AT1G32850 : ubiquitin-specific protease 11
Query Information
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AGICode AT1G32850
Description ubiquitin-specific protease 11
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 1 0.32 -0.32
2 AT5G38260 Protein kinase superfamily protein 0.83 0.31 -0.3
3 AT4G10220 Protein of Unknown Function (DUF239) 0.78 0.3 -0.3
4 AT3G23800 selenium-binding protein 3 selenium-binding protein 3 0.74 0.33 -0.33
5 AT5G35140 transposable element gene -0.74 0.33 -0.32
6 AT2G15750 transposable element gene 0.74 0.34 -0.32
7 AT4G19370 Protein of unknown function (DUF1218) 0.74 0.33 -0.34
8 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 0.73 0.31 -0.34
9 AT3G15890 Protein kinase superfamily protein -0.73 0.35 -0.32
10 AT1G18220 purine permease 9 purine permease 9, purine permease
9		 0.73 0.31 -0.33
11 AT5G65510 AINTEGUMENTA-like 7 AINTEGUMENTA-like 7, PLETHORA 7 0.72 0.32 -0.31
12 AT5G59590 UDP-glucosyl transferase 76E2 UDP-glucosyl transferase 76E2 0.72 0.33 -0.35
13 AT4G31760 Peroxidase superfamily protein 0.72 0.3 -0.31
14 AT2G24640 ubiquitin-specific protease 19 ubiquitin-specific protease 19 0.72 0.32 -0.3
15 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 -0.72 0.33 -0.29
16 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.72 0.31 -0.34
17 AT1G49190 response regulator 19 response regulator 19, response
regulator 19		 0.71 0.31 -0.33
18 AT1G59630 F-box associated ubiquitination effector family protein -0.71 0.32 -0.34
19 AT2G05850 serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 -0.7 0.33 -0.31
20 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.7 0.33 -0.31
21 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein 0.7 0.31 -0.33
22 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.34 -0.34
23 AT3G52460 hydroxyproline-rich glycoprotein family protein 0.7 0.31 -0.32
24 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.32 -0.31
25 AT4G05280 transposable element gene 0.68 0.32 -0.29
26 AT1G49250 ATP-dependent DNA ligase 0.68 0.3 -0.33
27 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein 0.68 0.34 -0.3
28 AT1G20550 O-fucosyltransferase family protein 0.68 0.31 -0.32
29 AT2G23480 transposable element gene -0.68 0.33 -0.29
30 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.68 0.33 -0.32
31 AT1G56290 CwfJ-like family protein -0.67 0.31 -0.31
32 AT4G18850 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.29 -0.34
33 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 -0.67 0.32 -0.31
34 AT2G20620 Protein of unknown function (DUF626) -0.67 0.33 -0.34
35 AT3G24680 transposable element gene 0.67 0.33 -0.34
36 AT3G05390 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF248, methyltransferase putative
(InterPro:IPR004159); BEST Arabidopsis thaliana protein
match is: S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein (TAIR:AT4G01240.1);
Has 507 Blast hits to 498 proteins in 33 species: Archae -
4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.67 0.33 -0.3
37 AT5G35820 transposable element gene -0.67 0.33 -0.32
38 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.67 0.3 -0.32
39 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.67 0.33 -0.32
40 AT1G67220 histone acetyltransferase of the CBP family 2 ARABIDOPSIS THALIANA P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
1, HAC02, histone
acetyltransferase of the CBP
family 2		 0.66 0.33 -0.34
41 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 0.66 0.33 -0.31
42 AT5G37420 Family of unknown function (DUF577) 0.66 0.3 -0.33
43 AT1G70180 Sterile alpha motif (SAM) domain-containing protein 0.66 0.29 -0.29
44 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 0.66 0.3 -0.29
45 AT1G32650 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.66 0.31 -0.31
46 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 -0.66 0.33 -0.33
47 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.66 0.33 -0.32
48 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 0.66 0.32 -0.32
49 AT5G13560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast
hits to 8846 proteins in 811 species: Archae - 217;
Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants -
528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI
BLink).		 0.65 0.3 -0.3
50 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 -0.65 0.29 -0.33
