AGICode | AT1G05880 |
Description | RING/U-box superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G05880 | RING/U-box superfamily protein | ARIADNE 12, ARABIDOPSIS ARIADNE 12 | 1 | 0.32 | -0.31 | ||
2 | AT1G60380 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
0.73 | 0.32 | -0.31 | |||
3 | AT1G22010 | unknown protein; Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.32 | -0.32 | |||
4 | ATMG01410 | open reading frame 204 | open reading frame 204 | 0.7 | 0.32 | -0.31 | ||
5 | AT3G43420 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.33 | -0.3 | |||
6 | AT1G23690 | Domain of unknown function DUF220 | 0.68 | 0.32 | -0.32 | |||
7 | AT3G19070 | Homeodomain-like superfamily protein | -0.68 | 0.31 | -0.34 | |||
8 | AT4G28740 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.67 | 0.3 | -0.31 | |||
9 | AT1G36810 | transposable element gene | 0.67 | 0.33 | -0.32 | |||
10 | AT5G23330 | Nucleotidylyl transferase superfamily protein | 0.65 | 0.33 | -0.32 | |||
11 | AT4G08000 | transposable element gene | 0.65 | 0.33 | -0.32 | |||
12 | ATCG00190 | RNA polymerase subunit beta | RNA polymerase subunit beta | 0.64 | 0.32 | -0.3 | ||
13 | AT4G05240 | Ubiquitin-like superfamily protein | -0.63 | 0.29 | -0.31 | |||
14 | AT4G26930 | myb domain protein 97 | myb domain protein 97, myb domain protein 97 |
0.63 | 0.33 | -0.32 | ||
15 | AT2G02830 | transposable element gene | -0.63 | 0.32 | -0.31 | |||
16 | AT2G36920 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.32 | -0.31 | |||
17 | AT3G19330 | Protein of unknown function (DUF677) | 0.62 | 0.32 | -0.34 | |||
18 | AT3G30370 | CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein (TAIR:AT1G18050.1); Has 35 Blast hits to 35 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.32 | -0.32 | |||
19 | AT3G52030 | F-box family protein with WD40/YVTN repeat doamin | 0.61 | 0.31 | -0.3 | |||
20 | AT1G11970 | Ubiquitin-like superfamily protein | 0.61 | 0.32 | -0.31 | |||
21 | AT1G31620 | unknown protein; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.34 | -0.33 | |||
22 | AT4G18720 | Transcription factor IIS protein | 0.6 | 0.3 | -0.29 | |||
23 | AT1G77130 | plant glycogenin-like starch initiation protein 2 | glucuronic acid substitution of xylan 3, plant glycogenin-like starch initiation protein 2 |
-0.6 | 0.3 | -0.31 | ||
24 | AT1G71692 | AGAMOUS-like 12 | AGAMOUS-like 12, XAANTAL1 | -0.6 | 0.3 | -0.33 | ||
25 | AT2G42180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.59 | 0.32 | -0.29 | |||
26 | AT4G07920 | transposable element gene | 0.59 | 0.29 | -0.3 | |||
27 | AT2G05010 | transposable element gene | 0.59 | 0.31 | -0.32 | |||
28 | AT5G26630 | MADS-box transcription factor family protein | 0.58 | 0.32 | -0.31 | |||
29 | AT1G51880 | root hair specific 6 | root hair specific 6 | 0.58 | 0.31 | -0.32 | ||
30 | AT3G14250 | RING/U-box superfamily protein | -0.58 | 0.31 | -0.3 | |||
31 | AT2G16910 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
ABORTED MICROSPORES | 0.57 | 0.32 | -0.31 | ||
32 | AT2G24920 | transposable element gene | 0.57 | 0.32 | -0.32 | |||
33 | AT1G77790 | Glycosyl hydrolase superfamily protein | 0.57 | 0.31 | -0.3 | |||
34 | AT3G16857 | response regulator 1 | response regulator 1, response regulator 1 |
-0.57 | 0.32 | -0.31 | ||
35 | AT3G62180 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.57 | 0.33 | -0.3 | |||
36 | AT1G80740 | chromomethylase 1 | chromomethylase 1, DNA METHYLTRANSFERASE 4 |
0.57 | 0.33 | -0.33 | ||
37 | AT2G14670 | sucrose-proton symporter 8 | sucrose-proton symporter 8, sucrose-proton symporter 8 |
0.56 | 0.33 | -0.29 | ||
38 | AT2G17580 | Polynucleotide adenylyltransferase family protein | -0.56 | 0.32 | -0.3 | |||
39 | AT5G24910 | cytochrome P450, family 714, subfamily A, polypeptide 1 | cytochrome P450, family 714, subfamily A, polypeptide 1, EUI-like p450 A1 |
-0.56 | 0.32 | -0.29 | ||
40 | AT1G67670 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24405.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.32 | -0.34 | |||
