AT1G04880 : -
Query Information
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AGICode AT1G04880
Description HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G04880 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 1 0.31 -0.32
2 AT3G11640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G52480.1); Has 36 Blast
hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.32 -0.31
3 AT1G14020 O-fucosyltransferase family protein 0.78 0.31 -0.3
4 AT2G23160 F-box family protein 0.78 0.32 -0.32
5 AT2G36210 SAUR-like auxin-responsive protein family 0.77 0.31 -0.31
6 AT5G39420 CDC2C CDC2C -0.77 0.31 -0.33
7 AT4G03840 transposable element gene -0.76 0.3 -0.32
8 AT3G10590 Duplicated homeodomain-like superfamily protein -0.76 0.32 -0.31
9 AT2G15750 transposable element gene 0.76 0.32 -0.3
10 AT1G10980 Lung seven transmembrane receptor family protein 0.76 0.32 -0.32
11 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.75 0.3 -0.31
12 AT5G13570 decapping 2 ATDCP2, decapping 2, TRIDENT -0.74 0.31 -0.34
13 AT2G06120 transposable element gene 0.74 0.31 -0.3
14 AT5G35640 Putative endonuclease or glycosyl hydrolase 0.73 0.31 -0.32
15 AT5G60280 Concanavalin A-like lectin protein kinase family protein 0.73 0.34 -0.31
16 AT3G24280 small acidic protein 2 small acidic protein 2 0.73 0.29 -0.34
17 AT5G38460 ALG6, ALG8 glycosyltransferase family 0.73 0.29 -0.3
18 AT5G59680 Leucine-rich repeat protein kinase family protein 0.73 0.33 -0.32
19 AT2G38650 galacturonosyltransferase 7 galacturonosyltransferase 7, LIKE
GLYCOSYL TRANSFERASE 7		 0.72 0.31 -0.3
20 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.32 -0.3
21 AT4G31760 Peroxidase superfamily protein 0.72 0.33 -0.31
22 AT2G41310 response regulator 3 RESPONSE REGULATOR 8, response
regulator 3, response regulator 3		 0.71 0.31 -0.31
23 AT5G30480 transposable element gene -0.71 0.3 -0.31
24 AT5G06480 Immunoglobulin E-set superfamily protein -0.71 0.33 -0.32
25 AT1G49370 pseudogene, similar to OSJNBa0072F16.8, blastp match of 42%
identity and 6.6e-73 P-value to
GP|21739229|emb|CAD40984.1||AL606460 OSJNBa0072F16.8 {Oryza
sativa (japonica cultivar-group)}		 0.71 0.32 -0.29
26 AT5G30380 transposable element gene 0.71 0.33 -0.31
27 AT3G57900 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.3 -0.33
28 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 0.71 0.32 -0.32
29 AT2G29820 Galactose oxidase/kelch repeat superfamily protein 0.71 0.32 -0.32
30 AT3G62760 Glutathione S-transferase family protein ATGSTF13 0.71 0.32 -0.32
31 AT2G38520 transposable element gene 0.71 0.3 -0.29
32 AT4G39100 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 short life -0.7 0.3 -0.32
33 AT4G35370 Transducin/WD40 repeat-like superfamily protein 0.7 0.32 -0.33
34 AT4G13060 F-box associated ubiquitination effector family protein 0.7 0.33 -0.34
35 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 0.7 0.32 -0.33
36 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 0.7 0.33 -0.29
37 AT5G39560 Galactose oxidase/kelch repeat superfamily protein 0.7 0.32 -0.32
38 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein -0.7 0.31 -0.32
39 AT4G28395 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 ANTHER 7, ARABIDOPSIS THALIANA
ANTHER 7		 0.7 0.3 -0.31
40 AT4G18530 Protein of unknown function (DUF707) -0.7 0.36 -0.31
41 AT3G31915 transposable element gene -0.7 0.3 -0.32
42 AT4G03040 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT5G33330.1); Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.33 -0.3
43 AT2G26210 Ankyrin repeat family protein -0.69 0.3 -0.32
44 AT1G21340 Dof-type zinc finger DNA-binding family protein 0.69 0.34 -0.31
45 AT1G66120 AMP-dependent synthetase and ligase family protein 0.69 0.29 -0.32
46 AT3G57970 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 -0.69 0.33 -0.33
47 AT5G37640 ubiquitin 9 ubiquitin 9 -0.68 0.31 -0.3
48 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.68 0.33 -0.3
49 AT2G36700 Pectin lyase-like superfamily protein 0.68 0.32 -0.33
50 AT4G39110 Malectin/receptor-like protein kinase family protein 0.68 0.31 -0.29
51 AT3G19320 Leucine-rich repeat (LRR) family protein 0.68 0.32 -0.31
52 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 0.68 0.32 -0.34
