AT1G04945 : -
Query Information
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AGICode AT1G04945
Description HIT-type Zinc finger family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G04945 HIT-type Zinc finger family protein 1 0.31 -0.31
2 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 0.87 0.29 -0.31
3 AT1G79150 binding 0.86 0.32 -0.35
4 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.86 0.33 -0.34
5 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 0.84 0.3 -0.3
6 AT4G12750 Homeodomain-like transcriptional regulator 0.83 0.32 -0.32
7 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.83 0.35 -0.33
8 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.82 0.32 -0.33
9 AT2G24500 Zinc finger protein 622 FZF 0.82 0.31 -0.3
10 AT5G06550 CONTAINS InterPro DOMAIN/s: Transcription factor
jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347),
F-box domain, Skp2-like (InterPro:IPR022364), Transcription
factor jumonji (InterPro:IPR013129); BEST Arabidopsis
thaliana protein match is: transferases, transferring
glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to
1747 proteins in 292 species: Archae - 0; Bacteria - 297;
Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink).		 0.82 0.33 -0.3
11 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 0.82 0.31 -0.3
12 AT2G40360 Transducin/WD40 repeat-like superfamily protein 0.81 0.31 -0.32
13 AT1G61640 Protein kinase superfamily protein 0.81 0.29 -0.32
14 AT3G55510 Noc2p family REBELOTE 0.81 0.33 -0.3
15 AT1G10270 glutamine-rich protein 23 glutamine-rich protein 23 0.8 0.32 -0.33
16 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.8 0.31 -0.31
17 AT5G59980 Polymerase/histidinol phosphatase-like 0.8 0.31 -0.3
18 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.8 0.33 -0.32
19 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.3 -0.33
20 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.79 0.32 -0.31
21 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.79 0.31 -0.31
22 AT1G51380 DEA(D/H)-box RNA helicase family protein 0.79 0.32 -0.31
23 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain 0.79 0.31 -0.32
24 AT3G07750 3'-5'-exoribonuclease family protein 0.79 0.31 -0.32
25 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE 0.79 0.32 -0.32
26 AT1G52160 tRNAse Z3 tRNAse Z3 0.79 0.29 -0.31
27 AT2G03670 cell division cycle 48B cell division cycle 48B 0.78 0.31 -0.31
28 AT3G07050 GTP-binding family protein nucleostemin-like 1 0.78 0.31 -0.32
29 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein -0.78 0.32 -0.29
30 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 0.78 0.33 -0.34
31 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.31 -0.31
32 AT1G75670 DNA-directed RNA polymerases 0.78 0.29 -0.33
33 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.78 0.31 -0.32
34 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 0.78 0.32 -0.31
35 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.78 0.32 -0.34
36 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.77 0.31 -0.32
37 AT3G59820 LETM1-like protein 0.77 0.31 -0.31
38 AT3G07310 Protein of unknown function (DUF760) -0.77 0.31 -0.33
39 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.77 0.31 -0.33
40 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.77 0.32 -0.31
41 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.77 0.31 -0.29
42 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 0.77 0.31 -0.32
43 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.77 0.32 -0.32
44 AT5G22840 Protein kinase superfamily protein 0.77 0.32 -0.32
45 AT2G18330 AAA-type ATPase family protein 0.76 0.3 -0.32
46 AT5G17270 Protein prenylyltransferase superfamily protein 0.76 0.32 -0.31
47 AT5G64420 DNA polymerase V family 0.76 0.34 -0.3
48 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.76 0.32 -0.32
49 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.76 0.31 -0.33
50 AT5G15550 Transducin/WD40 repeat-like superfamily protein 0.76 0.32 -0.32
51 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.76 0.35 -0.3
52 AT3G06530 ARM repeat superfamily protein 0.76 0.32 -0.32
53 AT1G06900 Insulinase (Peptidase family M16) family protein 0.76 0.3 -0.31
54 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 0.75 0.29 -0.3
55 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.75 0.34 -0.33
56 AT1G14300 ARM repeat superfamily protein 0.75 0.3 -0.3
57 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.31 -0.34
58 AT1G06380 Ribosomal protein L1p/L10e family 0.75 0.33 -0.32
59 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.75 0.32 -0.3
60 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.75 0.32 -0.31
61 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.75 0.29 -0.34
62 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 0.74 0.3 -0.31
63 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.74 0.32 -0.33
64 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 0.74 0.33 -0.33
65 AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 0.74 0.3 -0.31
66 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 0.74 0.31 -0.31
67 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.74 0.33 -0.33
