AT1G12790 : -
Query Information
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AGICode AT1G12790
Description CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G12790 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like
(InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.31 -0.28
2 AT4G19540 IND1(iron-sulfur protein required for NADH
dehydrogenase)-like		 iron-sulfur protein required for
NADH dehydrogenase,
IND1(iron-sulfur protein required
for NADH dehydrogenase)-like		 0.75 0.33 -0.3
3 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.71 0.3 -0.32
4 AT5G14570 high affinity nitrate transporter 2.7 high affinity nitrate transporter
2.7, high affinity nitrate
transporter 2.7		 -0.69 0.31 -0.31
5 AT3G26890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits
to 383 proteins in 134 species: Archae - 0; Bacteria - 61;
Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.69 0.34 -0.31
6 AT3G24840 Sec14p-like phosphatidylinositol transfer family protein -0.68 0.31 -0.3
7 ATMG00740 hypothetical protein ORF100A 0.67 0.3 -0.31
8 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 -0.67 0.29 -0.29
9 AT1G08980 amidase 1 amidase 1, AMIDASE-LIKE PROTEIN 1,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-I, TRANSLOCON AT THE OUTER
MEMBRANE OF CHLOROPLASTS 64-I		 0.66 0.31 -0.31
10 AT5G52640 heat shock protein 90.1 ATHS83, HEAT SHOCK PROTEIN 90-1,
heat shock protein 90.1, HEAT
SHOCK PROTEIN 81-1, HSP81.1, HEAT
SHOCK PROTEIN 83, heat shock
protein 90.1		 -0.66 0.33 -0.33
11 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein 0.65 0.34 -0.31
12 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.64 0.29 -0.3
13 AT1G53500 NAD-dependent epimerase/dehydratase family protein ARABIDOPSIS THALIANA
MUCILAGE-MODIFIED 4, ARABIDOPSIS
THALIANA RHAMNOSE BIOSYNTHESIS 2,
MUCILAGE-MODIFIED 4, RHAMNOSE
BIOSYNTHESIS 2		 -0.64 0.32 -0.32
14 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 0.64 0.31 -0.32
15 AT2G39570 ACT domain-containing protein ACT domain repeats 9 0.64 0.31 -0.32
16 AT4G19670 RING/U-box superfamily protein 0.62 0.31 -0.31
17 AT1G63500 Protein kinase protein with tetratricopeptide repeat domain -0.62 0.32 -0.32
18 AT1G18830 Transducin/WD40 repeat-like superfamily protein -0.61 0.31 -0.31
19 AT3G17280 F-box and associated interaction domains-containing protein 0.61 0.31 -0.29
20 AT3G47100 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.3 -0.31
21 AT5G54470 B-box type zinc finger family protein -0.61 0.33 -0.3
22 AT2G22960 alpha/beta-Hydrolases superfamily protein -0.61 0.31 -0.29
23 AT1G70360 F-box family protein 0.61 0.32 -0.3
24 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 0.61 0.32 -0.33
25 AT3G55580 Regulator of chromosome condensation (RCC1) family protein -0.61 0.32 -0.33
26 AT4G12640 RNA recognition motif (RRM)-containing protein -0.6 0.31 -0.33
27 AT1G63830 PLAC8 family protein -0.6 0.3 -0.33
28 AT4G00780 TRAF-like family protein 0.6 0.31 -0.32
29 AT3G22840 Chlorophyll A-B binding family protein ELIP, EARLY LIGHT-INDUCABLE
PROTEIN		 -0.6 0.29 -0.3
30 AT4G15750 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.6 0.32 -0.32
31 AT3G30710 transposable element gene 0.6 0.32 -0.31
32 AT2G06010 OBP3-responsive gene 4 OBP3-responsive gene 4 0.6 0.31 -0.3
33 AT5G55900 Sucrase/ferredoxin-like family protein 0.59 0.29 -0.32
34 AT3G09440 Heat shock protein 70 (Hsp 70) family protein -0.59 0.3 -0.33
35 AT3G42980 transposable element gene -0.59 0.3 -0.32
36 AT5G58760 damaged DNA binding 2 damaged DNA binding 2 -0.58 0.3 -0.32
37 AT1G35500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G35614.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.3 -0.32
38 AT1G54850 HSP20-like chaperones superfamily protein 0.58 0.31 -0.31
39 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.31 -0.3
40 AT2G35530 basic region/leucine zipper transcription factor 16 AtbZIP16, basic region/leucine
zipper transcription factor 16		 -0.58 0.33 -0.33
41 AT2G14910 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in
102 species: Archae - 0; Bacteria - 300; Metazoa - 25;
Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191
(source: NCBI BLink).		 0.58 0.28 -0.33
42 AT3G53260 phenylalanine ammonia-lyase 2 ATPAL2, phenylalanine
ammonia-lyase 2		 -0.58 0.31 -0.32
43 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain -0.58 0.32 -0.31
44 AT1G78710 TRICHOME BIREFRINGENCE-LIKE 42 TRICHOME BIREFRINGENCE-LIKE 42 0.58 0.31 -0.32
45 AT3G57890 Tubulin binding cofactor C domain-containing protein -0.58 0.32 -0.32
46 AT1G34545 transposable element gene 0.57 0.32 -0.31
47 AT1G02340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FBI1, LONG HYPOCOTYL IN FAR-RED,
REDUCED PHYTOCHROME SIGNALING 1,
REDUCED SENSITIVITY TO FAR-RED
