AGICode | AT1G12910 |
Description | Transducin/WD40 repeat-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G12910 | Transducin/WD40 repeat-like superfamily protein | ANTHOCYANIN11, LIGHT-REGULATED WD 1 |
1 | 0.3 | -0.33 | ||
2 | AT2G17880 | Chaperone DnaJ-domain superfamily protein | 0.77 | 0.31 | -0.33 | |||
3 | AT3G07420 | asparaginyl-tRNA synthetase 2 | ASPARAGINYL-TRNA SYNTHETASE 2, asparaginyl-tRNA synthetase 2, SYNTHETASE C2, ASPARAGINYL-TRNA SYNTHETASE 2 |
-0.74 | 0.3 | -0.33 | ||
4 | AT1G27650 | U2 snRNP auxiliary factor small subunit, putative | ATU2AF35A | 0.74 | 0.29 | -0.3 | ||
5 | AT5G51910 | TCP family transcription factor | 0.74 | 0.3 | -0.31 | |||
6 | AT1G32230 | WWE protein-protein interaction domain protein family | ARABIDOPSIS THALIANA P8 (INTERACTING PROTEIN), AtRCD1, CEO, CEO1, RADICAL-INDUCED CELL DEATH1 |
-0.74 | 0.34 | -0.31 | ||
7 | AT3G12150 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.74 | 0.32 | -0.34 | |||
8 | AT5G55960 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.71 | 0.32 | -0.3 | |||
9 | AT5G21170 | 5'-AMP-activated protein kinase beta-2 subunit protein | AKINBETA1 | 0.71 | 0.33 | -0.31 | ||
10 | AT3G54040 | PAR1 protein | 0.7 | 0.33 | -0.3 | |||
11 | AT4G00040 | Chalcone and stilbene synthase family protein | -0.69 | 0.3 | -0.31 | |||
12 | AT5G43830 | Aluminium induced protein with YGL and LRDR motifs | 0.68 | 0.34 | -0.32 | |||
13 | AT4G30320 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
0.68 | 0.3 | -0.32 | |||
14 | AT1G09575 | Protein of unknown function (DUF607) | 0.68 | 0.32 | -0.31 | |||
15 | AT5G16110 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.32 | -0.33 | |||
16 | AT1G12560 | expansin A7 | ATEXP7, expansin A7, ATHEXP ALPHA 1.26, EXP7, expansin A7 |
0.67 | 0.34 | -0.33 | ||
17 | AT4G27450 | Aluminium induced protein with YGL and LRDR motifs | 0.67 | 0.32 | -0.31 | |||
18 | AT1G07170 | PHF5-like protein | 0.66 | 0.3 | -0.32 | |||
19 | AT1G27920 | microtubule-associated protein 65-8 | microtubule-associated protein 65-8 |
-0.66 | 0.32 | -0.31 | ||
20 | AT3G14020 | nuclear factor Y, subunit A6 | nuclear factor Y, subunit A6 | -0.66 | 0.31 | -0.3 | ||
21 | AT2G26280 | CTC-interacting domain 7 | CTC-interacting domain 7 | -0.66 | 0.29 | -0.32 | ||
22 | AT4G11240 | Calcineurin-like metallo-phosphoesterase superfamily protein |
TOPP7 | 0.66 | 0.31 | -0.3 | ||
23 | AT5G04470 | cyclin-dependent protein kinase inhibitors | SIAMESE | 0.66 | 0.32 | -0.34 | ||
24 | AT1G01040 | dicer-like 1 | ABNORMAL SUSPENSOR 1, DICER-LIKE 1, CARPEL FACTORY, dicer-like 1, EMBRYO DEFECTIVE 60, EMBRYO DEFECTIVE 76, SHORT INTEGUMENTS 1, SUSPENSOR 1 |
-0.65 | 0.31 | -0.3 | ||
25 | AT3G15370 | expansin 12 | ATEXP12, expansin 12, ATHEXP ALPHA 1.24, EXPANSIN 12, expansin 12 |
0.65 | 0.3 | -0.31 | ||
26 | AT5G43060 | Granulin repeat cysteine protease family protein | 0.65 | 0.32 | -0.32 | |||
27 | AT5G15120 | Protein of unknown function (DUF1637) | 0.65 | 0.33 | -0.31 | |||
28 | AT1G25230 | Calcineurin-like metallo-phosphoesterase superfamily protein |
0.65 | 0.32 | -0.31 | |||
29 | AT3G49790 | Carbohydrate-binding protein | 0.65 | 0.33 | -0.29 | |||
30 | AT2G37120 | S1FA-like DNA-binding protein | 0.64 | 0.32 | -0.31 | |||
31 | AT1G10570 | Cysteine proteinases superfamily protein | OVERLY TOLERANT TO SALT 2, UB-LIKE PROTEASE 1C |
-0.64 | 0.33 | -0.32 | ||
32 | AT3G61390 | RING/U-box superfamily protein | -0.64 | 0.3 | -0.32 | |||
