AT1G36990 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G36990
Description unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 1 0.3 -0.31
2 AT1G26370 RNA helicase family protein 0.81 0.3 -0.3
3 AT2G36480 ENTH/VHS family protein 0.81 0.31 -0.33
4 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.79 0.31 -0.29
5 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.77 0.32 -0.32
6 AT1G22660 Polynucleotide adenylyltransferase family protein 0.76 0.3 -0.32
7 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.75 0.33 -0.29
8 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.75 0.34 -0.31
9 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 0.74 0.32 -0.31
10 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.31 -0.33
11 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.73 0.33 -0.33
12 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.33 -0.32
13 AT2G23360 Plant protein of unknown function (DUF869) 0.73 0.32 -0.34
14 AT5G66130 RADIATION SENSITIVE 17 RADIATION SENSITIVE 17, RADIATION
SENSITIVE 17		 0.73 0.3 -0.31
15 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.72 0.31 -0.32
16 AT1G69120 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 7, APETALA1 0.72 0.31 -0.33
17 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.72 0.32 -0.3
18 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.32 -0.32
19 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.71 0.35 -0.3
20 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 0.71 0.34 -0.3
21 AT3G44530 homolog of histone chaperone HIRA homolog of histone chaperone HIRA 0.71 0.34 -0.3
22 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.71 0.3 -0.33
23 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 -0.7 0.31 -0.3
24 AT2G26210 Ankyrin repeat family protein -0.7 0.31 -0.32
25 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.33 -0.33
26 AT1G33250 Protein of unknown function (DUF604) 0.7 0.31 -0.31
27 AT2G11360 transposable element gene 0.69 0.31 -0.3
28 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 -0.69 0.34 -0.31
29 AT2G47160 HCO3- transporter family AtBOR1, REQUIRES HIGH BORON 1 0.69 0.34 -0.31
30 AT5G05320 FAD/NAD(P)-binding oxidoreductase family protein 0.69 0.34 -0.33
31 AT5G47420 Tryptophan RNA-binding attenuator protein-like -0.69 0.31 -0.32
32 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 -0.69 0.29 -0.3
33 AT1G74820 RmlC-like cupins superfamily protein 0.69 0.33 -0.32
34 AT4G25720 glutaminyl cyclase ARABIDOPSIS THALIANA GLUTAMINYL
CYCLASE, glutaminyl cyclase,
GLUTAMINYL CYCLOTRANSFERASE		 -0.69 0.31 -0.31
35 AT3G43120 SAUR-like auxin-responsive protein family 0.69 0.31 -0.32
36 AT1G63850 BTB/POZ domain-containing protein 0.68 0.3 -0.32
37 AT1G32030 Domain of unknown function (DUF313) 0.68 0.32 -0.31
38 AT1G35330 RING/U-box superfamily protein -0.68 0.32 -0.31
39 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 -0.68 0.32 -0.29
40 AT5G20200 nucleoporin-related 0.68 0.34 -0.31
41 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.29 -0.34
42 AT1G55820 Kinase-related protein of unknown function (DUF1296) 0.68 0.3 -0.31
43 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.68 0.32 -0.3
44 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.31 -0.31
45 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.67 0.32 -0.32
46 AT1G80420 BRCT domain-containing DNA repair protein ATXRCC1 -0.67 0.31 -0.31
47 AT2G17580 Polynucleotide adenylyltransferase family protein 0.67 0.32 -0.31
48 AT2G40600 appr-1-p processing enzyme family protein -0.67 0.32 -0.31
49 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.31 -0.31
50 AT5G24540 beta glucosidase 31 beta glucosidase 31 -0.67 0.31 -0.32
51 AT3G14950 tetratricopetide-repeat thioredoxin-like 2 tetratricopetide-repeat
thioredoxin-like 2		 -0.67 0.31 -0.29
52 AT2G21710 Mitochondrial transcription termination factor family