53 AT2G19830 SNF7 family protein SNF7.2, VPS32 -0.68 0.32 -0.31
54 AT1G54450 Calcium-binding EF-hand family protein 0.68 0.31 -0.32
55 AT3G21175 ZIM-like 1 GATA TRANSCRIPTION FACTOR 24,
TIFY2B, ZIM LIKE 1, ZIM-like 1		 -0.68 0.31 -0.3
56 AT2G42060 Cysteine/Histidine-rich C1 domain family protein 0.68 0.31 -0.31
57 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 0.68 0.32 -0.3
58 AT4G01240 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.31 -0.33
59 AT2G10610 transposable element gene 0.68 0.32 -0.31
60 AT3G19880 F-box and associated interaction domains-containing protein 0.67 0.31 -0.32
61 AT4G23110 insulin-like growth factor binding 0.67 0.28 -0.32
62 AT1G58190 receptor like protein 9 receptor like protein 9, receptor
like protein 9		 0.67 0.32 -0.31
63 AT2G23660 LOB domain-containing protein 10 LOB domain-containing protein 10 0.67 0.29 -0.31
64 AT1G69210 Uncharacterised protein family UPF0090 0.67 0.34 -0.31
65 AT5G30420 pseudogene, hypothetical protein 0.67 0.3 -0.32
66 AT3G27950 GDSL-like Lipase/Acylhydrolase superfamily protein 0.67 0.32 -0.31
67 AT5G38260 Protein kinase superfamily protein 0.67 0.33 -0.31
68 AT3G46070 C2H2-type zinc finger family protein 0.67 0.31 -0.32
69 AT1G66440 Cysteine/Histidine-rich C1 domain family protein 0.67 0.32 -0.33
70 AT1G31530 DNAse I-like superfamily protein 0.67 0.31 -0.32
71 AT2G42450 alpha/beta-Hydrolases superfamily protein 0.67 0.33 -0.31
72 AT1G17744 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.32 -0.31
73 AT1G18340 basal transcription factor complex subunit-related 0.67 0.32 -0.31
74 AT4G24950 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.31 -0.31
75 AT3G12250 TGACG motif-binding factor 6 BZIP45, TGACG motif-binding factor
6		 -0.67 0.31 -0.29
76 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.67 0.28 -0.32
77 AT2G31860 pseudogene, poly (ADP-ribose) glycohydrolase, putative,
contains Pfam domain, PF05028: poly (ADP-ribose)
glycohydrolase (PARG); blastp match of 59% identity and
1.4e-19 P-value to EGAD|134505|143482 114E2.c protein
{Drosophila melanogaster}		 0.67 0.31 -0.29
78 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 0.66 0.32 -0.31
79 AT3G42690 transposable element gene 0.66 0.31 -0.33
80 AT3G59490 unknown protein; Has 30 Blast hits to 30 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.66 0.32 -0.29
81 AT2G11650 transposable element gene 0.66 0.32 -0.31
82 AT3G26150 cytochrome P450, family 71, subfamily B, polypeptide 16 cytochrome P450, family 71,
subfamily B, polypeptide 16		 0.66 0.32 -0.32
83 AT5G25820 Exostosin family protein 0.66 0.32 -0.33
84 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.31 -0.33
85 AT4G32780 phosphoinositide binding 0.66 0.32 -0.3
86 AT1G11970 Ubiquitin-like superfamily protein -0.66 0.32 -0.33
87 AT3G57680 Peptidase S41 family protein -0.66 0.32 -0.32
88 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 0.66 0.31 -0.33
89 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.31
90 AT1G59790 Cullin family protein 0.66 0.31 -0.34
91 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 0.66 0.34 -0.31
92 AT3G21520 DUF679 domain membrane protein 1 Arabidopsis thaliana DUF679 domain
membrane protein 1, DUF679 domain
membrane protein 1		 -0.66 0.3 -0.34
93 AT5G48450 SKU5 similar 3 SKU5 similar 3 0.66 0.3 -0.31
94 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 0.66 0.34 -0.32
95 AT4G08740 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.32 -0.32
96 AT1G31230 aspartate kinase-homoserine dehydrogenase i ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase i		 0.65 0.31 -0.31
97 AT5G49470 PAS domain-containing protein tyrosine kinase family
protein		 0.65 0.32 -0.31
98 AT1G65110 Ubiquitin carboxyl-terminal hydrolase-related protein -0.65 0.32 -0.31
99 AT2G40440 BTB/POZ domain-containing protein 0.65 0.32 -0.31
100 AT3G51500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.65 0.3 -0.31
101 AT1G71000 Chaperone DnaJ-domain superfamily protein -0.65 0.31 -0.31
102 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 0.65 0.3 -0.3
103 AT5G44330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.31 -0.33
104 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 -0.65 0.31 -0.33