33 | AT1G30870 | Peroxidase superfamily protein | 0.64 | 0.31 | -0.32 | |||
34 | AT2G32710 | Cyclin-dependent kinase inhibitor family protein | CYCLIN-DEPENDENT KINASE INHIBITOR 2, INTERACTORS OF CDC2 KINASE 7, KRP4, KIP-RELATED PROTEIN 4 |
0.64 | 0.32 | -0.31 | ||
35 | AT5G57530 | xyloglucan endotransglucosylase/hydrolase 12 | AtXTH12, xyloglucan endotransglucosylase/hydrolase 12 |
0.64 | 0.33 | -0.32 | ||
36 | AT5G02260 | expansin A9 | ATEXP9, expansin A9, ATHEXP ALPHA 1.10, EXP9, expansin A9 |
0.63 | 0.3 | -0.32 | ||
37 | AT2G24840 | AGAMOUS-like 61 | AGAMOUS-like 61, DIANA | 0.63 | 0.32 | -0.31 | ||
38 | AT2G39340 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3A, yeast Sac3 homolog A | -0.63 | 0.31 | -0.32 | ||
39 | AT5G46300 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.63 | 0.3 | -0.33 | |||
40 | AT5G14550 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.63 | 0.31 | -0.32 | |||
41 | AT1G60890 | Phosphatidylinositol-4-phosphate 5-kinase family protein | -0.63 | 0.3 | -0.29 | |||
42 | AT1G70290 | trehalose-6-phosphatase synthase S8 | ATTPS8, ATTPSC, trehalose-6-phosphatase synthase S8 |
0.63 | 0.32 | -0.33 | ||
43 | AT2G32950 | Transducin/WD40 repeat-like superfamily protein | ARABIDOPSIS THALIANA CONSTITUTIVE PHOTOMORPHOGENIC 1, CONSTITUTIVE PHOTOMORPHOGENIC 1, DEETIOLATED MUTANT 340, EMBRYO DEFECTIVE 168, FUSCA 1 |
-0.62 | 0.3 | -0.32 | ||
44 | AT5G64920 | COP1-interacting protein 8 | COP1-interacting protein 8 | 0.62 | 0.31 | -0.3 | ||
45 | AT1G33055 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.32 | -0.31 | |||
46 | AT1G13200 | F-box and associated interaction domains-containing protein | -0.62 | 0.31 | -0.29 | |||
47 | AT1G52240 | RHO guanyl-nucleotide exchange factor 11 | ATROPGEF11, phytochrome interacting RopGEF 1, RHO guanyl-nucleotide exchange factor 11 |
0.62 | 0.3 | -0.31 | ||
48 | AT5G05950 | maternal effect embryo arrest 60 | maternal effect embryo arrest 60 | 0.62 | 0.32 | -0.34 | ||
49 | AT1G21580 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.62 | 0.33 | -0.33 | |||
50 | AT2G39710 | Eukaryotic aspartyl protease family protein | -0.62 | 0.32 | -0.31 | |||
51 | AT4G12690 | Plant protein of unknown function (DUF868) | 0.62 | 0.27 | -0.3 | |||
52 | AT1G13050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). |
-0.61 | 0.33 | -0.35 | |||
53 | AT3G63390 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.61 | 0.32 | -0.3 | |||
54 | AT3G14720 | MAP kinase 19 | ARABIDOPSIS THALIANA MAP KINASE 19, MAP kinase 19 |
-0.61 | 0.3 | -0.32 | ||
55 | AT1G15200 | protein-protein interaction regulator family protein | -0.61 | 0.33 | -0.32 | |||
56 | AT5G39890 | Protein of unknown function (DUF1637) | 0.61 | 0.31 | -0.33 | |||
57 | AT3G12090 | tetraspanin6 | tetraspanin6 | 0.61 | 0.3 | -0.32 | ||
58 | AT2G17370 | 3-hydroxy-3-methylglutaryl-CoA reductase 2 | 3-hydroxy-3-methylglutaryl-CoA reductase 2, 3-HYDROXY-3-METHYLGLUTARYL-COENZYM E A REDUCTASE 2 |
0.6 | 0.31 | -0.33 | ||
59 | AT3G09470 | Major facilitator superfamily protein | 0.6 | 0.3 | -0.32 | |||
60 | AT3G18100 | myb domain protein 4r1 | myb domain protein 4R1, myb domain protein 4r1 |
-0.6 | 0.32 | -0.32 | ||
61 | AT3G07150 | unknown protein; Has 19 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.29 | -0.32 | |||
62 | AT1G24706 | THO2 | AtTHO2, EMBRYO DEFECTIVE 2793, THO2 |
-0.6 | 0.31 | -0.3 | ||
63 | AT3G33530 | Transducin family protein / WD-40 repeat family protein | -0.6 | 0.31 | -0.31 | |||
