AT1G48460 : -
Query Information
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AGICode AT1G48460
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.31 -0.31
2 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.93 0.3 -0.3
3 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.91 0.3 -0.31
4 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.91 0.32 -0.32
5 AT1G56050 GTP-binding protein-related 0.9 0.32 -0.3
6 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.29 -0.32
7 AT4G26370 antitermination NusB domain-containing protein 0.9 0.33 -0.33
8 AT2G14880 SWIB/MDM2 domain superfamily protein 0.9 0.29 -0.33
9 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.9 0.3 -0.31
10 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.89 0.31 -0.32
11 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.89 0.32 -0.32
12 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.89 0.32 -0.29
13 AT3G21300 RNA methyltransferase family protein 0.89 0.33 -0.33
14 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.89 0.31 -0.28
15 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.88 0.33 -0.31
16 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 0.88 0.31 -0.32
17 AT2G39670 Radical SAM superfamily protein 0.88 0.34 -0.32
18 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.88 0.34 -0.32
19 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.88 0.32 -0.33
20 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.88 0.32 -0.3
21 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.88 0.32 -0.31
22 AT4G25990 CCT motif family protein CIL 0.88 0.34 -0.32
23 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.88 0.33 -0.33
24 AT5G10910 mraW methylase family protein 0.87 0.32 -0.32
25 AT4G34290 SWIB/MDM2 domain superfamily protein 0.87 0.32 -0.33
26 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.87 0.34 -0.3
27 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.87 0.29 -0.34
28 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.86 0.32 -0.33
29 AT1G18090 5'-3' exonuclease family protein 0.86 0.31 -0.32
30 AT1G10522 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 24 Blast hits to 24 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.86 0.32 -0.3
31 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.86 0.33 -0.33
32 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.29 -0.3
33 AT1G21600 plastid transcriptionally active 6 plastid transcriptionally active 6 0.86 0.3 -0.32
34 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.86 0.32 -0.33
35 AT3G03710 polyribonucleotide nucleotidyltransferase, putative PIGMENT DEFECTIVE 326,
POLYNUCLEOTIDE PHOSPHORYLASE,
resistant to inhibition with FSM
10		 0.85 0.32 -0.33
36 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.85 0.33 -0.33
37 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.31 -0.31
38 AT2G36230 Aldolase-type TIM barrel family protein ALBINO AND PALE GREEN 10, HISN3 0.85 0.31 -0.3
39 AT5G23070 Thymidine kinase 0.85 0.32 -0.3
40 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.85 0.3 -0.33
41 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein 0.85 0.33 -0.32
42 AT5G63050 embryo defective 2759 embryo defective 2759 0.85 0.32 -0.31
43 AT5G39980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.85 0.33 -0.32
44 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 0.84 0.33 -0.32
45 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.84 0.29 -0.32
46 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.84 0.31 -0.33
47 AT1G09200 Histone superfamily protein 0.84 0.32 -0.3
48 AT5G48220 Aldolase-type TIM barrel family protein 0.84 0.31 -0.32
49 AT4G39120 myo-inositol monophosphatase like 2 HISTIDINE BIOSYNTHESIS 7,
myo-inositol monophosphatase like
2		 0.84 0.3 -0.31
50 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.84 0.34 -0.3
51 AT5G50280 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1006 0.84 0.31 -0.31
52 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 0.84 0.34 -0.33
53 AT3G51870 Mitochondrial substrate carrier family protein 0.84 0.32 -0.32
54 AT2G02740 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 3, PLASTID
TRANSCRIPTIONALLY ACTIVE11, WHIRLY
3		 0.84 0.31 -0.31
55 AT3G28040 Leucine-rich receptor-like protein kinase family protein 0.83 0.31 -0.32
56 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.83 0.32 -0.34
57 AT1G34380 5'-3' exonuclease family protein 0.83 0.32 -0.29
58 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.83 0.31 -0.32
59 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.83 0.31 -0.32
60 AT1G73090 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.33 -0.33
61 AT4G28310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.82 0.3 -0.32
62 AT1G80770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 pigment defective 318 0.82 0.35 -0.31
63 AT2G04270 RNAse E/G-like RNAse E/G-like 0.82 0.3 -0.31
64 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.82 0.3 -0.31
65 AT3G56330 N2,N2-dimethylguanosine tRNA methyltransferase 0.82 0.32 -0.31
66 AT5G42480 Chaperone DnaJ-domain superfamily protein ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 6		 0.82 0.32 -0.34
67 AT3G42660 transducin family protein / WD-40 repeat family protein 0.82 0.31 -0.33
68 AT4G30720 FAD/NAD(P)-binding oxidoreductase family protein PIGMENT DEFECTIVE 327 0.82 0.33 -0.3
69 AT4G26670 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.82 0.31 -0.32
70 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.82 0.31 -0.31
71 AT1G51080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 11 growth stages; Has 101 Blast hits to 98 proteins
in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38;
Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.82 0.31 -0.28
72 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.82 0.3 -0.31
73 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.82 0.3 -0.33
74 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 -0.81 0.32 -0.32
75 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.8 0.34 -0.31
76 AT5G57910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.79 0.31 -0.32
77 AT5G06750 Protein phosphatase 2C family protein -0.79 0.33 -0.32
78 AT2G48010 receptor-like kinase in in flowers 3 receptor-like kinase in in flowers
3		 -0.78 0.31 -0.3
79 AT4G29950 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.78 0.32 -0.3
80 AT3G28850 Glutaredoxin family protein -0.78 0.3 -0.33
81 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.75 0.33 -0.32
82 AT1G63460 glutathione peroxidase 8 ATGPX8, glutathione peroxidase 8 -0.75 0.31 -0.34
83 AT1G01720 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 2, ATAF1		 -0.75 0.31 -0.31
84 AT1G78280 transferases, transferring glycosyl groups -0.73 0.31 -0.3
85 AT5G17650 glycine/proline-rich protein -0.73 0.34 -0.31
86 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.3 -0.32
87 AT5G40690 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site
(InterPro:IPR018247); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41730.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.72 0.3 -0.31
88 AT3G11100 sequence-specific DNA binding transcription factors -0.72 0.29 -0.32
89 AT4G22820 A20/AN1-like zinc finger family protein -0.72 0.31 -0.32
90 AT2G32830 phosphate transporter 1;5 phosphate transporter 1;5,
PHOSPHATE TRANSPORTER 5		 -0.72 0.32 -0.31
91 AT3G49350 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.7 0.31 -0.31
92 AT2G43060 ILI1 binding bHLH 1 ILI1 binding bHLH 1 -0.7 0.29 -0.32
93 AT3G04560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 16 growth stages; Has
227 Blast hits to 225 proteins in 83 species: Archae - 0;
Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51;
Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink).		 -0.7 0.29 -0.31
94 AT4G34390 extra-large GTP-binding protein 2 extra-large GTP-binding protein 2 -0.69 0.29 -0.32