105 AT5G38820 Transmembrane amino acid transporter family protein 0.65 0.34 -0.31
106 AT5G07680 NAC domain containing protein 80 Arabidopsis NAC domain containing
protein 79, NAC domain containing
protein 80, ATNAC4, NAC domain
containing protein 80		 0.65 0.31 -0.32
107 AT3G17630 cation/H+ exchanger 19 cation/H+ exchanger 19, cation/H+
exchanger 19		 0.65 0.32 -0.33
108 AT3G29660 transposable element gene -0.65 0.3 -0.32
109 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 -0.65 0.31 -0.31
110 AT1G37010 BEST Arabidopsis thaliana protein match is: spindle pole
body component 98 (TAIR:AT5G06680.1); Has 15 Blast hits to
15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 -0.64 0.33 -0.31
111 AT5G14300 prohibitin 5 prohibitin 5, prohibitin 5 -0.64 0.33 -0.31
112 AT1G20750 RAD3-like DNA-binding helicase protein -0.64 0.33 -0.3
113 AT1G26800 RING/U-box superfamily protein -0.64 0.33 -0.3
114 AT1G10010 amino acid permease 8 amino acid permease 8, ATAAP8 -0.64 0.32 -0.31
115 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.64 0.31 -0.3
116 AT1G62700 Arabidopsis NAC domain containing protein 26 Arabidopsis NAC domain containing
protein 26, VASCULAR RELATED
NAC-DOMAIN PROTEIN 5		 -0.64 0.32 -0.31
117 AT3G13620 Amino acid permease family protein -0.64 0.33 -0.31
118 AT3G32220 transposable element gene -0.64 0.31 -0.28
119 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.32 -0.33
120 AT1G31040 PLATZ transcription factor family protein -0.64 0.33 -0.32
121 AT1G12450 SNARE associated Golgi protein family -0.63 0.32 -0.31
122 AT3G47160 RING/U-box superfamily protein -0.63 0.3 -0.31
123 AT3G55740 proline transporter 2 PROLINE TRANSPORTER 2, proline
transporter 2		 -0.63 0.32 -0.33
124 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.32 -0.31
125 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 -0.63 0.32 -0.28
126 AT2G04020 GDSL-like Lipase/Acylhydrolase superfamily protein -0.63 0.32 -0.3
127 AT1G54955 transposable element gene -0.63 0.32 -0.31
128 AT2G19350 Eukaryotic protein of unknown function (DUF872) -0.63 0.32 -0.31
129 AT5G28620 protein kinase C-related -0.63 0.34 -0.31
130 AT4G07920 transposable element gene -0.63 0.3 -0.31
131 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.63 0.31 -0.31
132 AT1G51880 root hair specific 6 root hair specific 6 -0.63 0.31 -0.3
133 AT4G18720 Transcription factor IIS protein -0.62 0.32 -0.32
134 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).		 -0.62 0.31 -0.3
135 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 -0.62 0.31 -0.3
136 AT1G43886 transposable element gene -0.62 0.31 -0.31
137 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 -0.62 0.32 -0.31
138 AT5G58070 temperature-induced lipocalin TEMPERATURE-INDUCED LIPOCALIN,
temperature-induced lipocalin		 -0.62 0.31 -0.32
139 AT2G06020 Homeodomain-like superfamily protein -0.62 0.33 -0.33
140 AT3G30510 transposable element gene -0.62 0.31 -0.31
141 AT5G62250 microtubule-associated protein 65-9 microtubule-associated protein
65-9		 -0.62 0.31 -0.31
142 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein -0.62 0.34 -0.31
143 AT3G19680 Protein of unknown function (DUF1005) -0.62 0.32 -0.32
144 AT5G35820 transposable element gene -0.62 0.32 -0.33
145 AT2G26420 1-phosphatidylinositol-4-phosphate 5-kinase 3 1-phosphatidylinositol-4-phosphate
5-kinase 3		 -0.62 0.31 -0.33
146 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 -0.62 0.31 -0.33
147 AT4G39610 Protein of unknown function, DUF617 -0.61 0.3 -0.33
148 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.61 0.3 -0.31
149 AT1G56540 Disease resistance protein (TIR-NBS-LRR class) family -0.61 0.33 -0.29
150 AT3G07390 auxin-responsive family protein Auxin-Induced in Root cultures 12 -0.61 0.33 -0.29
151 AT2G21240 basic pentacysteine 4 BASIC PENTACYSTEINE 4, BBR, basic
pentacysteine 4		 -0.61 0.33 -0.32
152 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 -0.61 0.33 -0.32
153 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.33 -0.32
154 AT1G33910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.31 -0.31
155 AT2G04038 basic leucine-zipper 48 basic leucine-zipper 48, basic
leucine-zipper 48		 -0.61 0.32 -0.33
156 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.61 0.31 -0.31