41 | AT1G69120 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 7, APETALA1 | -0.56 | 0.3 | -0.3 | ||
42 | AT2G16340 | unknown protein; Has 64 Blast hits to 48 proteins in 21 species: Archae - 2; Bacteria - 36; Metazoa - 11; Fungi - 6; Plants - 3; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.56 | 0.33 | -0.3 | |||
43 | AT2G17610 | transposable element gene | -0.56 | 0.29 | -0.32 | |||
44 | AT3G21660 | UBX domain-containing protein | 0.56 | 0.32 | -0.31 | |||
45 | AT3G13220 | ABC-2 type transporter family protein | ATP-binding cassette G26, AtABCG26, MSR02, WBC27 |
-0.56 | 0.31 | -0.3 | ||
46 | AT3G27510 | Cysteine/Histidine-rich C1 domain family protein | -0.56 | 0.31 | -0.32 | |||
47 | AT3G62080 | SNF7 family protein | 0.56 | 0.33 | -0.31 | |||
48 | AT2G40310 | Pectin lyase-like superfamily protein | 0.56 | 0.34 | -0.32 | |||
49 | AT5G05350 | PLAC8 family protein | 0.55 | 0.32 | -0.3 | |||
50 | AT1G67220 | histone acetyltransferase of the CBP family 2 | ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 1, HAC02, histone acetyltransferase of the CBP family 2 |
-0.55 | 0.31 | -0.33 | ||
51 | ATCG00330 | chloroplast ribosomal protein S14 | chloroplast ribosomal protein S14 | 0.55 | 0.29 | -0.3 | ||
52 | AT4G02195 | syntaxin of plants 42 | ATSYP42, ATTLG2B, syntaxin of plants 42, TLG2B |
0.55 | 0.28 | -0.33 | ||
53 | AT2G18610 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.33 | -0.34 | |||
54 | AT2G37070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes - 556 (source: NCBI BLink). |
0.55 | 0.3 | -0.29 | |||
55 | AT5G55550 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.55 | 0.31 | -0.32 | |||
56 | AT5G34880 | transposable element gene | -0.55 | 0.31 | -0.31 | |||
57 | AT4G15030 | CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink). |
0.55 | 0.32 | -0.33 | |||
58 | AT2G26420 | 1-phosphatidylinositol-4-phosphate 5-kinase 3 | 1-phosphatidylinositol-4-phosphate 5-kinase 3 |
0.55 | 0.34 | -0.29 | ||
59 | ATMG00450 | hypothetical protein | ORF106B | 0.54 | 0.33 | -0.33 | ||
60 | AT1G12960 | Ribosomal protein L18e/L15 superfamily protein | 0.54 | 0.3 | -0.3 | |||
61 | AT3G45320 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60330.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.33 | -0.31 | |||
62 | AT1G07705 | NOT2 / NOT3 / NOT5 family | -0.54 | 0.32 | -0.31 | |||
63 | AT1G58450 | Tetratricopeptide repeat (TPR)-like superfamily protein | tetratricopeptide repeat 6 | 0.54 | 0.3 | -0.3 | ||
64 | AT1G55060 | ubiquitin 12 | ubiquitin 12 | -0.54 | 0.3 | -0.31 | ||
65 | AT2G32770 | purple acid phosphatase 13 | PURPLE ACID PHOSPHATASE 13, purple acid phosphatase 13 |
0.54 | 0.32 | -0.32 | ||
66 | AT5G66670 | Protein of unknown function (DUF677) | 0.54 | 0.32 | -0.31 | |||
67 | AT5G56070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.54 | 0.31 | -0.32 | |||
68 | AT1G35647 | transposable element gene | 0.54 | 0.3 | -0.34 | |||
69 | AT3G03880 | Protein of unknown function (DUF1639) | 0.54 | 0.31 | -0.31 | |||
70 | AT1G17040 | SH2 domain protein A | ARABIDOPSIS THALIANA SH2 DOMAIN PROTEIN A, SH2 domain protein A, STAT-TYPE LINKER-SH2 DOMAIN FACTOR A |
0.54 | 0.35 | -0.31 | ||
71 | AT3G28720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink). |
-0.54 | 0.32 | -0.33 | |||
72 | AT4G16820 | alpha/beta-Hydrolases superfamily protein | phospholipase A I beta 2 | 0.53 | 0.32 | -0.32 | ||
73 | AT3G21590 | Senescence/dehydration-associated protein-related | 0.53 | 0.32 | -0.32 | |||
74 | AT4G38190 | cellulose synthase like D4 | ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE D4, cellulose synthase like D4 |
-0.53 | 0.32 | -0.3 | ||
75 | AT2G07760 | Zinc knuckle (CCHC-type) family protein | -0.53 | 0.31 | -0.31 | |||
76 | AT4G15350 | cytochrome P450, family 705, subfamily A, polypeptide 2 | cytochrome P450, family 705, subfamily A, polypeptide 2 |
-0.53 | 0.31 | -0.3 | ||
