AT1G04960 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G04960
Description Protein of unknown function (DUF1664)
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G04960 Protein of unknown function (DUF1664) 1 0.33 -0.32
2 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 0.82 0.29 -0.3
3 AT5G17650 glycine/proline-rich protein 0.81 0.3 -0.31
4 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 0.8 0.31 -0.31
5 AT3G10260 Reticulon family protein 0.8 0.31 -0.32
6 AT5G13810 Glutaredoxin family protein 0.8 0.32 -0.32
7 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 0.8 0.31 -0.31
8 AT3G10640 SNF7 family protein VPS60.1 0.79 0.3 -0.3
9 AT1G12810 proline-rich family protein 0.79 0.33 -0.3
10 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 0.79 0.31 -0.33
11 AT5G59890 actin depolymerizing factor 4 actin depolymerizing factor 4,
ATADF4		 0.79 0.31 -0.3
12 AT5G61530 small G protein family protein / RhoGAP family protein 0.78 0.3 -0.32
13 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.78 0.31 -0.32
14 AT3G18630 uracil dna glycosylase uracil dna glycosylase, uracil dna
glycosylase		 -0.78 0.3 -0.31
15 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3		 0.78 0.29 -0.31
16 AT5G45130 RAB homolog 1 ARABIDOPSIS RAB HOMOLOG F2A,
ATRAB5A, ATRABF2A, RAB HOMOLOG
F2A, RAB5A, RABF2A, RAB homolog 1		 0.78 0.32 -0.29
17 AT3G51990 Protein kinase superfamily protein 0.77 0.31 -0.3
18 AT3G62770 Transducin/WD40 repeat-like superfamily protein autophagy 18a, autophagy 18a 0.76 0.32 -0.31
19 AT4G10970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.32 -0.32
20 AT3G06100 NOD26-like intrinsic protein 7;1 NOD26-like intrinsic protein 7;1,
NOD26-LIKE MIP 6, NOD26-LIKE MIP 8		 0.75 0.33 -0.32
21 AT1G29060 Target SNARE coiled-coil domain protein 0.75 0.28 -0.3
22 AT5G66310 ATP binding microtubule motor family protein -0.74 0.33 -0.33
23 AT4G28085 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.73 0.31 -0.31
24 AT4G19450 Major facilitator superfamily protein 0.73 0.31 -0.33
25 AT1G61010 cleavage and polyadenylation specificity factor 73-I cleavage and polyadenylation
specificity factor 73-I		 -0.72 0.3 -0.32
26 AT5G27940 WPP domain protein 3 WPP domain protein 3 -0.72 0.31 -0.31
27 AT2G38710 AMMECR1 family 0.72 0.32 -0.33
28 AT5G17640 Protein of unknown function (DUF1005) 0.71 0.33 -0.29
29 AT5G11860 SCP1-like small phosphatase 5 SCP1-like small phosphatase 5 0.71 0.3 -0.29
30 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.3 -0.3
31 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 -0.71 0.32 -0.34
32 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.29 -0.32
33 AT5G10800 RNA recognition motif (RRM)-containing protein -0.71 0.32 -0.31
34 AT1G66900 alpha/beta-Hydrolases superfamily protein 0.71 0.31 -0.3
35 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.32 -0.3
36 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 0.71 0.3 -0.32
37 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 -0.7 0.3 -0.32
38 AT3G61170 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.3 -0.32
39 AT1G62085 Mitochondrial transcription termination factor family
protein		 -0.7 0.31 -0.32
40 AT1G61390 S-locus lectin protein kinase family protein -0.7 0.32 -0.33
41 AT2G36730 Pentatricopeptide repeat (PPR) superfamily protein -0.7 0.29 -0.3
42 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.31 -0.31
43 AT1G63480 AT hook motif DNA-binding family protein -0.69 0.3 -0.31
44 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.69 0.32 -0.33
45 AT3G57430 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 84 -0.69 0.33 -0.3
46 AT1G80530 Major facilitator superfamily protein -0.68 0.3 -0.32
47 AT4G27510 unknown protein; Has 25 Blast hits to 23 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.32 -0.32
48 AT5G50350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.67 0.3 -0.34
49 AT2G06230 transposable element gene -0.67 0.3 -0.29
50 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 -0.67 0.32 -0.31
51 AT1G10750 Protein of Unknown Function (DUF239) -0.67 0.31 -0.33
52 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 -0.67 0.33 -0.33
53 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.3 -0.33
54 AT3G55690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39870.1); Has 76 Blast hits
to 69 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 3; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.32
55 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.66 0.3 -0.32
56 AT5G39960 GTP binding;GTP binding -0.66 0.31 -0.3
57 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 -0.66 0.34 -0.31
58 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.3 -0.31
59 AT1G03830 guanylate-binding family protein -0.65 0.29 -0.31
60 AT4G09110 RING/U-box superfamily protein -0.65 0.32 -0.32
61 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein -0.65 0.31 -0.29
62 AT5G06670 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.3 -0.32
63 AT3G20440 Alpha amylase family protein BRANCHING ENZYME 1, EMBRYO
DEFECTIVE 2729		 -0.64 0.31 -0.29
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
64 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		0.83 0.46 -0.45 C0120
65 C0134 Kaempferol-7-O-neohesperidoside - - - -0.74 0.43 -0.44