AT1G12860 : INDUCER OF CBF EXPRESSION 2
Query Information
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AGICode AT1G12860
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G12860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 INDUCER OF CBF EXPRESSION 2,
SCREAM 2		 1 0.34 -0.31
2 AT1G27120 Galactosyltransferase family protein 0.91 0.3 -0.33
3 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.91 0.31 -0.32
4 AT3G43540 Protein of unknown function (DUF1350) 0.9 0.35 -0.32
5 AT4G04350 tRNA synthetase class I (I, L, M and V) family protein EMBRYO DEFECTIVE 2369 0.9 0.32 -0.32
6 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.9 0.33 -0.31
7 AT5G15310 myb domain protein 16 ATMIXTA, myb domain protein 16,
myb domain protein 16		 0.9 0.3 -0.32
8 AT5G14260 Rubisco methyltransferase family protein 0.89 0.33 -0.35
9 AT1G60800 NSP-interacting kinase 3 NSP-interacting kinase 3 0.88 0.3 -0.32
10 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.32 -0.32
11 AT3G16000 MAR binding filament-like protein 1 MAR binding filament-like protein
1		 0.88 0.3 -0.29
12 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.88 0.32 -0.34
13 AT1G64150 Uncharacterized protein family (UPF0016) 0.88 0.34 -0.31
14 AT5G52100 Dihydrodipicolinate reductase, bacterial/plant chlororespiration reduction 1 0.88 0.29 -0.31
15 AT2G02500 Nucleotide-diphospho-sugar transferases superfamily protein ATMEPCT, ISPD,
2-C-METHYL-D-ERYTHRITOL
4-PHOSPHATE CYTIDYLTRANSFERASE		 0.87 0.33 -0.31
16 AT5G27560 Domain of unknown function (DUF1995) 0.87 0.32 -0.33
17 AT1G71720 Nucleic acid-binding proteins superfamily PIGMENT DEFECTIVE 338 0.87 0.29 -0.3
18 AT3G03710 polyribonucleotide nucleotidyltransferase, putative PIGMENT DEFECTIVE 326,
POLYNUCLEOTIDE PHOSPHORYLASE,
resistant to inhibition with FSM
10		 0.86 0.32 -0.31
19 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.86 0.31 -0.31
20 AT3G17680 Kinase interacting (KIP1-like) family protein 0.86 0.32 -0.31
21 AT1G12800 Nucleic acid-binding, OB-fold-like protein 0.86 0.3 -0.32
22 AT5G17660 tRNA (guanine-N-7) methyltransferase 0.86 0.31 -0.31
23 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.86 0.31 -0.3
24 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.86 0.31 -0.31
25 AT5G39210 chlororespiratory reduction 7 CHLORORESPIRATORY REDUCTION 7 0.86 0.31 -0.3
26 AT4G32570 TIFY domain protein 8 TIFY domain protein 8 0.86 0.31 -0.33
27 AT4G12970 stomagen EPFL9, STOMAGEN 0.86 0.32 -0.31
28 AT2G41340 RNA polymerase II fifth largest subunit, D RNA polymerase II fifth largest
subunit, D		 0.86 0.32 -0.31
29 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.85 0.31 -0.31
30 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.85 0.33 -0.29
31 AT5G47500 Pectin lyase-like superfamily protein pectin methylesterase 5 0.85 0.33 -0.34
32 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.85 0.32 -0.31
33 AT3G17040 high chlorophyll fluorescent 107 high chlorophyll fluorescent 107 0.85 0.32 -0.3
34 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.85 0.32 -0.32