77 | AT1G28327 | unknown protein; Has 52 Blast hits to 52 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.31 | -0.3 | |||
78 | AT5G22960 | alpha/beta-Hydrolases superfamily protein | -0.53 | 0.32 | -0.33 | |||
79 | AT1G05670 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.53 | 0.31 | -0.31 | |||
80 | AT2G23470 | Protein of unknown function, DUF647 | ROOT UV-B SENSITIVE 4 | 0.53 | 0.31 | -0.31 | ||
81 | AT5G11430 | SPOC domain / Transcription elongation factor S-II protein | -0.53 | 0.31 | -0.3 | |||
82 | AT1G74550 | cytochrome P450, family 98, subfamily A, polypeptide 9 | cytochrome P450, family 98, subfamily A, polypeptide 9 |
-0.53 | 0.32 | -0.31 | ||
83 | AT1G40150 | transposable element gene | 0.53 | 0.35 | -0.32 | |||
84 | AT3G18770 | Autophagy-related protein 13 | -0.52 | 0.32 | -0.3 | |||
85 | AT5G45560 | Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein |
0.52 | 0.31 | -0.31 | |||
86 | AT2G06310 | transposable element gene | 0.52 | 0.31 | -0.32 | |||
87 | AT4G18180 | Pectin lyase-like superfamily protein | -0.52 | 0.31 | -0.33 | |||
88 | AT3G44080 | F-box family protein | 0.52 | 0.32 | -0.3 | |||
89 | AT3G30560 | transposable element gene | 0.52 | 0.32 | -0.31 | |||
90 | AT1G50960 | gibberellin 2-oxidase 7 | ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 7, gibberellin 2-oxidase 7 |
0.52 | 0.32 | -0.32 | ||
91 | AT3G47140 | F-box associated ubiquitination effector family protein | 0.52 | 0.31 | -0.31 | |||
92 | AT2G15340 | glycine-rich protein | -0.52 | 0.31 | -0.32 | |||
93 | AT5G37520 | Protein of Unknown Function (DUF239) | 0.52 | 0.34 | -0.33 | |||
94 | AT2G17310 | F-box and associated interaction domains-containing protein | SUPPRESSOR OF NIM1-1 1 | 0.52 | 0.32 | -0.32 | ||
95 | AT4G00020 | BREAST CANCER 2 like 2A | BREAST CANCER 2 like 2A, BRCA2A, EMBRYO SAC DEVELOPMENT ARREST 20, MATERNAL EFFECT EMBRYO ARREST 43 |
0.51 | 0.29 | -0.32 | ||
96 | AT3G42990 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.51 | 0.35 | -0.32 | |||
97 | AT2G39590 | Ribosomal protein S8 family protein | 0.51 | 0.3 | -0.3 | |||
98 | AT4G31070 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.51 | 0.31 | -0.32 | |||
99 | AT2G25340 | vesicle-associated membrane protein 712 | vesicle-associated membrane protein 712, VAMP712, vesicle-associated membrane protein 712 |
0.51 | 0.32 | -0.32 | ||
100 | AT1G33830 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.51 | 0.31 | -0.31 | |||
101 | AT4G21630 | Subtilase family protein | -0.51 | 0.32 | -0.32 | |||
102 | AT1G06140 | Pentatricopeptide repeat (PPR) superfamily protein | mitochondrial editing factor 3 | -0.51 | 0.32 | -0.3 | ||
103 | AT2G41570 | transposable element gene | 0.51 | 0.3 | -0.31 | |||
104 | AT5G46040 | Major facilitator superfamily protein | -0.5 | 0.31 | -0.3 | |||
105 | AT3G29265 | transposable element gene | -0.5 | 0.31 | -0.33 | |||
106 | AT3G17220 | pectin methylesterase inhibitor 2 | ATPMEI2, pectin methylesterase inhibitor 2 |
-0.5 | 0.32 | -0.31 | ||
107 | AT4G04280 | transposable element gene | -0.5 | 0.31 | -0.34 | |||
108 | AT4G20270 | Leucine-rich receptor-like protein kinase family protein | BARELY ANY MERISTEM 3 | -0.5 | 0.33 | -0.34 | ||
109 | AT4G11340 | Disease resistance protein (TIR-NBS-LRR class) family | -0.5 | 0.32 | -0.31 | |||
110 | AT2G28755 | UDP-D-glucuronate carboxy-lyase-related | -0.5 | 0.32 | -0.32 | |||
111 | AT4G11480 | cysteine-rich RLK (RECEPTOR-like protein kinase) 32 | cysteine-rich RLK (RECEPTOR-like protein kinase) 32 |
-0.49 | 0.31 | -0.32 | ||
112 | AT3G04990 | BEST Arabidopsis thaliana protein match is: Frigida-like protein (TAIR:AT5G27220.1); Has 30900 Blast hits to 17560 proteins in 1427 species: Archae - 757; Bacteria - 4112; Metazoa - 14311; Fungi - 2221; Plants - 1348; Viruses - 71; Other Eukaryotes - 8080 (source: NCBI BLink). |
-0.49 | 0.31 | -0.33 | |||
113 | AT3G21170 | F-box and associated interaction domains-containing protein | -0.49 | 0.32 | -0.35 |