AT1G17460 : TRF-like 3
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G17460
Description TRF-like 3
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G17460 TRF-like 3 TRF-like 3 1 0.3 -0.32
2 AT1G31630 AGAMOUS-like 86 AGAMOUS-like 86 -0.75 0.32 -0.32
3 AT5G41800 Transmembrane amino acid transporter family protein -0.73 0.32 -0.3
4 AT1G77470 replication factor C subunit 3 EMBRYO DEFECTIVE 2810, replication
factor C subunit 3, replication
factor C 5		 0.72 0.29 -0.3
5 AT3G02070 Cysteine proteinases superfamily protein -0.72 0.31 -0.31
6 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 -0.72 0.3 -0.33
7 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 -0.72 0.31 -0.33
8 AT2G41040 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.31 -0.31
9 AT1G73020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF590 (InterPro:IPR007632); Has 1198
Blast hits to 1128 proteins in 154 species: Archae - 0;
Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25;
Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).		 0.7 0.3 -0.33
10 AT3G29075 glycine-rich protein -0.7 0.32 -0.32
11 AT1G55540 Nuclear pore complex protein 0.7 0.3 -0.29
12 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.32 -0.31
13 AT5G43020 Leucine-rich repeat protein kinase family protein 0.7 0.31 -0.31
14 AT4G32710 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 14		 0.7 0.32 -0.31
15 AT1G25370 Protein of unknown function (DUF1639) -0.69 0.31 -0.32
16 AT3G55600 Membrane fusion protein Use1 -0.69 0.32 -0.32
17 AT1G06800 alpha/beta-Hydrolases superfamily protein phospholipase A I gamma 1 -0.69 0.31 -0.32
18 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 -0.69 0.31 -0.29
19 AT5G45130 RAB homolog 1 ARABIDOPSIS RAB HOMOLOG F2A,
ATRAB5A, ATRABF2A, RAB HOMOLOG
F2A, RAB5A, RABF2A, RAB homolog 1		 -0.69 0.32 -0.31
20 AT1G23730 beta carbonic anhydrase 3 BETA CARBONIC ANHYDRASE 3, beta
carbonic anhydrase 3		 -0.68 0.31 -0.3
21 AT3G16870 GATA transcription factor 17 GATA transcription factor 17 0.68 0.35 -0.32
22 AT5G61530 small G protein family protein / RhoGAP family protein -0.68 0.31 -0.33
23 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 0.68 0.31 -0.33
24 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.3 -0.3
25 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 -0.68 0.3 -0.32
26 AT1G73380 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1308 (InterPro:IPR010733); Has 162
Blast hits to 160 proteins in 67 species: Archae - 0;
Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 -0.67 0.33 -0.34
27 AT5G22950 SNF7 family protein VPS24.1 -0.67 0.32 -0.3
28 AT2G47520 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana ethylene
response factor 71, ethylene
response factor 71, HYPOXIA
RESPONSIVE ERF (ETHYLENE RESPONSE
FACTOR) 2		 -0.67 0.31 -0.34
29 AT5G15570 Bromodomain transcription factor 0.67 0.3 -0.31
30 AT2G31320 poly(ADP-ribose) polymerase 2 ATPARP2, poly(ADP-ribose)
polymerase 2		 0.67 0.32 -0.32
31 AT3G22780 Tesmin/TSO1-like CXC domain-containing protein ATTSO1, CHINESE FOR 'UGLY' 0.67 0.34 -0.32
32 AT1G80870 Protein kinase superfamily protein 0.67 0.31 -0.31
33 AT1G66090 Disease resistance protein (TIR-NBS class) -0.66 0.3 -0.3
34 AT3G47340 glutamine-dependent asparagine synthase 1 glutamine-dependent asparagine
synthase 1, ARABIDOPSIS THALIANA
GLUTAMINE-DEPENDENT ASPARAGINE
SYNTHASE 1, DARK INDUCIBLE 6		 -0.66 0.31 -0.31
35 AT5G48360 Actin-binding FH2 (formin homology 2) family protein 0.66 0.31 -0.3
36 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.29 -0.31
37 AT4G18080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: stem; BEST Arabidopsis
thaliana protein match is: Protein of unknown function
(DUF1184) (TAIR:AT3G27900.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.33 -0.33
38 AT3G50900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits
to 45 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.32
39 AT4G15890 binding 0.66 0.32 -0.33
40 AT3G24320 MUTL protein homolog 1 ATMSH1, CHLOROPLAST MUTATOR, CHM1,
MUTL protein homolog 1		 0.66 0.34 -0.31
41 AT5G55340 MBOAT (membrane bound O-acyl transferase) family protein 0.66 0.32 -0.32
42 AT1G06740 transposable element gene 0.66 0.32 -0.3
43 AT1G31230 aspartate kinase-homoserine dehydrogenase i ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase i		 0.65 0.3 -0.32
44 AT1G70130 Concanavalin A-like lectin protein kinase family protein -0.65 0.31 -0.33
45 AT5G22690 Disease resistance protein (TIR-NBS-LRR class) family -0.65 0.32 -0.31
46 AT1G79220 Mitochondrial transcription termination factor family
protein		 0.65 0.31 -0.3
47 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.33
48 AT2G12190 Cytochrome P450 superfamily protein -0.65 0.28 -0.31
49 AT3G04970 DHHC-type zinc finger family protein -0.64 0.33 -0.32
50 AT1G35330 RING/U-box superfamily protein -0.64 0.31 -0.32
51 AT1G54150 E3 Ubiquitin ligase family protein -0.64 0.3 -0.31
52 AT5G34930 arogenate dehydrogenase -0.64 0.32 -0.31
53 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 0.64 0.32 -0.31
54 AT3G50590 Transducin/WD40 repeat-like superfamily protein -0.64 0.33 -0.31
55 AT5G41350 RING/U-box superfamily protein -0.63 0.29 -0.34
56 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein -0.63 0.33 -0.35
57 AT5G24360 inositol requiring 1-1 ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-1, AtIRE1b, inositol
requiring 1-1		 -0.63 0.3 -0.31
58 AT4G24790 AAA-type ATPase family protein 0.63 0.31 -0.33
59 AT2G25710 holocarboxylase synthase 1 holocarboxylase synthase 1 0.63 0.33 -0.33
60 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.33 -0.31
61 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.63 0.32 -0.32
62 AT1G59710 Protein of unknown function (DUF569) -0.63 0.32 -0.32
63 AT4G13010 Oxidoreductase, zinc-binding dehydrogenase family protein -0.63 0.31 -0.34
64 AT1G27880 DEAD/DEAH box RNA helicase family protein 0.63 0.3 -0.32
65 AT3G09010 Protein kinase superfamily protein -0.63 0.31 -0.3
66 AT1G79880 RNA recognition motif (RRM)-containing protein 0.62 0.32 -0.33
67 AT2G23970 Class I glutamine amidotransferase-like superfamily protein -0.62 0.31 -0.3
68 AT2G15130 Plant basic secretory protein (BSP) family protein 0.62 0.3 -0.35
69 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.62 0.31 -0.31
70 AT2G06230 transposable element gene 0.61 0.33 -0.31
71 AT4G29910 origin recognition complex protein 5 ATORC5, EMBRYO DEFECTIVE 2798,
origin recognition complex protein
5		 0.61 0.3 -0.32