LIGHT 1		 -0.57 0.29 -0.32
48 AT5G15060 Lateral organ boundaries (LOB) domain family protein -0.57 0.32 -0.31
49 AT4G04790 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.32 -0.3
50 AT1G70630 Nucleotide-diphospho-sugar transferase family protein -0.57 0.31 -0.33
51 AT5G64170 dentin sialophosphoprotein-related -0.57 0.32 -0.3
52 AT5G54480 Protein of unknown function (DUF630 and DUF632) -0.57 0.33 -0.3
53 AT1G43840 transposable element gene -0.57 0.32 -0.32
54 AT2G24830 zinc finger (CCCH-type) family protein / D111/G-patch
domain-containing protein		 0.57 0.32 -0.31
55 AT2G32750 Exostosin family protein -0.57 0.31 -0.33
56 AT2G04300 Leucine-rich repeat protein kinase family protein -0.56 0.3 -0.32
57 AT5G49500 Signal recognition particle, SRP54 subunit protein 0.56 0.3 -0.31
58 AT3G22050 Domain of unknown function (DUF26) -0.56 0.29 -0.32
59 AT4G17020 transcription factor-related 0.56 0.32 -0.31
60 AT4G25360 TRICHOME BIREFRINGENCE-LIKE 18 TRICHOME BIREFRINGENCE-LIKE 18 -0.56 0.31 -0.31
61 AT2G39090 tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex 7,
AtAPC7		 0.56 0.32 -0.3
62 AT2G02280 phloem protein 2-B4 phloem protein 2-B4, phloem
protein 2-B4		 -0.56 0.32 -0.29
63 AT4G32410 cellulose synthase 1 CELLULOSE SYNTHASE 1, cellulose
synthase 1, RADIALLY SWOLLEN 1		 -0.55 0.32 -0.3
64 AT3G17140 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.55 0.33 -0.31
65 AT5G37910 Protein with RING/U-box and TRAF-like domains 0.55 0.29 -0.31
66 AT2G18930 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.32 -0.31
67 AT1G74870 RING/U-box superfamily protein -0.55 0.3 -0.3
68 AT1G19170 Pectin lyase-like superfamily protein 0.55 0.33 -0.31
69 AT2G10630 transposable element gene -0.55 0.32 -0.32
70 AT2G33480 NAC domain containing protein 41 NAC domain containing protein 41,
NAC domain containing protein 41		 0.55 0.34 -0.3
71 AT3G16120 Dynein light chain type 1 family protein -0.55 0.3 -0.31
72 AT4G33650 dynamin-related protein 3A ARABIDOPSIS DYNAMIN-LIKE 2,
ABERRANT PEROXISOME MORPHOLOGY 1,
dynamin-related protein 3A		 -0.54 0.29 -0.3
73 AT4G38120 ARM repeat superfamily protein -0.54 0.31 -0.31
74 AT3G03320 RNA-binding ASCH domain protein 0.54 0.31 -0.3
75 AT1G10800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: inflorescence meristem,
hypocotyl, root, flower; EXPRESSED DURING: petal
differentiation and expansion stage; Has 23 Blast hits to
23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 -0.54 0.31 -0.32
76 AT1G27060 Regulator of chromosome condensation (RCC1) family protein 0.54 0.33 -0.3
77 AT5G44280 RING 1A ARABIDOPSIS THALIANA RING 1A, RING
1A		 -0.54 0.31 -0.31
78 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 0.54 0.31 -0.28
79 AT2G15930 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.31 -0.31
80 AT1G73760 RING/U-box superfamily protein -0.54 0.31 -0.32
81 AT1G06040 B-box zinc finger family protein B-box domain protein 24, SALT
TOLERANCE		 -0.54 0.32 -0.33
82 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 0.53 0.32 -0.32
83 AT3G06080 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 10 0.53 0.31 -0.3
84 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 -0.53 0.32 -0.3
85 AT5G06970 Protein of unknown function (DUF810) -0.53 0.33 -0.31
86 AT5G26640 BEST Arabidopsis thaliana protein match is:
anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2);
Has 293 Blast hits to 293 proteins in 137 species: Archae -
0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41;
Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).		 0.53 0.32 -0.31
87 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.32 -0.32
88 AT3G23900 RNA recognition motif (RRM)-containing protein -0.53 0.33 -0.32
89 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 0.53 0.34 -0.31
90 AT4G14610 pseudogene, disease resistance protein (CC-NBS-LRR class),
putative, domain signature CC-NBS-LRR exists, suggestive of
a disease resistance protein.; blastp match of 45% identity
and 2.2e-162 P-value to
GP|24461866|gb|AAN62353.1|AF506028_20|AF506028 NBS-LRR type
disease resistance protein {Poncirus trifoliata}		 0.53 0.3 -0.32
91 AT5G18710 Domain of unknown function (DUF3444) 0.53 0.31 -0.31
92 AT5G28490 Protein of unknown function (DUF640) LIGHT-DEPENDENT SHORT HYPOCOTYLS
1, ORGAN BOUNDARY 2		 -0.53 0.31 -0.3
93 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 0.53 0.34 -0.31
94 AT3G17900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 45
Blast hits to 44 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.53 0.29 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0215 PR_MST_2527.1 - - - -0.65 0.44 -0.46
96 C0080 Digalactosyldiacylglycerol-34:6 - Digalactosyldiacylglycerol-34:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.59 0.45 -0.43 C0080