AGICode | AT1G63030 |
Description | Integrase-type DNA-binding superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G63030 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 2 | 1 | 0.32 | -0.34 | ||
2 | AT4G04420 | transposable element gene | -0.74 | 0.34 | -0.32 | |||
3 | AT1G50340 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.7 | 0.32 | -0.31 | |||
4 | AT5G17510 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.68 | 0.28 | -0.34 | |||
5 | AT4G17610 | tRNA/rRNA methyltransferase (SpoU) family protein | -0.67 | 0.3 | -0.3 | |||
6 | AT5G37490 | ARM repeat superfamily protein | 0.66 | 0.34 | -0.3 | |||
7 | AT4G23110 | insulin-like growth factor binding | -0.65 | 0.31 | -0.33 | |||
8 | AT1G31260 | zinc transporter 10 precursor | zinc transporter 10 precursor | 0.64 | 0.31 | -0.32 | ||
9 | AT4G27010 | CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
EMBRYO DEFECTIVE 2788 | -0.64 | 0.33 | -0.3 | ||
10 | AT4G05500 | pseudogene, F-box protein family, AtFBL9/AtFBL23, contains similarity to N7 protein GI:3273101 from (Medicago truncatula); blastp match of 39% identity and 1.6e-34 P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein {Medicago truncatula} |
-0.64 | 0.31 | -0.34 | |||
11 | AT5G19480 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.64 | 0.32 | -0.33 | |||
12 | AT1G58190 | receptor like protein 9 | receptor like protein 9, receptor like protein 9 |
-0.63 | 0.31 | -0.31 | ||
13 | AT2G19640 | ASH1-related protein 2 | ASH1-related 2, SET DOMAIN PROTEIN 39 |
-0.63 | 0.32 | -0.34 | ||
14 | AT4G30190 | H(+)-ATPase 2 | H(+)-ATPase 2, H(+)-ATPase 2, PLASMA MEMBRANE PROTON ATPASE 2 |
-0.63 | 0.31 | -0.3 | ||
15 | AT1G77820 | transposable element gene | -0.62 | 0.32 | -0.31 | |||
16 | AT2G15500 | RNA-binding protein | 0.62 | 0.31 | -0.32 | |||
17 | AT5G65900 | DEA(D/H)-box RNA helicase family protein | -0.62 | 0.33 | -0.32 | |||
18 | AT1G52360 | Coatomer, beta' subunit | -0.62 | 0.31 | -0.31 | |||
19 | AT2G17660 | RPM1-interacting protein 4 (RIN4) family protein | 0.62 | 0.3 | -0.33 | |||
20 | AT3G42850 | Mevalonate/galactokinase family protein | -0.61 | 0.29 | -0.31 | |||
21 | AT3G20730 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.61 | 0.3 | -0.33 | |||
22 | AT1G18750 | AGAMOUS-like 65 | AGAMOUS-like 65 | 0.61 | 0.32 | -0.3 | ||
23 | AT2G23660 | LOB domain-containing protein 10 | LOB domain-containing protein 10 | -0.6 | 0.31 | -0.32 | ||
24 | AT1G51270 | structural molecules;transmembrane receptors;structural molecules |
-0.6 | 0.29 | -0.31 | |||
25 | AT2G05170 | vacuolar protein sorting 11 | vacuolar protein sorting 11, vacuolar protein sorting 11 |
-0.6 | 0.29 | -0.32 | ||
26 | AT5G39380 | Plant calmodulin-binding protein-related | -0.6 | 0.3 | -0.32 | |||
27 | AT3G51200 | SAUR-like auxin-responsive protein family | -0.6 | 0.32 | -0.31 | |||
28 | AT5G57740 | XB3 ortholog 2 in Arabidopsis thaliana | XB3 ortholog 2 in Arabidopsis thaliana |
-0.6 | 0.33 | -0.3 | ||
29 | AT1G76180 | Dehydrin family protein | EARLY RESPONSE TO DEHYDRATION 14 | 0.59 | 0.32 | -0.31 | ||
30 | AT1G53940 | GDSL-motif lipase 2 | GDSL-motif lipase 2 | -0.59 | 0.32 | -0.3 | ||
31 | AT1G10980 | Lung seven transmembrane receptor family protein | -0.59 | 0.32 | -0.31 | |||
32 | AT5G06200 | Uncharacterised protein family (UPF0497) | Casparian strip membrane domain protein 4 |
-0.59 | 0.32 | -0.3 | ||
33 | AT1G13810 | Restriction endonuclease, type II-like superfamily protein | -0.59 | 0.33 | -0.33 | |||
34 | AT1G41870 | transposable element gene | -0.59 | 0.32 | -0.33 | |||
35 | AT2G20510 | translocase inner membrane subunit 44-1 | translocase inner membrane subunit 44-1, translocase inner membrane subunit 44-1 |
-0.59 | 0.31 | -0.34 | ||
36 | AT4G21140 | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.59 | 0.31 | -0.32 | |||
37 | AT4G20080 | Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein |
0.59 | 0.33 | -0.33 | |||
38 | AT4G00280 | BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase protein (TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.32 | -0.32 | |||
39 | AT2G38830 | Ubiquitin-conjugating enzyme/RWD-like protein | 0.59 | 0.32 | -0.33 | |||
40 | AT4G00940 | Dof-type zinc finger DNA-binding family protein | 0.58 | 0.35 | -0.32 | |||
