AT1G19980 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G19980
Description cytomatrix protein-related
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G19980 cytomatrix protein-related 1 0.31 -0.31
2 AT2G37420 ATP binding microtubule motor family protein 0.72 0.31 -0.33
3 AT1G76310 CYCLIN B2;4 CYCLIN B2;4 0.7 0.33 -0.33
4 AT2G44710 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.32 -0.32
5 AT1G52320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF632
(InterPro:IPR006867); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF630 and DUF632)
(TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in
62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi -
2; Plants - 427; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.66 0.33 -0.33
6 AT3G16550 DEGP protease 12 DEGP protease 12 -0.66 0.31 -0.3
7 AT4G26660 INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G55520.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.66 0.31 -0.33
8 AT4G35620 Cyclin B2;2 Cyclin B2;2 0.66 0.33 -0.31
9 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 -0.66 0.29 -0.33
10 AT5G62320 myb domain protein 99 myb domain protein 99, ATMYBCU15,
myb domain protein 99		 -0.65 0.32 -0.33
11 AT4G23730 Galactose mutarotase-like superfamily protein 0.64 0.32 -0.31
12 AT5G46740 ubiquitin-specific protease 21 ubiquitin-specific protease 21 0.64 0.31 -0.31
13 AT3G22050 Domain of unknown function (DUF26) -0.63 0.31 -0.31
14 AT2G17900 SET domain group 37 ASH1-related 1, SET domain group
37		 0.62 0.31 -0.33
15 AT5G01470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.62 0.32 -0.3
16 AT5G57520 zinc finger protein 2 ZINC FINGER PROTEIN 2, zinc finger
protein 2		 -0.61 0.29 -0.31
17 AT5G58940 calmodulin-binding receptor-like cytoplasmic kinase 1 calmodulin-binding receptor-like
cytoplasmic kinase 1		 -0.6 0.32 -0.32
18 AT3G51940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03990.1); Has 215 Blast hits
to 164 proteins in 38 species: Archae - 0; Bacteria - 35;
Metazoa - 16; Fungi - 18; Plants - 121; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.6 0.3 -0.34
19 AT5G56880 unknown protein; Has 9 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.3
20 AT2G06220 transposable element gene -0.59 0.31 -0.3
21 AT1G47410 unknown protein; Has 26 Blast hits to 26 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.32 -0.32
22 AT3G21380 Mannose-binding lectin superfamily protein -0.59 0.31 -0.33
23 AT2G23230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.59 0.31 -0.31
24 AT5G60410 DNA-binding protein with MIZ/SP-RING zinc finger,
PHD-finger and SAP domain		 ATSIZ1, SIZ1 -0.58 0.31 -0.32
25 AT4G21700 Protein of unknown function (DUF2921) -0.58 0.3 -0.3
26 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 0.58 0.31 -0.33
27 AT2G35480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G32260.1); Has 47 Blast
hits to 47 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.33
28 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 -0.57 0.34 -0.3
29 AT1G65350 ubiquitin 13 ubiquitin 13 -0.57 0.31 -0.32
30 AT2G03840 tetraspanin13 tetraspanin13 -0.56 0.31 -0.34
31 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 -0.56 0.31 -0.32
32 AT3G24050 GATA transcription factor 1 GATA transcription factor 1 -0.56 0.34 -0.32
33 AT5G01980 RING/U-box superfamily protein -0.55 0.32 -0.3
34 AT1G43840 transposable element gene -0.55 0.31 -0.32
35 AT4G29980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: leaf whorl, sepal, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; BEST Arabidopsis
thaliana protein match is: Fasciclin-like arabinogalactan
family protein (TAIR:AT1G30800.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.55 0.31 -0.3
36 AT1G53910 related to AP2 12 related to AP2 12 -0.55 0.3 -0.3
37 AT3G43320 transposable element gene -0.55 0.32 -0.33
38 AT4G00150 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 3, HAIRY MERISTEM 3, LOST
MERISTEMS 3		 -0.54 0.33 -0.33
39 AT2G15060 transposable element gene -0.54 0.28 -0.32
40 AT3G45110 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.32 -0.32
41 AT5G41660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G44430.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.53 0.31 -0.32
42 AT3G03020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.3 -0.33
43 AT3G25650 SKP1-like 15 SKP1-like 15, SKP1-like 15 -0.53 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
44 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		-0.73 0.44 -0.47 C0001
45 C0074 Cystine L-Cystine L-Cystine protein precursor -0.72 0.46 -0.45 C0074
46 C0170 MST_2128.3 - - - 0.72 0.48 -0.45
47 C0144 Maltose D-Maltose α-Maltose starch degradation II -0.68 0.45 -0.46 C0144
48 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		-0.68 0.43 -0.43 C0012