AT1G63000 : nucleotide-rhamnose synthase/epimerase-reductase.....
Query Information
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AGICode AT1G63000
Description nucleotide-rhamnose synthase/epimerase-reductase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G63000 nucleotide-rhamnose synthase/epimerase-reductase nucleotide-rhamnose
synthase/epimerase-reductase,
UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E
PIMERASE-4-REDUCTASE 1		 1 0.31 -0.32
2 AT1G30630 Coatomer epsilon subunit 0.85 0.32 -0.32
3 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 0.81 0.32 -0.32
4 AT2G18440 GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15); other RNA GENE WITH UNSTABLE TRANSCRIPT 15 -0.79 0.29 -0.33
5 AT1G70350 unknown protein; Has 98 Blast hits to 98 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.33 -0.34
6 AT2G19900 NADP-malic enzyme 1 Arabidopsis thaliana NADP-malic
enzyme 1, NADP-malic enzyme 1		 -0.79 0.35 -0.31
7 AT3G54960 PDI-like 1-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 1, PDI-like
1-3, PROTEIN DISULFIDE ISOMERASE
1, PDI-like 1-3		 0.78 0.31 -0.32
8 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B		 0.78 0.31 -0.34
9 AT2G28490 RmlC-like cupins superfamily protein -0.78 0.31 -0.33
10 AT1G03870 FASCICLIN-like arabinoogalactan 9 FASCICLIN-like arabinoogalactan 9 0.78 0.31 -0.32
11 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 0.78 0.32 -0.33
12 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 0.78 0.33 -0.33
13 AT5G07110 prenylated RAB acceptor 1.B6 prenylated RAB acceptor 1.B6 0.77 0.3 -0.3
14 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.77 0.31 -0.32
15 AT4G31340 myosin heavy chain-related 0.77 0.3 -0.31
16 AT1G29310 SecY protein transport family protein 0.77 0.3 -0.3
17 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b 0.76 0.32 -0.32
18 AT3G51160 NAD(P)-binding Rossmann-fold superfamily protein GDP-D-MANNOSE-4,6-DEHYDRATASE 2,
MURUS 1, MURUS 1		 0.76 0.33 -0.32
19 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.76 0.3 -0.31
20 AT2G21820 unknown protein; Has 45 Blast hits to 45 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.76 0.31 -0.33
21 AT3G18940 clast3-related 0.75 0.3 -0.32
22 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR 0.75 0.31 -0.31
23 AT1G22530 PATELLIN 2 PATELLIN 2 0.75 0.32 -0.32
24 AT3G18760 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.75 0.32 -0.31
25 AT2G19760 profilin 1 PROFILIN 1, profilin 1 0.75 0.3 -0.31
26 AT1G29150 non-ATPase subunit 9 non-ATPase subunit 9, REGULATORY
PARTICLE NON-ATPASE 6		 0.75 0.31 -0.33
27 AT5G65270 RAB GTPase homolog A4A RAB GTPase homolog A4A, RAB GTPase
homolog A4A		 0.75 0.31 -0.33
28 AT1G53850 20S proteasome alpha subunit E1 ARABIDOPSIS 20S PROTEASOME ALPHA
SUBUNIT E1, 20S proteasome alpha
subunit E1		 0.74 0.3 -0.29
29 AT1G63220 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.74 0.32 -0.32
30 AT5G46230 Protein of unknown function, DUF538 0.74 0.31 -0.32
31 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 -0.74 0.32 -0.3
32 AT5G47770 farnesyl diphosphate synthase 1 farnesyl diphosphate synthase 1 0.74 0.33 -0.32
33 AT4G24820 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 0.74 0.31 -0.3
34 AT2G32580 Protein of unknown function (DUF1068) 0.74 0.3 -0.29
35 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.73 0.32 -0.3
36 AT1G18580 galacturonosyltransferase 11 galacturonosyltransferase 11 0.73 0.29 -0.29
37 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 0.73 0.32 -0.32
38 AT4G25280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.32 -0.31
39 AT2G30050 transducin family protein / WD-40 repeat family protein 0.73 0.3 -0.33
40 AT2G31980 PHYTOCYSTATIN 2 PHYTOCYSTATIN 2, PHYTOCYSTATIN 2 -0.73 0.31 -0.3
41 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.73 0.31 -0.32
42 AT1G09270 importin alpha isoform 4 importin alpha isoform 4 0.73 0.32 -0.31
43 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.73 0.31 -0.33
44 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.73 0.32 -0.31
45 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein 0.73 0.3 -0.33