35 AT5G08650 Small GTP-binding protein 0.85 0.3 -0.31
36 AT3G63510 FMN-linked oxidoreductases superfamily protein 0.85 0.3 -0.31
37 AT3G54890 photosystem I light harvesting complex gene 1 photosystem I light harvesting
complex gene 1		 0.84 0.32 -0.33
38 AT4G23940 FtsH extracellular protease family 0.84 0.33 -0.32
39 AT1G14840 microtubule-associated proteins 70-4 microtubule-associated proteins
70-4, microtubule-associated
proteins 70-4		 0.84 0.33 -0.32
40 AT4G26555 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.31 -0.32
41 AT4G23885 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.84 0.31 -0.3
42 AT5G01240 like AUXIN RESISTANT 1 like AUXIN RESISTANT 1 0.84 0.33 -0.3
43 AT3G62000 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.84 0.31 -0.32
44 AT1G74880 NAD(P)H:plastoquinone dehydrogenase complex subunit O NAD(P)H:plastoquinone
dehydrogenase complex subunit O,
NADH dehydrogenase-like complex )		 0.84 0.33 -0.31
45 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.84 0.31 -0.31
46 AT1G14440 homeobox protein 31 homeobox protein 31, homeobox
protein 31, ZINC FINGER
HOMEODOMAIN 4		 0.84 0.32 -0.31
47 AT4G09010 ascorbate peroxidase 4 ascorbate peroxidase 4, thylakoid
lumen 29		 0.84 0.31 -0.3
48 AT1G51080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 11 growth stages; Has 101 Blast hits to 98 proteins
in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38;
Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.84 0.31 -0.32
49 AT1G09970 Leucine-rich receptor-like protein kinase family protein LRR XI-23, receptor-like kinase 7 -0.84 0.31 -0.32
50 AT2G13440 glucose-inhibited division family A protein 0.84 0.3 -0.31
51 AT4G37080 Protein of unknown function, DUF547 0.84 0.32 -0.3
52 AT4G03210 xyloglucan endotransglucosylase/hydrolase 9 xyloglucan
endotransglucosylase/hydrolase 9		 0.83 0.3 -0.3
53 AT1G68780 RNI-like superfamily protein 0.83 0.33 -0.34
54 AT3G05470 Actin-binding FH2 (formin homology 2) family protein 0.83 0.33 -0.3
55 AT1G30520 acyl-activating enzyme 14 acyl-activating enzyme 14 0.83 0.32 -0.29
56 AT3G18390 CRS1 / YhbY (CRM) domain-containing protein embryo defective 1865 0.83 0.33 -0.32
57 AT4G34220 Leucine-rich repeat protein kinase family protein 0.83 0.31 -0.33
58 AT3G26744 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 A. THALIANA INDUCER OF CBP
EXPRESSION 1, INDUCER OF CBF
EXPRESSION 1, SCREAM		 0.83 0.32 -0.31
59 AT2G22650 FAD-dependent oxidoreductase family protein 0.83 0.34 -0.32
60 AT2G02170 Remorin family protein 0.83 0.32 -0.3
61 AT1G11600 cytochrome P450, family 77, subfamily B, polypeptide 1 cytochrome P450, family 77,
subfamily B, polypeptide 1		 0.83 0.32 -0.3
62 AT4G21750 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 MERISTEM LAYER 1 0.83 0.3 -0.31
63 AT2G48120 pale cress protein (PAC) PALE CRESS 0.83 0.34 -0.32
64 AT5G02160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 121
Blast hits to 121 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.82 0.32 -0.31