51 AT4G16780 homeobox protein 2 homeobox protein 2, ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2, HAT4,
homeobox protein 2		 -0.65 0.31 -0.33
52 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.32 -0.32
53 AT5G60090 Protein kinase superfamily protein 0.65 0.3 -0.31
54 AT4G29200 Beta-galactosidase related protein -0.65 0.32 -0.32
55 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 0.65 0.33 -0.3
56 AT4G18420 transposable element gene 0.65 0.33 -0.31
57 AT3G57970 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 -0.65 0.32 -0.32
58 AT5G23750 Remorin family protein -0.64 0.32 -0.33
59 AT4G35500 Protein kinase superfamily protein 0.64 0.33 -0.32
60 AT3G42440 transposable element gene 0.64 0.3 -0.3
61 AT1G26800 RING/U-box superfamily protein -0.64 0.33 -0.32
62 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1		 0.64 0.32 -0.32
63 AT1G06540 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30930.1); Has 16 Blast hits
to 16 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.34 -0.29
64 AT2G07360 SH3 domain-containing protein 0.64 0.32 -0.32
65 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.32 -0.31
66 AT2G37160 Transducin/WD40 repeat-like superfamily protein 0.63 0.32 -0.32
67 AT2G10010 transposable element gene 0.63 0.31 -0.31
68 AT1G31530 DNAse I-like superfamily protein 0.63 0.32 -0.31
69 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.28 -0.32
70 AT5G17140 Cysteine proteinases superfamily protein 0.63 0.29 -0.32
71 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.32 -0.32
72 AT1G20135 GDSL-like Lipase/Acylhydrolase family protein 0.63 0.31 -0.33
73 AT4G34320 Protein of unknown function (DUF677) 0.63 0.3 -0.32
74 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.33 -0.32
75 AT4G17690 Peroxidase superfamily protein -0.62 0.3 -0.31
76 AT4G04530 transposable element gene -0.62 0.32 -0.32
77 AT2G04000 transposable element gene -0.61 0.31 -0.29
78 AT2G10400 transposable element gene -0.61 0.32 -0.31
79 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family -0.6 0.31 -0.32
80 AT5G36190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: F-box
and associated interaction domains-containing protein
(TAIR:AT5G36200.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.33 -0.32
81 AT3G21660 UBX domain-containing protein -0.6 0.34 -0.32
82 AT1G41797 transposable element gene -0.6 0.31 -0.32
83 AT3G22940 F-box associated ubiquitination effector family protein -0.6 0.31 -0.32
84 AT1G09980 Putative serine esterase family protein -0.59 0.3 -0.3
85 AT2G23900 Pectin lyase-like superfamily protein -0.59 0.32 -0.31
86 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 -0.59 0.32 -0.3
87 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.29 -0.32
88 AT3G02270 Trimeric LpxA-like enzyme -0.59 0.31 -0.32
89 AT2G01780 Curculin-like (mannose-binding) lectin family protein -0.59 0.33 -0.3
90 AT3G18170 Glycosyltransferase family 61 protein -0.59 0.34 -0.31
91 AT5G42340 Plant U-Box 15 Plant U-Box 15 -0.58 0.31 -0.33
92 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.58 0.33 -0.31
93 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 -0.58 0.31 -0.29
94 AT3G09735 S1FA-like DNA-binding protein -0.58 0.33 -0.31
95 AT1G28327 unknown protein; Has 52 Blast hits to 52 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.32
96 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.33 -0.32
97 AT3G32090 WRKY family transcription factor -0.57 0.31 -0.32
98 AT4G23090 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.32
99 AT3G21830 SKP1-like 8 SKP1-like 8, SKP1-like 8 -0.57 0.3 -0.31
100 AT1G04650 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.3 -0.36
101 AT5G50750 reversibly glycosylated polypeptide 4 reversibly glycosylated
polypeptide 4		 -0.57 0.32 -0.31
102 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 -0.57 0.31 -0.33
103 AT2G01700 transposable element gene -0.57 0.31 -0.3
104 AT4G07580 transposable element gene -0.57 0.3 -0.31
105 AT5G35550 Duplicated homeodomain-like superfamily protein MYB DOMAIN PROTEIN 123, ATTT2, MYB
DOMAIN PROTEIN 123, TRANSPARENT
TESTA 2		 -0.57 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0145 Maltotetraose - Maltotetraose starch degradation II 0.82 0.45 -0.47 C0145
107 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		-0.74 0.49 -0.45 C0228