41 | AT4G33330 | plant glycogenin-like starch initiation protein 3 | glucuronic acid substitution of xylan 2, plant glycogenin-like starch initiation protein 3 |
0.58 | 0.32 | -0.32 | ||
42 | AT5G38820 | Transmembrane amino acid transporter family protein | -0.58 | 0.33 | -0.31 | |||
43 | AT3G42090 | transposable element gene | -0.57 | 0.32 | -0.31 | |||
44 | AT2G37890 | Mitochondrial substrate carrier family protein | -0.57 | 0.29 | -0.29 | |||
45 | AT5G62990 | Ubiquitin carboxyl-terminal hydrolase family protein | embryo defective 1692 | -0.57 | 0.32 | -0.34 | ||
46 | AT1G55640 | prenylated RAB acceptor 1.G1 | prenylated RAB acceptor 1.G1 | -0.57 | 0.3 | -0.33 | ||
47 | AT2G40316 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
48 | AT1G52470 | alpha/beta-Hydrolases superfamily protein | 0.57 | 0.31 | -0.32 | |||
49 | AT4G24950 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.31 | -0.31 | |||
50 | AT1G33910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.57 | 0.31 | -0.32 | |||
51 | AT4G11720 | hapless 2 | GENERATIVE CELL-SPECIFIC 1, HAPLESS 2 |
0.57 | 0.29 | -0.31 | ||
52 | AT3G04600 | Nucleotidylyl transferase superfamily protein | -0.57 | 0.3 | -0.32 | |||
53 | AT3G29660 | transposable element gene | 0.57 | 0.32 | -0.33 | |||
54 | AT2G32510 | mitogen-activated protein kinase kinase kinase 17 | mitogen-activated protein kinase kinase kinase 17 |
0.57 | 0.3 | -0.31 | ||
55 | AT5G02840 | LHY/CCA1-like 1 | LHY/CCA1-like 1 | 0.56 | 0.31 | -0.32 | ||
56 | AT4G20000 | VQ motif-containing protein | -0.56 | 0.32 | -0.33 | |||
57 | AT1G67460 | Minichromosome maintenance (MCM2/3/5) family protein | 0.56 | 0.3 | -0.33 | |||
58 | AT4G11170 | Disease resistance protein (TIR-NBS-LRR class) family | -0.56 | 0.33 | -0.3 | |||
59 | AT1G66550 | WRKY DNA-binding protein 67 | ATWRKY67, WRKY DNA-binding protein 67 |
-0.56 | 0.3 | -0.35 | ||
60 | AT3G14950 | tetratricopetide-repeat thioredoxin-like 2 | tetratricopetide-repeat thioredoxin-like 2 |
0.55 | 0.33 | -0.35 | ||
61 | AT4G07740 | Protein of unknown function (DUF3287) | 0.54 | 0.3 | -0.32 | |||
62 | AT2G28520 | vacuolar proton ATPase A1 | vacuolar proton ATPase A1 | -0.54 | 0.31 | -0.29 | ||
63 | AT5G58650 | plant peptide containing sulfated tyrosine 1 | plant peptide containing sulfated tyrosine 1 |
0.54 | 0.3 | -0.3 | ||
64 | AT5G12080 | mechanosensitive channel of small conductance-like 10 | ATMSL10, mechanosensitive channel of small conductance-like 10 |
-0.54 | 0.33 | -0.32 | ||
65 | AT3G51360 | Eukaryotic aspartyl protease family protein | -0.54 | 0.3 | -0.31 | |||
66 | AT3G17590 | transcription regulatory protein SNF5, putative (BSH) | BUSHY GROWTH, CHE1 | 0.54 | 0.31 | -0.32 | ||
67 | AT2G01150 | RING-H2 finger protein 2B | RING-H2 finger protein 2B | 0.54 | 0.32 | -0.31 | ||
68 | AT2G45320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 45 Blast hits to 45 proteins in 16 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.33 | -0.31 | |||
69 | AT2G07728 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.3 | -0.29 | |||
70 | AT1G63350 | Disease resistance protein (CC-NBS-LRR class) family | 0.53 | 0.32 | -0.32 | |||
71 | AT3G22700 | F-box and associated interaction domains-containing protein | 0.53 | 0.33 | -0.31 | |||
72 | AT4G33020 | ZIP metal ion transporter family | ATZIP9, ZIP9 | 0.53 | 0.32 | -0.3 | ||
73 | AT2G16520 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G45560.1); Has 72 Blast hits to 69 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.3 | -0.3 | |||
74 | AT1G62970 | Chaperone DnaJ-domain superfamily protein | 0.53 | 0.33 | -0.32 | |||
75 | AT3G05460 | sporozoite surface protein-related | 0.52 | 0.31 | -0.32 | |||
76 | AT3G29610 | transposable element gene | 0.52 | 0.33 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
77 | C0119 | Indole-3-ylmethyl-glucosinolate | - | indol-3-ylmethyl glucosinolate | indole glucosinolate breakdown (active in intact plant cell), indole glucosinolate breakdown (insect chewing induced), glucosinolate biosynthesis from tryptophan |
0.64 | 0.47 | -0.46 | ||
78 | C0197 | Phosphatidylcholine-36:1 | - | Phosphatidylcholine-36:1 | choline biosynthesis III, diacylglycerol biosynthesis, phospholipases, triacylglycerol biosynthesis, linoleate biosynthesis I, phosphatidylcholine biosynthesis III, glutathione redox reactions I |
0.57 | 0.51 | -0.54 |