 | AT2G42210 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
ATOEP16-3, OEP16-3 | 0.67 | 0.34 | -0.31 | ||
26 | AT5G44310 | Late embryogenesis abundant protein (LEA) family protein | -0.66 | 0.32 | -0.3 | |||
27 | AT1G17510 | unknown protein; Has 11 Blast hits to 11 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.3 | -0.31 | |||
28 | AT4G17510 | ubiquitin C-terminal hydrolase 3 | ubiquitin C-terminal hydrolase 3 | 0.65 | 0.33 | -0.32 | ||
29 | AT2G45640 | SIN3 associated polypeptide P18 | SIN3 ASSOCIATED POLYPEPTIDE 18, SIN3 associated polypeptide P18 |
0.65 | 0.33 | -0.31 | ||
30 | AT3G58180 | ARM repeat superfamily protein | 0.65 | 0.31 | -0.32 | |||
31 | AT5G19180 | E1 C-terminal related 1 | E1 C-terminal related 1 | 0.65 | 0.33 | -0.31 | ||
32 | AT3G11740 | Protein of unknown function (DUF567) | -0.62 | 0.32 | -0.32 | |||
33 | AT5G17420 | Cellulose synthase family protein | ATCESA7, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, IRREGULAR XYLEM 3, MURUS 10 |
-0.61 | 0.33 | -0.31 | ||
34 | AT3G23590 | REF4-related 1 | MED33A, REF4-related 1 | -0.61 | 0.32 | -0.32 | ||
35 | AT3G56590 | hydroxyproline-rich glycoprotein family protein | -0.61 | 0.31 | -0.3 | |||
36 | AT3G49880 | glycosyl hydrolase family protein 43 | -0.61 | 0.34 | -0.33 | |||
37 | AT1G15320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 62 Blast hits to 62 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.33 | |||
38 | AT3G58000 | VQ motif-containing protein | -0.6 | 0.3 | -0.32 | |||
39 | AT3G50690 | Leucine-rich repeat (LRR) family protein | -0.59 | 0.3 | -0.31 | |||
40 | AT1G22640 | myb domain protein 3 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, myb domain protein 3 |
-0.59 | 0.31 | -0.3 | ||
41 | AT5G04560 | HhH-GPD base excision DNA repair family protein | DEMETER | -0.58 | 0.31 | -0.31 | ||
42 | AT5G60720 | Protein of unknown function, DUF547 | -0.58 | 0.32 | -0.31 | |||
43 | AT1G04660 | glycine-rich protein | -0.58 | 0.31 | -0.3 | |||
44 | AT5G14540 | Protein of unknown function (DUF1421) | -0.57 | 0.31 | -0.32 | |||
45 | AT3G26730 | RING/U-box superfamily protein | -0.57 | 0.32 | -0.31 | |||
46 | AT5G54690 | galacturonosyltransferase 12 | galacturonosyltransferase 12, IRREGULAR XYLEM 8, LGT6 |
-0.57 | 0.31 | -0.31 | ||
47 | AT3G45680 | Major facilitator superfamily protein | -0.57 | 0.3 | -0.3 | |||
48 | AT5G39910 | Pectin lyase-like superfamily protein | -0.56 | 0.3 | -0.3 | |||
49 | AT3G49060 | U-box domain-containing protein kinase family protein | -0.56 | 0.3 | -0.31 | |||
50 | AT1G71980 | Protease-associated (PA) RING/U-box zinc finger family protein |
-0.56 | 0.31 | -0.3 | |||
51 | AT2G35110 | transcription activators | GNARLED, NCK-ASSOCIATED PROTEIN 1, NAPP |
-0.56 | 0.3 | -0.33 | ||
52 | AT3G02125 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink). |
-0.55 | 0.3 | -0.3 | |||
53 | AT1G47980 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.33 | -0.32 | |||
54 | AT2G28810 | Dof-type zinc finger DNA-binding family protein | -0.54 | 0.32 | -0.32 | |||
55 | AT3G01090 | SNF1 kinase homolog 10 | SNF1 kinase homolog 10, KIN10, SNF1 kinase homolog 10, SNF1-RELATED PROTEIN KINASE 1.1 |
-0.53 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
56 | C0137 | Leucine | L-Leucine | L-Leucine | indole-3-acetyl-amino acid biosynthesis, leucine biosynthesis, jasmonoyl-amino acid conjugates biosynthesis I, IAA biosynthesis II, tRNA charging, leucine degradation I |
-0.65 | 0.31 | -0.32 | ||
57 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
-0.55 | 0.33 | -0.31 |