AT1G62920 : -
Query Information
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AGICode AT1G62920
Description CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.32 -0.31
2 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 0.73 0.3 -0.32
3 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein 0.72 0.3 -0.32
4 AT3G11620 alpha/beta-Hydrolases superfamily protein 0.71 0.32 -0.32
5 AT5G16180 ortholog of maize chloroplast splicing factor CRS1 ARABIDOPSIS ORTHOLOG OF MAIZE
CHLOROPLAST SPLICING FACTOR CRS1,
ortholog of maize chloroplast
splicing factor CRS1		 0.7 0.32 -0.32
6 AT4G26700 fimbrin 1 ARABIDOPSIS THALIANA FIMBRIN 1,
fimbrin 1		 0.7 0.32 -0.32
7 AT1G53090 SPA1-related 4 SPA1-related 4 0.69 0.33 -0.31
8 AT2G41580 transposable element gene -0.68 0.31 -0.31
9 AT2G17640 Trimeric LpxA-like enzymes superfamily protein ATSERAT3;1, SERINE
ACETYLTRANSFERASE 106		 0.68 0.3 -0.31
10 AT5G38770 glutamine dumper 7 glutamine dumper 7, glutamine
dumper 7		 0.68 0.32 -0.31
11 AT2G38780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.67 0.3 -0.33
12 AT5G23680 Sterile alpha motif (SAM) domain-containing protein 0.66 0.32 -0.32
13 AT3G16690 Nodulin MtN3 family protein AtSWEET16, SWEET16 -0.66 0.32 -0.29
14 AT4G39390 nucleotide sugar transporter-KT 1 A. THALIANA NUCLEOTIDE SUGAR
TRANSPORTER-KT 1, nucleotide sugar
transporter-KT 1		 -0.66 0.32 -0.32
15 AT4G15750 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.66 0.31 -0.32
16 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.66 0.29 -0.33
17 AT1G19485 Transducin/WD40 repeat-like superfamily protein 0.66 0.31 -0.32
18 AT5G38140 nuclear factor Y, subunit C12 nuclear factor Y, subunit C12 0.66 0.3 -0.32
19 AT1G70620 cyclin-related 0.66 0.33 -0.29
20 AT3G04780 Protein of unknown function (DUF1000) -0.65 0.31 -0.32
21 AT2G17975 zinc finger (Ran-binding) family protein 0.65 0.31 -0.34
22 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.65 0.33 -0.31
23 AT5G64710 Putative endonuclease or glycosyl hydrolase -0.65 0.32 -0.32
24 AT5G07500 Zinc finger C-x8-C-x5-C-x3-H type family protein PEI1 0.65 0.33 -0.32
25 AT2G19550 alpha/beta-Hydrolases superfamily protein 0.65 0.3 -0.33
26 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 0.65 0.33 -0.31
27 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 -0.65 0.29 -0.3
28 AT1G74840 Homeodomain-like superfamily protein -0.65 0.3 -0.32
29 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 -0.64 0.31 -0.32
30 AT3G03300 dicer-like 2 DICER-LIKE 2, dicer-like 2 0.64 0.31 -0.31
31 AT2G06310 transposable element gene 0.64 0.3 -0.31
32 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.64 0.29 -0.3
33 AT4G33180 alpha/beta-Hydrolases superfamily protein 0.64 0.33 -0.31
34 AT3G03290 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.64 0.33 -0.32
35 AT1G68200 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.64 0.31 -0.3
36 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.63 0.32 -0.32
37 AT3G04280 response regulator 22 response regulator 22, response
regulator 22		 -0.63 0.33 -0.32
38 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.63 0.29 -0.32
39 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.29
40 AT1G11990 O-fucosyltransferase family protein 0.63 0.32 -0.32
41 AT2G10900 transposable element gene 0.63 0.33 -0.32
42 AT3G05650 receptor like protein 32 receptor like protein 32, receptor
like protein 32		 0.62 0.32 -0.3
43 AT4G31740 Sec1/munc18-like (SM) proteins superfamily 0.62 0.33 -0.31
44 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.62 0.32 -0.31
45 ATMG00470 hypothetical protein ORF122A 0.62 0.32 -0.34
46 AT3G51760 Protein of unknown function (DUF688) -0.62 0.3 -0.32
47 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.62 0.31 -0.3
48 AT3G13050 Major facilitator superfamily protein AtNiaP, nicotinate transporter -0.62 0.33 -0.33
49 AT2G11120 transposable element gene 0.62 0.32 -0.31
50 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.62 0.3 -0.29
51 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.61 0.31 -0.33
52 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.61 0.33 -0.29
53 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.61 0.33 -0.33
54 AT1G23880 NHL domain-containing protein 0.61 0.31 -0.32
55 AT3G11850 Protein of unknown function, DUF593 -0.61 0.32 -0.33
56 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.61 0.29 -0.31
57 AT1G14660 Na+/H+ exchanger 8 Na+/H+ exchanger 8, Na+/H+
exchanger 8, SODIUM HYDROGEN
EXCHANGER 8		 0.61 0.3 -0.27
58 AT1G22860 Vacuolar sorting protein 39 0.61 0.32 -0.31
59 AT1G20270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.34 -0.3
60 AT3G45420 Concanavalin A-like lectin protein kinase family protein 0.61 0.31 -0.31
61 AT3G27440 uridine kinase-like 5 uridine kinase-like 5 -0.61 0.31 -0.31
62 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.61 0.32 -0.31
63 AT5G24970 Protein kinase superfamily protein 0.61 0.31 -0.32