46 AT2G19680 Mitochondrial ATP synthase subunit G protein 0.72 0.3 -0.3
47 AT1G64910 UDP-Glycosyltransferase superfamily protein 0.72 0.33 -0.29
48 AT1G14830 DYNAMIN-like 1C DYNAMIN-like 1C, ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 5,
DYNAMIN-like 1C, DYNAMIN RELATED
PROTEIN 1C		 0.72 0.31 -0.31
49 AT2G18050 histone H1-3 histone H1-3 -0.72 0.34 -0.31
50 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 -0.72 0.31 -0.33
51 AT1G47640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2053, membrane
(InterPro:IPR019164); Has 204 Blast hits to 204 proteins in
84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi
- 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27
(source: NCBI BLink).		 0.72 0.33 -0.3
52 AT5G13710 sterol methyltransferase 1 CEPHALOPOD, sterol
methyltransferase 1		 0.72 0.32 -0.32
53 AT1G52910 Protein of unknown function (DUF1218) 0.72 0.32 -0.3
54 AT5G44110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette A21,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN, ATPOP1, POP1		 0.72 0.3 -0.33
55 AT3G62090 phytochrome interacting factor 3-like 2 PHYTOCHROME-INTERACTING FACTOR 6,
phytochrome interacting factor
3-like 2		 -0.72 0.29 -0.31
56 AT4G12730 FASCICLIN-like arabinogalactan 2 FASCICLIN-like arabinogalactan 2 0.72 0.32 -0.31
57 AT5G49990 Xanthine/uracil permease family protein -0.71 0.32 -0.32
58 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 0.71 0.31 -0.33
59 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.32 -0.31
60 AT5G17060 ADP-ribosylation factor B1B ADP-ribosylation factor B1B,
ADP-ribosylation factor B1B		 0.71 0.3 -0.33
61 AT5G09900 26S proteasome regulatory subunit, putative (RPN5) EMBRYO DEFECTIVE 2107, MARIPOSA,
REGULATORY PARTICLE NON-ATPASE
SUBUNIT 5A		 0.71 0.31 -0.31
62 AT1G22200 Endoplasmic reticulum vesicle transporter protein 0.71 0.34 -0.31
63 AT1G71940 SNARE associated Golgi protein family 0.71 0.32 -0.31
64 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 0.71 0.31 -0.33
65 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.7 0.32 -0.36
66 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 -0.7 0.32 -0.31
67 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.7 0.31 -0.32
68 AT1G29240 Protein of unknown function (DUF688) -0.7 0.32 -0.34
69 AT5G10430 arabinogalactan protein 4 arabinogalactan protein 4, ATAGP4 0.7 0.31 -0.31
70 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 0.7 0.32 -0.33
71 AT5G48340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.7 0.34 -0.32
72 AT5G40420 oleosin 2 OLEOSIN 2, oleosin 2 -0.7 0.32 -0.31
73 AT1G10210 mitogen-activated protein kinase 1 mitogen-activated protein kinase
1, mitogen-activated protein
kinase 1		 -0.7 0.33 -0.33
74 AT3G63210 Protein of unknown function (DUF581) MEDIATOR OF ABA-REGULATED DORMANCY
1		 -0.7 0.32 -0.32
75 AT4G30060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.7 0.32 -0.31
76 AT5G14790 ARM repeat superfamily protein 0.7 0.31 -0.31
77 AT5G52300 CAP160 protein LOW-TEMPERATURE-INDUCED 65,
RESPONSIVE TO DESSICATION 29B		 -0.7 0.31 -0.34
78 AT4G20780 calmodulin like 42 calmodulin like 42 0.69 0.3 -0.27
79 AT4G36750 Quinone reductase family protein 0.69 0.32 -0.3
80 AT2G47550 Plant invertase/pectin methylesterase inhibitor superfamily 0.69 0.29 -0.28
81 AT3G04780 Protein of unknown function (DUF1000) 0.69 0.33 -0.3
82 AT5G43010 regulatory particle triple-A ATPase 4A regulatory particle triple-A
ATPase 4A		 0.69 0.32 -0.3
83 AT5G39320 UDP-glucose 6-dehydrogenase family protein 0.69 0.29 -0.31
84 AT1G12530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits
to 53 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.33 -0.33
85 AT3G07000 Cysteine/Histidine-rich C1 domain family protein 0.69 0.32 -0.34
86 AT3G16110 PDI-like 1-6 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 4, PDI-like
1-6, PROTEIN DISULFIDE ISOMERASE
4, PDI-like 1-6		 0.69 0.32 -0.28
87 AT1G66140 zinc finger protein 4 zinc finger protein 4 -0.69 0.31 -0.32
88 AT4G24620 phosphoglucose isomerase 1 PGI, phosphoglucose isomerase 1 0.69 0.32 -0.31
89 AT5G60660 plasma membrane intrinsic protein 2;4 plasma membrane intrinsic protein