68 AT3G56990 embryo sac development arrest 7 embryo sac development arrest 7 0.73 0.34 -0.3
69 AT1G06440 Ubiquitin carboxyl-terminal hydrolase family protein 0.73 0.33 -0.3
70 AT3G01820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.32 -0.32
71 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 0.73 0.31 -0.33
72 AT1G06560 NOL1/NOP2/sun family protein 0.73 0.31 -0.33
73 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.73 0.31 -0.29
74 AT1G76120 Pseudouridine synthase family protein 0.73 0.32 -0.33
75 AT1G04900 Protein of unknown function (DUF185) 0.73 0.31 -0.35
76 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2		 0.73 0.32 -0.32
77 AT3G62310 RNA helicase family protein 0.73 0.34 -0.3
78 AT1G62740 stress-inducible protein, putative Hop2 0.73 0.3 -0.32
79 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.32 -0.34
80 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10		 0.73 0.29 -0.31
81 AT1G25350 glutamine-tRNA ligase, putative / glutaminyl-tRNA
synthetase, putative / GlnRS, putative		 ovule abortion 9 0.73 0.29 -0.32
82 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 -0.73 0.31 -0.31
83 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.73 0.32 -0.31
84 AT3G24080 KRR1 family protein 0.73 0.32 -0.3
85 AT1G24764 microtubule-associated proteins 70-2 microtubule-associated proteins
70-2, microtubule-associated
proteins 70-2		 -0.73 0.29 -0.28
86 AT4G38150 Pentatricopeptide repeat (PPR) superfamily protein 0.73 0.31 -0.3
87 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.73 0.32 -0.3
88 AT1G04350 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.72 0.32 -0.33
89 AT2G41870 Remorin family protein -0.72 0.29 -0.29
90 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).		 -0.72 0.33 -0.33
91 AT1G19000 Homeodomain-like superfamily protein -0.7 0.31 -0.31
92 AT2G42750 DNAJ heat shock N-terminal domain-containing protein -0.69 0.32 -0.3
93 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein -0.68 0.33 -0.32
94 AT3G19000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.68 0.3 -0.31
95 AT4G20820 FAD-binding Berberine family protein -0.68 0.31 -0.31
96 AT5G16940 carbon-sulfur lyases -0.67 0.3 -0.33
97 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.28
98 AT5G24930 CONSTANS-like 4 ATCOL4, CONSTANS-like 4 -0.67 0.31 -0.31
99 AT5G07080 HXXXD-type acyl-transferase family protein -0.66 0.3 -0.29
100 AT5G18140 Chaperone DnaJ-domain superfamily protein -0.66 0.31 -0.32
101 AT3G10200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.32 -0.31
102 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.66 0.32 -0.3
103 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.66 0.32 -0.32
104 AT1G34640 peptidases -0.66 0.3 -0.31
105 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.65 0.31 -0.31
106 AT1G33780 Protein of unknown function (DUF179) -0.65 0.31 -0.29
107 AT4G12690 Plant protein of unknown function (DUF868) -0.65 0.31 -0.32
108 AT4G13830 DNAJ-like 20 DNAJ-like 20 -0.64 0.34 -0.31
109 AT2G37790 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C10		 -0.64 0.32 -0.34
110 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.64 0.32 -0.33
111 AT1G27690 Protein of unknown function (DUF620) -0.64 0.32 -0.33
112 AT1G79420 Protein of unknown function (DUF620) -0.63 0.3 -0.31
113 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.3 -0.3
114 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 -0.63 0.31 -0.3
115 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.63 0.31 -0.32
116 AT5G03170 FASCICLIN-like arabinogalactan-protein 11 ARABIDOPSIS FASCICLIN-LIKE
ARABINOGALACTAN-PROTEIN 11,
FASCICLIN-like
arabinogalactan-protein 11		 -0.63 0.32 -0.31
117 AT3G26510 Octicosapeptide/Phox/Bem1p family protein -0.63 0.31 -0.32
118 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.32 -0.33
119 AT2G38820 Protein of unknown function (DUF506) -0.62 0.32 -0.3
120 AT3G07880 Immunoglobulin E-set superfamily protein SUPERCENTIPEDE1 -0.62 0.33 -0.33
121 AT5G02560 histone H2A 12 histone H2A 12 -0.62 0.3 -0.31
122 AT5G44060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.3 -0.31
123 AT5G54520 Transducin/WD40 repeat-like superfamily protein -0.61 0.34 -0.32
124 AT3G18035 winged-helix DNA-binding transcription factor family
protein		 HON4 -0.61 0.32 -0.31
125 AT4G28240 Wound-responsive family protein -0.61 0.3 -0.31
126 AT1G12550 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 hydroxypyruvate reductase 3 -0.61 0.32 -0.33
127 AT1G78020 Protein of unknown function (DUF581) -0.61 0.3 -0.34
128 AT5G47390 myb-like transcription factor family protein -0.61 0.28 -0.35
129 AT1G67890 PAS domain-containing protein tyrosine kinase family
protein		 -0.6 0.31 -0.34
130 AT3G56400 WRKY DNA-binding protein 70 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 70, WRKY
DNA-binding protein 70		 -0.6 0.31 -0.3
131 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 -0.6 0.32 -0.32
132 AT4G30520 Leucine-rich repeat protein kinase family protein SENESCENCE-ASSOCIATED
RECEPTOR-LIKE KINASE		 -0.6 0.34 -0.31
133 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 -0.6 0.31 -0.33
134 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.6 0.32 -0.31
135 AT3G01980 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.32 -0.33