65 AT4G21680 NITRATE TRANSPORTER 1.8 NITRATE TRANSPORTER 1.8 -0.82 0.29 -0.32
66 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 0.82 0.31 -0.3
67 AT2G01760 response regulator 14 response regulator 14, response
regulator 14		 0.82 0.3 -0.31
68 AT1G01790 K+ efflux antiporter 1 K+ EFFLUX ANTIPORTER 1, K+ efflux
antiporter 1		 0.82 0.33 -0.32
69 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 peroxisomal NAD-malate
dehydrogenase 2		 0.82 0.31 -0.32
70 AT1G16720 high chlorophyll fluorescence phenotype 173 high chlorophyll fluorescence
phenotype 173		 0.82 0.32 -0.3
71 AT1G18650 plasmodesmata callose-binding protein 3 plasmodesmata callose-binding
protein 3		 0.82 0.33 -0.32
72 AT2G31390 pfkB-like carbohydrate kinase family protein -0.82 0.31 -0.3
73 AT3G26932 dsRNA-binding protein 3 dsRNA-binding protein 3 0.82 0.32 -0.33
74 AT2G35450 catalytics;hydrolases 0.82 0.29 -0.31
75 AT4G35920 PLAC8 family protein mid1-complementing activity 1 0.82 0.35 -0.33
76 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.82 0.31 -0.32
77 AT1G12330 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi -
14; Plants - 217; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.82 0.29 -0.31
78 AT1G62030 Cysteine/Histidine-rich C1 domain family protein 0.82 0.32 -0.34
79 AT5G45040 Cytochrome c cytochrome c6A 0.82 0.3 -0.33
80 AT4G14770 TESMIN/TSO1-like CXC 2 TESMIN/TSO1-LIKE CXC 2,
TESMIN/TSO1-like CXC 2		 0.82 0.3 -0.32
81 AT2G45770 signal recognition particle receptor protein, chloroplast
(FTSY)		 CPFTSY, FERRIC CHELATE REDUCTASE
DEFECTIVE 4		 0.82 0.32 -0.3
82 AT4G33000 calcineurin B-like protein 10 ATCBL10, calcineurin B-like
protein 10, SOS3-LIKE CALCIUM
BINDING PROTEIN 8		 0.82 0.33 -0.31
83 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.82 0.33 -0.3
84 AT1G14330 Galactose oxidase/kelch repeat superfamily protein -0.81 0.31 -0.33
85 AT5G65020 annexin 2 annexin 2 -0.81 0.33 -0.32
86 AT4G38540 FAD/NAD(P)-binding oxidoreductase family protein -0.8 0.3 -0.3
87 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.8 0.31 -0.31
88 AT5G12880 proline-rich family protein -0.8 0.32 -0.31
89 AT3G02360 6-phosphogluconate dehydrogenase family protein -0.79 0.32 -0.31
90 AT1G63460 glutathione peroxidase 8 ATGPX8, glutathione peroxidase 8 -0.79 0.32 -0.34
91 AT3G28850 Glutaredoxin family protein -0.79 0.3 -0.31
92 AT3G59700 lectin-receptor kinase lectin-receptor kinase,
lectin-receptor kinase,
LECTIN-RECEPTOR KINASE 1		 -0.78 0.31 -0.32
93 AT3G26090 G-protein coupled receptors;GTPase activators REGULATOR OF G-PROTEIN SIGNALING
1, REGULATOR OF G-PROTEIN
SIGNALING 1		 -0.78 0.31 -0.32
94 AT5G40760 glucose-6-phosphate dehydrogenase 6 glucose-6-phosphate dehydrogenase
6		 -0.78 0.32 -0.31
95 AT4G19880 Glutathione S-transferase family protein -0.77 0.31 -0.31
96 AT1G08315 ARM repeat superfamily protein -0.77 0.31 -0.32
97 AT2G18690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF975 (InterPro:IPR010380);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G18680.1); Has 213 Blast hits to 211 proteins in