protein		 embryo defective 2219 0.66 0.3 -0.32
53 AT5G38500 Domain of unknown function (DUF313) 0.66 0.31 -0.31
54 AT4G19045 Mob1/phocein family protein -0.66 0.3 -0.33
55 AT2G05120 Nucleoporin, Nup133/Nup155-like 0.66 0.31 -0.31
56 AT3G47700 RINT-1 / TIP-1 family maigo2 -0.66 0.3 -0.34
57 AT5G39960 GTP binding;GTP binding 0.66 0.3 -0.31
58 AT1G05910 cell division cycle protein 48-related / CDC48-related 0.66 0.3 -0.32
59 AT2G15130 Plant basic secretory protein (BSP) family protein 0.66 0.3 -0.33
60 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.31 -0.31
61 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 0.66 0.3 -0.3
62 AT1G14850 nucleoporin 155 nucleoporin 155 0.65 0.33 -0.33
63 AT1G63670 Protein of unknown function (DUF3741) 0.65 0.32 -0.34
64 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein -0.65 0.32 -0.32
65 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 0.65 0.32 -0.33
66 AT4G38170 FAR1-related sequence 9 FAR1-related sequence 9 0.65 0.32 -0.31
67 AT4G26830 O-Glycosyl hydrolases family 17 protein 0.65 0.33 -0.31
68 AT5G22950 SNF7 family protein VPS24.1 -0.65 0.31 -0.32
69 AT1G48120 hydrolases;protein serine/threonine phosphatases 0.65 0.3 -0.31
70 AT3G44740 Class II aaRS and biotin synthetases superfamily protein 0.65 0.32 -0.31
71 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.65 0.31 -0.31
72 AT1G44980 pectin methylesterase 7 A. THALIANA PECTIN METHYLESTERASE
7, pectin methylesterase 7		 0.65 0.29 -0.32
73 AT1G34160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.3 -0.32
74 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.65 0.33 -0.3
75 AT4G15415 Protein phosphatase 2A regulatory B subunit family protein ATB' GAMMA 0.65 0.32 -0.32
76 AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein -0.65 0.3 -0.31
77 AT5G01440 BEST Arabidopsis thaliana protein match is: Insulinase
(Peptidase family M16) family protein (TAIR:AT1G06900.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.65 0.33 -0.32
78 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO 0.64 0.31 -0.32
79 AT4G25040 Uncharacterised protein family (UPF0497) 0.64 0.32 -0.31
80 AT3G13400 SKU5 similar 13 SKU5 similar 13 0.64 0.31 -0.32
81 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.64 0.31 -0.3
82 AT1G06630 F-box/RNI-like superfamily protein -0.64 0.31 -0.32
83 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.64 0.33 -0.3
84 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.64 0.32 -0.31
85 AT5G08550 GC-rich sequence DNA-binding factor-like protein increased level of polyploidy1-1D 0.64 0.33 -0.32
86 AT4G24200 Transcription elongation factor (TFIIS) family protein 0.64 0.31 -0.3
87 AT5G15400 U-box domain-containing protein 0.64 0.33 -0.31
88 AT3G63080 glutathione peroxidase 5 glutathione peroxidase 5,
glutathione peroxidase 5, maternal
effect embryo arrest 42		 -0.63 0.33 -0.3
89 AT2G28940 Protein kinase superfamily protein -0.63 0.33 -0.33
90 AT3G18770 Autophagy-related protein 13 0.63 0.31 -0.31
91 AT5G65710 HAESA-like 2 HAESA-like 2 0.63 0.31 -0.31
92 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 -0.63 0.32 -0.31
93 AT1G03960 Calcium-binding EF hand family protein 0.63 0.3 -0.31
94 AT5G28410 unknown protein; Has 8 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.33 -0.3
95 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 0.63 0.32 -0.33
96 AT5G44530 Subtilase family protein 0.63 0.35 -0.31
97 AT1G63470 AT hook motif DNA-binding family protein 0.63 0.32 -0.33
98 AT4G02710 Kinase interacting (KIP1-like) family protein 0.63 0.33 -0.32
99 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein 0.63 0.32 -0.32
100 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.3 -0.31
101 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 0.63 0.31 -0.33
102 AT5G45400 Replication factor-A protein 1-related ATRPA70C, RPA70C 0.63 0.3 -0.3