64 AT4G32220 transposable element gene -0.61 0.33 -0.3
65 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.34
66 AT1G05530 UDP-glucosyl transferase 75B2 UDP-GLUCOSYL TRANSFERASE 2,
UDP-glucosyl transferase 75B2		 -0.6 0.3 -0.31
67 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.6 0.32 -0.3
68 AT1G31370 Ubiquitin-specific protease family C19-related protein 0.6 0.35 -0.32
69 AT5G59040 copper transporter 3 copper transporter 3 0.6 0.32 -0.32
70 AT4G32890 GATA transcription factor 9 GATA transcription factor 9 -0.6 0.3 -0.32
71 AT5G03450 Transducin/WD40 repeat-like superfamily protein 0.6 0.32 -0.31
72 AT1G26960 homeobox protein 23 homeobox protein 23, homeobox
protein 23		 -0.6 0.27 -0.31
73 AT3G56550 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.32 -0.31
74 AT5G06540 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.31 -0.32
75 AT1G71697 choline kinase 1 choline kinase 1, CHOLINE KINASE,
choline kinase 1		 -0.6 0.33 -0.32
76 AT4G29740 cytokinin oxidase 4 ATCKX4, cytokinin oxidase 4 -0.59 0.32 -0.33
77 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 0.59 0.31 -0.31
78 AT3G28030 5'-3' exonuclease family protein ULTRAVIOLET HYPERSENSITIVE 3, UV
REPAIR DEFECTIVE 1		 0.59 0.3 -0.31
79 AT1G48870 Transducin/WD40 repeat-like superfamily protein 0.59 0.32 -0.32
80 AT3G50130 Plant protein of unknown function (DUF247) -0.59 0.32 -0.3
81 AT4G10780 LRR and NB-ARC domains-containing disease resistance
protein		 -0.59 0.31 -0.29
82 AT3G14940 phosphoenolpyruvate carboxylase 3 phosphoenolpyruvate carboxylase 3,
phosphoenolpyruvate carboxylase 3		 -0.59 0.3 -0.31
83 AT2G27990 BEL1-like homeodomain 8 BEL1-like homeodomain 8,
POUND-FOOLISH		 0.59 0.32 -0.31
84 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.3 -0.32
85 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 -0.59 0.3 -0.28
86 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 0.59 0.34 -0.31
87 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.58 0.29 -0.3
88 AT4G35380 SEC7-like guanine nucleotide exchange family protein -0.58 0.3 -0.29
89 AT4G00460 RHO guanyl-nucleotide exchange factor 3 ATROPGEF3, RHO guanyl-nucleotide
exchange factor 3		 -0.58 0.29 -0.33
90 AT4G37400 cytochrome P450, family 81, subfamily F, polypeptide 3 cytochrome P450, family 81,
subfamily F, polypeptide 3		 -0.58 0.33 -0.32
91 AT4G02810 Protein of unknown function (DUF3049) FANTASTIC FOUR 1 -0.58 0.33 -0.3
92 AT3G19610 Plant protein of unknown function (DUF936) -0.58 0.3 -0.31
93 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.57 0.3 -0.32
94 AT1G73150 global transcription factor group E3 global transcription factor group
E3		 -0.57 0.34 -0.32
95 AT2G13020 transposable element gene -0.57 0.31 -0.31
96 AT1G64930 cytochrome P450, family 87, subfamily A, polypeptide 7 cytochrome P450, family 87,
subfamily A, polypeptide 7		 -0.57 0.31 -0.32
97 AT2G14380 transposable element gene -0.56 0.3 -0.32
98 AT2G03410 Mo25 family protein -0.56 0.3 -0.33
99 AT3G50870 GATA type zinc finger transcription factor family protein GATA TRANSCRIPTION FACTOR 18,
HANABA TANARU, MONOPOLE		 -0.55 0.33 -0.31
100 AT1G70040 Protein of unknown function (DUF1163) -0.55 0.3 -0.31
101 AT1G09270 importin alpha isoform 4 importin alpha isoform 4 -0.55 0.34 -0.35
102 AT5G13990 exocyst subunit exo70 family protein C2 exocyst subunit exo70 family
protein C2, exocyst subunit exo70
family protein C2		 -0.55 0.3 -0.31
103 AT1G35030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34910.1); Has 7 Blast
hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.33 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
104 C0238 Sitosterol 3-O-β-D-glucoside - 3-O-β-D-Glucosyl-β-sitosterol sphingolipid biosynthesis -0.6 0.35 -0.33 C0238
105 C0205 Phosphatidylglycerol-34:3 - Phosphatidylglycerol-34:3 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.6 0.35 -0.34
106 C0077 Digalactosyldiacylglycerol-34:2 - Digalactosyldiacylglycerol-34:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.58 0.32 -0.34
107 C0078 Digalactosyldiacylglycerol-34:3 - Digalactosyldiacylglycerol-34:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.58 0.35 -0.32
108 C0203 Phosphatidylglycerol-34:1 - Phosphatidylglycerol-34:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.58 0.33 -0.32
109 C0200 Phosphatidylglycerol-32:0 - Phosphatidylglycerol-32:0 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.58 0.32 -0.34
110 C0076 Digalactosyldiacylglycerol-34:1 - Digalactosyldiacylglycerol-34:1 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.57 0.34 -0.35
111 C0152 Monogalactosyldiacylgycerol-34:5 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.55 0.33 -0.32
112 C0202 Phosphatidylglycerol-34:0 - Phosphatidylglycerol-34:0 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.55 0.33 -0.32
113 C0246 Sulfoquinovosyldiacylglycerol-34:2 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.55 0.35 -0.33 C0246