2;4, PIP2F		 0.68 0.3 -0.32
90 AT2G41110 calmodulin 2 ATCAL5, calmodulin 2 0.68 0.3 -0.32
91 AT5G51490 Plant invertase/pectin methylesterase inhibitor superfamily 0.68 0.3 -0.3
92 AT5G11640 Thioredoxin superfamily protein 0.68 0.34 -0.32
93 AT3G59920 RAB GDP dissociation inhibitor 2 RAB GDP dissociation inhibitor 2,
RAB GDP dissociation inhibitor 2		 0.68 0.3 -0.27
94 AT3G45710 Major facilitator superfamily protein 0.68 0.3 -0.31
95 AT4G26650 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.33 -0.29
96 AT5G05550 sequence-specific DNA binding transcription factors -0.68 0.33 -0.3
97 AT3G13190 Plant protein of unknown function (DUF827) -0.68 0.35 -0.34
98 AT3G12700 Eukaryotic aspartyl protease family protein 0.68 0.31 -0.31
99 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 -0.67 0.33 -0.31
100 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 -0.66 0.3 -0.32
101 AT1G72190 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 -0.66 0.31 -0.31
102 AT5G06530 ABC-2 type transporter family protein ATP-binding cassette G22,
Arabidopsis thaliana ATP-binding
cassette G22		 -0.66 0.31 -0.32
103 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.66 0.32 -0.35
104 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 -0.65 0.3 -0.33
105 AT5G22700 F-box/RNI-like/FBD-like domains-containing protein -0.65 0.32 -0.31
106 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 -0.65 0.31 -0.31
107 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 -0.65 0.31 -0.28
108 AT2G45620 Nucleotidyltransferase family protein -0.65 0.33 -0.31
109 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.65 0.33 -0.31
110 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 -0.65 0.31 -0.33
111 AT5G26570 catalytics;carbohydrate kinases;phosphoglucan, water
dikinases		 ATGWD3, OK1, PHOSPHOGLUCAN WATER
DIKINASE		 -0.65 0.33 -0.33
112 AT3G03240 alpha/beta-Hydrolases superfamily protein -0.65 0.32 -0.33
113 AT1G60160 Potassium transporter family protein -0.65 0.29 -0.32
114 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.64 0.33 -0.31
115 AT3G05030 sodium hydrogen exchanger 2 ATNHX2, sodium hydrogen exchanger
2		 -0.64 0.33 -0.3
116 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.64 0.31 -0.34
117 AT1G14660 Na+/H+ exchanger 8 Na+/H+ exchanger 8, Na+/H+
exchanger 8, SODIUM HYDROGEN
EXCHANGER 8		 -0.64 0.31 -0.3
118 AT4G12020 protein kinase family protein ATWRKY19, MITOGEN-ACTIVATED
PROTEIN KINASE KINASE KINASE 11,
MAPK/ERK KINASE KINASE 4, WRKY19		 -0.64 0.32 -0.33
119 AT2G25890 Oleosin family protein -0.64 0.34 -0.32
120 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 -0.63 0.32 -0.31
121 AT5G51750 subtilase 1.3 subtilase 1.3, subtilase 1.3 -0.63 0.31 -0.31
122 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.63 0.32 -0.32
123 AT4G04150 transposable element gene -0.63 0.33 -0.32
124 AT1G63430 Leucine-rich repeat protein kinase family protein -0.63 0.3 -0.31
125 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 -0.62 0.31 -0.31
126 AT5G53710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.62 0.33 -0.29
127 AT5G64280 dicarboxylate transporter 2.2 dicarboxylate transporter 2.2 -0.62 0.33 -0.31
128 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.62 0.32 -0.31
129 AT3G06340 DNAJ heat shock N-terminal domain-containing protein -0.62 0.31 -0.3
130 AT1G54870 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.3 -0.32
131 AT3G03620 MATE efflux family protein -0.61 0.3 -0.32
132 AT5G61050 histone deacetylase-related / HD-related -0.61 0.33 -0.28
133 AT2G15810 transposable element gene -0.61 0.35 -0.3
134 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 -0.61 0.34 -0.29
135 AT5G59430 telomeric repeat binding protein 1 TELOMERE REPEAT BINDING PROTEIN 1,
telomeric repeat binding protein 1		 -0.61 0.31 -0.32
136 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 -0.61 0.34 -0.31
137 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 -0.61 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
138 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis -0.78 0.44 -0.45 C0003
139 C0132 Kaempferol-3-O-rutinoside - - - -0.66 0.46 -0.43