103 AT2G20050 protein serine/threonine phosphatases;protein
kinases;catalytics;cAMP-dependent protein kinase
regulators;ATP binding;protein serine/threonine
phosphatases		 0.63 0.29 -0.34
104 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 0.63 0.33 -0.3
105 AT5G51280 DEAD-box protein abstrakt, putative 0.63 0.31 -0.31
106 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 0.63 0.33 -0.31
107 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 -0.63 0.32 -0.32
108 AT5G47280 ADR1-like 3 ADR1-like 3 0.63 0.33 -0.33
109 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.33 -0.29
110 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.31
111 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.63 0.3 -0.32
112 AT4G14600 Target SNARE coiled-coil domain protein -0.62 0.31 -0.32
113 AT5G67290 FAD-dependent oxidoreductase family protein -0.62 0.34 -0.34
114 AT1G47330 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.62 0.32 -0.32
115 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.62 0.31 -0.3
116 AT3G43530 transposable element gene -0.62 0.3 -0.31
117 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.62 0.31 -0.31
118 AT1G53060 Legume lectin family protein -0.62 0.32 -0.31
119 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 -0.61 0.31 -0.31
120 AT3G42400 transposable element gene -0.61 0.31 -0.32
121 AT1G75290 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.34 -0.3
122 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.61 0.28 -0.31
123 AT3G50210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.32 -0.31
124 AT5G26990 Drought-responsive family protein -0.6 0.32 -0.33
125 AT5G52120 phloem protein 2-A14 phloem protein 2-A14, phloem
protein 2-A14		 -0.6 0.31 -0.32
126 AT1G54850 HSP20-like chaperones superfamily protein -0.6 0.33 -0.31
127 AT3G52760 Integral membrane Yip1 family protein -0.6 0.33 -0.32
128 AT1G65000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits
to 49 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.34 -0.32
129 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 -0.6 0.32 -0.32
130 AT5G35920 cytochrome P450, family 79, subfamily A, polypeptide 4
pseudogene		 cytochrome P450, family 79,
subfamily A, polypeptide 4
pseudogene		 -0.6 0.32 -0.31
131 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.32 -0.32
132 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.32 -0.32
133 AT1G68000 phosphatidylinositol synthase 1 PHOSPHATIDYLINOSITOL SYNTHASE,
phosphatidylinositol synthase 1,
phosphatidylinositol synthase 1		 -0.58 0.31 -0.3
134 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 -0.58 0.33 -0.29
135 AT5G13070 MSF1-like family protein -0.58 0.28 -0.32
136 AT5G44880 transposable element gene -0.58 0.3 -0.32
137 AT3G20090 cytochrome P450, family 705, subfamily A, polypeptide 18 cytochrome P450, family 705,
subfamily A, polypeptide 18		 -0.57 0.31 -0.32
138 ATMG00450 hypothetical protein ORF106B -0.57 0.32 -0.34
139 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 -0.57 0.28 -0.32
140 AT3G13845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.34 -0.31
141 AT2G20620 Protein of unknown function (DUF626) -0.57 0.29 -0.34
142 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.57 0.3 -0.29
143 AT2G24880 Plant self-incompatibility protein S1 family -0.57 0.32 -0.31
144 AT5G04740 ACT domain-containing protein ACT domain repeats 12 -0.56 0.31 -0.31
145 AT2G04000 transposable element gene -0.56 0.32 -0.29
146 AT1G28327 unknown protein; Has 52 Blast hits to 52 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.3 -0.33
147 AT5G46760 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC3 -0.56 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
148 C0145 Maltotetraose - Maltotetraose starch degradation II 0.74 0.45 -0.45 C0145
149 C0214 PR_MST_2412.1 - - - 0.64 0.4 -0.43
150 C0213 PR_MST_2410.2 - - - 0.63 0.45 -0.42