AT1G62860 : -
Query Information
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AGICode AT1G62860
Description pseudogene of pentatricopeptide (PPR) repeat-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G62860 pseudogene of pentatricopeptide (PPR) repeat-containing
protein		 1 0.3 -0.3
2 AT1G64250 transposable element gene -0.63 0.32 -0.33
3 AT4G37970 cinnamyl alcohol dehydrogenase 6 ATCAD6, cinnamyl alcohol
dehydrogenase 6		 -0.61 0.31 -0.32
4 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 -0.6 0.34 -0.33
5 AT1G26940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.57 0.32 -0.31
6 AT4G00310 Putative membrane lipoprotein EMBRYO SAC DEVELOPMENT ARREST 8,
MATERNAL EFFECT EMBRYO ARREST 46		 0.57 0.34 -0.31
7 AT5G50320 radical SAM domain-containing protein / GCN5-related
N-acetyltransferase (GNAT) family protein		 Elongator protein 3,
enhancer-of-asymmetric leaves-two
1, ELONGATA 3, Elongator protein
3, HISTONE ACETYLTRANSFERASE 8,
HISTONE ACETYLTRANSFERASE OF THE
GNAT FAMILY 3		 0.55 0.33 -0.3
8 AT2G22200 Integrase-type DNA-binding superfamily protein -0.54 0.32 -0.3
9 AT1G19410 FBD / Leucine Rich Repeat domains containing protein -0.54 0.33 -0.29
10 AT4G32140 EamA-like transporter family 0.54 0.29 -0.3
11 AT3G05610 Plant invertase/pectin methylesterase inhibitor superfamily -0.52 0.33 -0.29
12 AT1G42450 transposable element gene -0.52 0.32 -0.31
13 AT1G13180 Actin-like ATPase superfamily protein ACTIN-RELATED PROTEIN 3,
ARABIDOPSIS THALIANA ACTIN-RELATED
PROTEIN 3, DISTORTED TRICHOMES 1		 0.52 0.34 -0.33
14 AT2G02340 phloem protein 2-B8 phloem protein 2-B8, phloem
protein 2-B8		 -0.51 0.32 -0.31
15 AT1G13890 soluble N-ethylmaleimide-sensitive factor adaptor protein
30		 ATSNAP30, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 30		 0.49 0.29 -0.33
16 AT3G22770 F-box associated ubiquitination effector family protein -0.49 0.32 -0.33
17 AT5G26080 proline-rich family protein 0.49 0.31 -0.31
18 AT3G24715 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.48 0.32 -0.32
19 AT2G15600 transposable element gene 0.48 0.29 -0.34
20 AT2G25565 BEST Arabidopsis thaliana protein match is: Zinc finger,
C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1);
Has 27 Blast hits to 27 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.48 0.32 -0.32
21 AT4G33640 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.48 0.33 -0.31
22 AT2G02750 Pentatricopeptide repeat (PPR) superfamily protein -0.48 0.32 -0.28
23 AT5G54030 Cysteine/Histidine-rich C1 domain family protein -0.48 0.32 -0.33
24 AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.48 0.31 -0.32
25 AT1G18520 tetraspanin11 tetraspanin11 -0.47 0.32 -0.34
26 AT3G16040 Translation machinery associated TMA7 -0.47 0.33 -0.32
27 AT2G34530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G34540.2); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.47 0.3 -0.31
28 AT5G47340 alpha/beta-Hydrolases superfamily protein -0.47 0.32 -0.31
29 AT1G20530 Protein of unknown function (DUF630 and DUF632) -0.47 0.31 -0.31
30 AT5G44700 Leucine-rich repeat transmembrane protein kinase EMBRYO SAC DEVELOPMENT ARREST 23,
GASSHO 2		 -0.46 0.31 -0.31
31 AT5G27800 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.46 0.29 -0.3
32 AT5G58080 response regulator 18 response regulator 18, response
regulator 18		 -0.46 0.31 -0.3
33 AT5G46670 Cysteine/Histidine-rich C1 domain family protein -0.46 0.3 -0.32
34 AT1G64800 DNA binding;sequence-specific DNA binding transcription
factors		 -0.46 0.31 -0.31
35 AT2G45940 Protein of unknown function (DUF295) -0.46 0.32 -0.32
36 AT2G35430 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.46 0.33 -0.31
37 AT1G04390 BTB/POZ domain-containing protein 0.46 0.31 -0.32
38 AT2G19050 GDSL-like Lipase/Acylhydrolase superfamily protein -0.45 0.32 -0.33
39 AT3G46380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.45 0.31 -0.32
40 AT3G30396 transposable element gene -0.45 0.3 -0.33
41 AT1G20760 Calcium-binding EF hand family protein 0.45 0.32 -0.32
42 AT3G62480 transposable element gene 0.44 0.3 -0.3
43 AT2G25540 cellulose synthase 10 cellulose synthase 10 -0.44 0.33 -0.31
44 AT1G51915 cryptdin protein-related -0.44 0.3 -0.32
45 AT2G32890 RALF-like 17 RALF-like 17 -0.44 0.33 -0.31
46 AT1G07290 golgi nucleotide sugar transporter 2 golgi nucleotide sugar transporter
2		 0.44 0.31 -0.32
47 AT2G02520 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 -0.43 0.31 -0.31
48 AT2G01960 tetraspanin14 tetraspanin14 -0.43 0.31 -0.3
49 AT2G11940 transposable element gene 0.43 0.31 -0.33
50 AT5G07420 Pectin lyase-like superfamily protein -0.43 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		-0.63 0.46 -0.44 C0108