64 | AT1G13190 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.6 | 0.32 | -0.32 | |||
65 | AT5G01620 | TRICHOME BIREFRINGENCE-LIKE 35 | TRICHOME BIREFRINGENCE-LIKE 35 | 0.6 | 0.31 | -0.3 | ||
66 | AT3G27220 | Galactose oxidase/kelch repeat superfamily protein | 0.59 | 0.32 | -0.31 | |||
67 | AT3G15630 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.34 | -0.33 | |||
68 | AT4G31950 | cytochrome P450, family 82, subfamily C, polypeptide 3 | cytochrome P450, family 82, subfamily C, polypeptide 3 |
-0.59 | 0.3 | -0.32 | ||
69 | AT3G47610 | transcription regulators;zinc ion binding | 0.59 | 0.3 | -0.31 | |||
70 | AT2G17850 | Rhodanese/Cell cycle control phosphatase superfamily protein |
0.59 | 0.31 | -0.31 | |||
71 | AT5G37370 | PRP38 family protein | ATSRL1 | -0.59 | 0.33 | -0.3 | ||
72 | AT2G46560 | transducin family protein / WD-40 repeat family protein | -0.59 | 0.34 | -0.29 | |||
73 | AT1G28420 | homeobox-1 | homeobox-1 | -0.58 | 0.29 | -0.31 | ||
74 | AT5G59380 | methyl-CPG-binding domain 6 | ATMBD6, methyl-CPG-binding domain 6 |
0.58 | 0.31 | -0.32 | ||
75 | AT5G19660 | SITE-1 protease | SITE-1 PROTEASE, ATSBT6.1, SITE-1 protease |
-0.58 | 0.3 | -0.31 | ||
76 | AT4G09020 | isoamylase 3 | ATISA3, isoamylase 3 | -0.58 | 0.32 | -0.31 | ||
77 | AT3G12060 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 1 | 0.58 | 0.31 | -0.33 | ||
78 | AT1G68990 | male gametophyte defective 3 | male gametophyte defective 3 | -0.58 | 0.3 | -0.31 | ||
79 | AT3G06020 | Protein of unknown function (DUF3049) | FANTASTIC FOUR 4 | 0.58 | 0.31 | -0.32 | ||
80 | AT5G63190 | MA3 domain-containing protein | 0.58 | 0.3 | -0.29 | |||
81 | AT4G08410 | Proline-rich extensin-like family protein | 0.58 | 0.31 | -0.31 | |||
82 | AT1G17350 | NADH:ubiquinone oxidoreductase intermediate-associated protein 30 |
0.58 | 0.29 | -0.3 | |||
83 | AT3G47530 | Pentatricopeptide repeat (PPR) superfamily protein | -0.57 | 0.31 | -0.34 | |||
84 | AT3G58760 | Integrin-linked protein kinase family | -0.57 | 0.31 | -0.35 | |||
85 | AT4G36410 | ubiquitin-conjugating enzyme 17 | ubiquitin-conjugating enzyme 17 | 0.57 | 0.32 | -0.3 | ||
86 | AT4G07890 | transposable element gene | 0.57 | 0.3 | -0.33 | |||
87 | AT3G04730 | indoleacetic acid-induced protein 16 | indoleacetic acid-induced protein 16 |
0.57 | 0.31 | -0.31 | ||
88 | AT3G46200 | nudix hydrolase homolog 9 | nudix hydrolase homolog 9, nudix hydrolase homolog 9 |
-0.57 | 0.33 | -0.31 | ||
89 | AT1G53690 | DNA directed RNA polymerase, 7 kDa subunit | 0.57 | 0.32 | -0.31 | |||
90 | AT4G32030 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.56 | 0.32 | -0.32 | |||
91 | AT2G21460 | transposable element gene | 0.56 | 0.32 | -0.3 | |||
92 | AT3G47630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325 Blast hits to 325 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). |
0.56 | 0.29 | -0.3 | |||
93 | AT3G22680 | RNA-DIRECTED DNA METHYLATION 1 | RNA-DIRECTED DNA METHYLATION 1 | 0.56 | 0.32 | -0.31 | ||
94 | AT3G21430 | DNA binding | ALWAYS EARLY 3, ARABIDOPSIS THALIANA ALWAYS EARLY 3 |
-0.56 | 0.32 | -0.3 | ||
95 | AT2G41930 | Protein kinase superfamily protein | 0.56 | 0.31 | -0.31 | |||
96 | AT1G62260 | mitochondrial editing factor 9 | mitochondrial editing factor 9 | -0.55 | 0.3 | -0.32 | ||
97 | AT2G25900 | Zinc finger C-x8-C-x5-C-x3-H type family protein | ATCTH, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 |