20 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi -
0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.31 -0.28
98 AT5G19550 aspartate aminotransferase 2 ASPARTATE AMINOTRANSFERASE 2,
aspartate aminotransferase 2		 -0.77 0.31 -0.32
99 AT4G25900 Galactose mutarotase-like superfamily protein -0.76 0.33 -0.3
100 AT3G47780 ABC2 homolog 6 ATP-binding cassette A7, A.
THALIANA ABC2 HOMOLOG 6, ABC2
homolog 6		 -0.76 0.31 -0.32
101 AT2G17290 Calcium-dependent protein kinase family protein ARABIDOPSIS THALIANA
CALMODULIN-DOMAIN PROTEIN KINASE
3, ARABIDOPSIS THALIANA
CALCIUM-DEPENDENT PROTEIN KINASE
6, calcium dependent protein
kinase 6		 -0.76 0.34 -0.34
102 AT1G67810 sulfur E2 sulfur E2 -0.76 0.33 -0.3
103 AT3G28450 Leucine-rich repeat protein kinase family protein -0.76 0.31 -0.31
104 AT1G21370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF218 (InterPro:IPR003848); Has 160 Blast
hits to 160 proteins in 86 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 102; Plants - 44; Viruses - 0;
Other Eukaryotes - 14 (source: NCBI BLink).		 -0.75 0.32 -0.31
105 AT3G26590 MATE efflux family protein -0.75 0.32 -0.3
106 AT4G34180 Cyclase family protein -0.75 0.31 -0.35
107 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.32 -0.3
108 AT4G24110 unknown protein; Has 76 Blast hits to 76 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.32 -0.3
109 AT1G15670 Galactose oxidase/kelch repeat superfamily protein -0.75 0.32 -0.32
110 AT4G29690 Alkaline-phosphatase-like family protein -0.74 0.33 -0.31
111 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.74 0.31 -0.33
112 AT1G09850 xylem bark cysteine peptidase 3 xylem bark cysteine peptidase 3 -0.74 0.33 -0.33
113 AT2G43535 Scorpion toxin-like knottin superfamily protein -0.74 0.33 -0.34
114 AT4G23010 UDP-galactose transporter 2 ATUTR2, UDP-galactose transporter
2		 -0.74 0.31 -0.32
115 AT2G17520 Endoribonuclease/protein kinase IRE1-like ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-2, INOSITOL REQUIRING
1-2, IRE1A		 -0.73 0.32 -0.31
116 AT3G01930 Major facilitator superfamily protein -0.73 0.34 -0.33
117 AT4G23470 PLAC8 family protein -0.73 0.32 -0.29
118 AT4G39955 alpha/beta-Hydrolases superfamily protein -0.73 0.3 -0.31
119 AT5G44380 FAD-binding Berberine family protein -0.73 0.3 -0.31
120 AT2G02990 ribonuclease 1 RIBONUCLEASE 1, ribonuclease 1 -0.73 0.33 -0.31
121 AT1G18390 Protein kinase superfamily protein -0.72 0.31 -0.33
122 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.72 0.33 -0.32
123 AT1G34300 lectin protein kinase family protein -0.72 0.29 -0.3
124 AT2G38860 Class I glutamine amidotransferase-like superfamily protein YLS5 -0.72 0.32 -0.32
125 AT3G26470 Powdery mildew resistance protein, RPW8 domain -0.72 0.31 -0.33
126 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 -0.72 0.31 -0.28
127 AT2G40800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56430.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.72 0.29 -0.31
128 AT1G72280 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum
oxidoreductins 1, endoplasmic
reticulum oxidoreductins 1		 -0.72 0.32 -0.32
129 AT2G43610 Chitinase family protein -0.72 0.3 -0.29
130 AT1G07260 UDP-glucosyl transferase 71C3 UDP-glucosyl transferase 71C3 -0.71 0.31 -0.29
131 AT2G37110 PLAC8 family protein -0.71 0.33 -0.3
132 AT3G54960 PDI-like 1-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 1, PDI-like
1-3, PROTEIN DISULFIDE ISOMERASE
1, PDI-like 1-3		 -0.71 0.3 -0.32
133 AT2G01650 plant UBX domain-containing protein 2 plant UBX domain-containing
protein 2		 -0.71 0.31 -0.31
134 AT3G13790 Glycosyl hydrolases family 32 protein ATBFRUCT1, ARABIDOPSIS THALIANA
CELL WALL INVERTASE 1		 -0.71 0.33 -0.3
135 AT3G07760 Sterile alpha motif (SAM) domain-containing protein -0.71 0.31 -0.33
136 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 -0.71 0.31 -0.31
137 AT4G18010 myo-inositol polyphosphate 5-phosphatase 2 myo-inositol polyphosphate
5-phosphatase 2, myo-inositol
polyphosphate 5-phosphatase 2,
INOSITOL(1,4,5)P3 5-PHOSPHATASE II		 -0.71 0.32 -0.31
138 AT1G09560 germin-like protein 5 germin-like protein 5 -0.71 0.31 -0.3
139 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.71 0.31 -0.3
140 AT1G11580 methylesterase PCR A ATPMEPCRA, methylesterase PCR A -0.71 0.3 -0.3
141 AT5G58375 Methyltransferase-related protein -0.71 0.32 -0.3
142 AT2G15390 fucosyltransferase 4 atfut4, fucosyltransferase 4 -0.71 0.3 -0.33