AGICode | AT1G62860 |
Description | pseudogene of pentatricopeptide (PPR) repeat-containing protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
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pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G62860 | pseudogene of pentatricopeptide (PPR) repeat-containing protein |
1 | 0.3 | -0.3 |
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2 | AT1G64250 | transposable element gene | -0.63 | 0.32 | -0.33 |
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3 | AT4G37970 | cinnamyl alcohol dehydrogenase 6 | ATCAD6, cinnamyl alcohol dehydrogenase 6 |
-0.61 | 0.31 | -0.32 |
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4 | AT2G40030 | nuclear RNA polymerase D1B | ATNRPD1B, DEFECTIVE IN MERISTEM SILENCING 5, DRD3, nuclear RNA polymerase D1B, NRPE1 |
-0.6 | 0.34 | -0.33 |
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5 | AT1G26940 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.57 | 0.32 | -0.31 |
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6 | AT4G00310 | Putative membrane lipoprotein | EMBRYO SAC DEVELOPMENT ARREST 8, MATERNAL EFFECT EMBRYO ARREST 46 |
0.57 | 0.34 | -0.31 |
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7 | AT5G50320 | radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein |
Elongator protein 3, enhancer-of-asymmetric leaves-two 1, ELONGATA 3, Elongator protein 3, HISTONE ACETYLTRANSFERASE 8, HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 3 |
0.55 | 0.33 | -0.3 |
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8 | AT2G22200 | Integrase-type DNA-binding superfamily protein | -0.54 | 0.32 | -0.3 |
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9 | AT1G19410 | FBD / Leucine Rich Repeat domains containing protein | -0.54 | 0.33 | -0.29 |
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10 | AT4G32140 | EamA-like transporter family | 0.54 | 0.29 | -0.3 |
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11 | AT3G05610 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.52 | 0.33 | -0.29 |
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12 | AT1G42450 | transposable element gene | -0.52 | 0.32 | -0.31 |
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13 | AT1G13180 | Actin-like ATPase superfamily protein | ACTIN-RELATED PROTEIN 3, ARABIDOPSIS THALIANA ACTIN-RELATED PROTEIN 3, DISTORTED TRICHOMES 1 |
0.52 | 0.34 | -0.33 |
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14 | AT2G02340 | phloem protein 2-B8 | phloem protein 2-B8, phloem protein 2-B8 |
-0.51 | 0.32 | -0.31 |
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15 | AT1G13890 | soluble N-ethylmaleimide-sensitive factor adaptor protein 30 |
ATSNAP30, soluble N-ethylmaleimide-sensitive factor adaptor protein 30 |
0.49 | 0.29 | -0.33 |
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16 | AT3G22770 | F-box associated ubiquitination effector family protein | -0.49 | 0.32 | -0.33 |
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17 | AT5G26080 | proline-rich family protein | 0.49 | 0.31 | -0.31 |
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18 | AT3G24715 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
-0.48 | 0.32 | -0.32 |
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19 | AT2G15600 | transposable element gene | 0.48 | 0.29 | -0.34 |
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20 | AT2G25565 | BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 27 Blast hits to 27 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.48 | 0.32 | -0.32 |
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21 | AT4G33640 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.48 | 0.33 | -0.31 |
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22 | AT2G02750 | Pentatricopeptide repeat (PPR) superfamily protein | -0.48 | 0.32 | -0.28 |
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23 | AT5G54030 | Cysteine/Histidine-rich C1 domain family protein | -0.48 | 0.32 | -0.33 |
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24 | AT1G29770 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.48 | 0.31 | -0.32 |
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25 | AT1G18520 | tetraspanin11 | tetraspanin11 | -0.47 | 0.32 | -0.34 |
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26 | AT3G16040 | Translation machinery associated TMA7 | -0.47 | 0.33 | -0.32 |
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27 | AT2G34530 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34540.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.47 | 0.3 | -0.31 |
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28 | AT5G47340 | alpha/beta-Hydrolases superfamily protein | -0.47 | 0.32 | -0.31 |
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29 | AT1G20530 | Protein of unknown function (DUF630 and DUF632) | -0.47 | 0.31 | -0.31 |
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30 | AT5G44700 | Leucine-rich repeat transmembrane protein kinase | EMBRYO SAC DEVELOPMENT ARREST 23, GASSHO 2 |
-0.46 | 0.31 | -0.31 |
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31 | AT5G27800 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
-0.46 | 0.29 | -0.3 |
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32 | AT5G58080 | response regulator 18 | response regulator 18, response regulator 18 |
-0.46 | 0.31 | -0.3 |
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33 | AT5G46670 | Cysteine/Histidine-rich C1 domain family protein | -0.46 | 0.3 | -0.32 |
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34 | AT1G64800 | DNA binding;sequence-specific DNA binding transcription factors |
-0.46 | 0.31 | -0.31 |
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35 | AT2G45940 | Protein of unknown function (DUF295) | -0.46 | 0.32 | -0.32 |
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36 | AT2G35430 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.46 | 0.33 | -0.31 |
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37 | AT1G04390 | BTB/POZ domain-containing protein | 0.46 | 0.31 | -0.32 |
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38 | AT2G19050 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.45 | 0.32 | -0.33 |
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39 | AT3G46380 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.45 | 0.31 | -0.32 |
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40 | AT3G30396 | transposable element gene | -0.45 | 0.3 | -0.33 |
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41 | AT1G20760 | Calcium-binding EF hand family protein | 0.45 | 0.32 | -0.32 |
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42 | AT3G62480 | transposable element gene | 0.44 | 0.3 | -0.3 |
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43 | AT2G25540 | cellulose synthase 10 | cellulose synthase 10 | -0.44 | 0.33 | -0.31 |
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44 | AT1G51915 | cryptdin protein-related | -0.44 | 0.3 | -0.32 |
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45 | AT2G32890 | RALF-like 17 | RALF-like 17 | -0.44 | 0.33 | -0.31 |
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46 | AT1G07290 | golgi nucleotide sugar transporter 2 | golgi nucleotide sugar transporter 2 |
0.44 | 0.31 | -0.32 |
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47 | AT2G02520 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
-0.43 | 0.31 | -0.31 |
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48 | AT2G01960 | tetraspanin14 | tetraspanin14 | -0.43 | 0.31 | -0.3 |
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49 | AT2G11940 | transposable element gene | 0.43 | 0.31 | -0.33 |
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50 | AT5G07420 | Pectin lyase-like superfamily protein | -0.43 | 0.31 | -0.33 |
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CID | Metabolite name | Pathway Information | Correlation | link | ||||||
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Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
51 | C0108 | GMP | - | GMP | guanine and guanosine salvage II, guanosine nucleotides degradation I, guanosine nucleotides degradation II, guanine and guanosine salvage III, purine nucleotides de novo biosynthesis II, purine nucleotide metabolism (phosphotransfer and nucleotide modification) |
-0.63 | 0.46 | -0.44 |
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