0.55 | 0.33 | -0.33 | ||
98 | AT2G19630 | F-box and associated interaction domains-containing protein | -0.55 | 0.34 | -0.3 | |||
99 | AT5G51710 | K+ efflux antiporter 5 | ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 5, K+ efflux antiporter 5 |
-0.55 | 0.31 | -0.3 | ||
100 | AT3G29060 | EXS (ERD1/XPR1/SYG1) family protein | 0.55 | 0.31 | -0.3 | |||
101 | AT2G21380 | Kinesin motor family protein | -0.55 | 0.32 | -0.3 | |||
102 | AT5G60170 | RNA binding (RRM/RBD/RNP motifs) family protein | -0.55 | 0.3 | -0.31 | |||
103 | AT5G14770 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.55 | 0.31 | -0.3 | |||
104 | AT2G06110 | transposable element gene | -0.55 | 0.32 | -0.3 | |||
105 | AT3G62980 | F-box/RNI-like superfamily protein | AtTIR1, TRANSPORT INHIBITOR RESPONSE 1 |
0.55 | 0.31 | -0.31 | ||
106 | AT4G02430 | RNA-binding (RRM/RBD/RNP motifs) family protein | Serine/Arginine-Rich Protein Splicing Factor 34b, Serine/Arginine-Rich Protein Splicing Factor 34b |
-0.55 | 0.32 | -0.34 | ||
107 | AT5G63620 | GroES-like zinc-binding alcohol dehydrogenase family protein |
0.55 | 0.31 | -0.31 | |||
108 | AT1G01360 | regulatory component of ABA receptor 1 | PYRABACTIN RESISTANCE 1-LIKE 9, regulatory component of ABA receptor 1 |
0.55 | 0.31 | -0.33 | ||
109 | AT2G43220 | Cysteine/Histidine-rich C1 domain family protein | 0.55 | 0.29 | -0.32 | |||
110 | AT5G55160 | small ubiquitin-like modifier 2 | ATSUMO2, SMALL UBIQUITIN-LIKE MODIFIER 2, SMALL UBIQUITIN-LIKE MODIFIER 2, small ubiquitin-like modifier 2 |
0.55 | 0.33 | -0.33 | ||
111 | AT3G13810 | indeterminate(ID)-domain 11 | indeterminate(ID)-domain 11, indeterminate(ID)-domain 11 |
-0.54 | 0.31 | -0.32 | ||
112 | AT3G22121 | other RNA | -0.54 | 0.31 | -0.31 | |||
113 | AT4G36690 | U2 snRNP auxilliary factor, large subunit, splicing factor | ATU2AF65A | -0.54 | 0.31 | -0.3 | ||
114 | AT4G26630 | DEK domain-containing chromatin associated protein | -0.54 | 0.3 | -0.34 | |||
115 | AT4G11950 | Protein of unknown function (DUF1191) | -0.54 | 0.31 | -0.34 | |||
116 | AT3G19740 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.54 | 0.33 | -0.3 | |||
117 | AT4G19890 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.53 | 0.31 | -0.32 | |||
118 | AT1G13630 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.53 | 0.31 | -0.32 | |||
119 | AT2G47830 | Cation efflux family protein | -0.53 | 0.33 | -0.32 | |||
120 | AT3G13225 | WW domain-containing protein | -0.52 | 0.31 | -0.31 | |||
121 | AT2G31760 | RING/U-box superfamily protein | ARIADNE 10, ARABIDOPSIS ARIADNE 10 | -0.52 | 0.31 | -0.32 | ||
122 | AT3G53270 | Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein |
-0.52 | 0.32 | -0.31 | |||
123 | AT5G55660 | DEK domain-containing chromatin associated protein | -0.52 | 0.29 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
124 | C0107 | Glycine | - | Glycine | 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, folate polyglutamylation, gamma-glutamyl cycle (plant pathway), glutathione biosynthesis, glutathione-mediated detoxification II, folate transformations II, indole glucosinolate breakdown (active in intact plant cell), glycine cleavage complex, camalexin biosynthesis, thiamine biosynthesis II, tRNA charging, glycine biosynthesis, glutathione degradation, photorespiration |
-0.72 | 0.46 | -0.43 | ||
125 | C0117 | Hydroxyproline | (2S,4R)-Hydroxyproline | 4-Hydroxy-L-proline | protein precursor | -0.58 | 0.46 | -0.44 |