AT1G05750 : CLB19
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G05750
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 1 0.3 -0.3
2 AT1G20280 homeobox-leucine zipper protein-related 0.78 0.33 -0.34
3 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 -0.76 0.32 -0.31
4 AT4G07960 Cellulose-synthase-like C12 Cellulose-synthase-like C12,
CELLULOSE-SYNTHASE LIKE C12,
Cellulose-synthase-like C12		 0.76 0.32 -0.33
5 AT2G31100 alpha/beta-Hydrolases superfamily protein 0.74 0.31 -0.32
6 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein 0.74 0.32 -0.31
7 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.3 -0.31
8 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.74 0.32 -0.3
9 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 0.73 0.33 -0.31
10 AT2G28680 RmlC-like cupins superfamily protein 0.73 0.32 -0.32
11 AT2G45080 cyclin p3;1 cyclin p3;1 0.73 0.3 -0.33
12 AT2G42450 alpha/beta-Hydrolases superfamily protein 0.73 0.34 -0.32
13 AT1G69330 RING/U-box superfamily protein 0.73 0.31 -0.31
14 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein 0.73 0.32 -0.3
15 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 -0.72 0.31 -0.31
16 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family 0.71 0.31 -0.32
17 AT3G22750 Protein kinase superfamily protein 0.71 0.35 -0.33
18 AT1G20850 xylem cysteine peptidase 2 xylem cysteine peptidase 2 -0.71 0.31 -0.3
19 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 0.71 0.33 -0.32
20 AT5G36950 DegP protease 10 DegP protease 10 0.71 0.3 -0.33
21 AT5G06810 Mitochondrial transcription termination factor family
protein		 0.71 0.31 -0.32
22 AT5G17140 Cysteine proteinases superfamily protein 0.71 0.34 -0.33
23 AT1G14200 RING/U-box superfamily protein -0.71 0.32 -0.35
24 AT3G59490 unknown protein; Has 30 Blast hits to 30 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.7 0.31 -0.31
25 AT5G59050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.7 0.31 -0.32
26 AT3G20730 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.33 -0.3
27 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.7 0.3 -0.34
28 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 -0.7 0.31 -0.31
29 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.33 -0.3
30 AT5G64050 glutamate tRNA synthetase ATERS, glutamate tRNA synthetase,
OVULE ABORTION 3		 0.69 0.32 -0.31
31 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 0.69 0.34 -0.31
32 AT5G27220 Frigida-like protein 0.69 0.33 -0.33
33 AT2G44260 Plant protein of unknown function (DUF946) -0.69 0.34 -0.33
34 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.69 0.32 -0.31
35 AT4G23780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23770.1); Has 51 Blast hits
to 49 proteins in 22 species: Archae - 0; Bacteria - 9;
Metazoa - 12; Fungi - 0; Plants - 14; Viruses - 2; Other
Eukaryotes - 14 (source: NCBI BLink).		 -0.69 0.33 -0.32
36 AT5G52860 ABC-2 type transporter family protein ATP-binding cassette G8 0.69 0.33 -0.32
37 AT4G20235 cytochrome P450, family 71, subfamily A, polypeptide 28 cytochrome P450, family 71,
subfamily A, polypeptide 28		 0.69 0.32 -0.34
38 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.32 -0.32
39 AT2G37160 Transducin/WD40 repeat-like superfamily protein 0.68 0.3 -0.33
40 AT4G14460 transposable element gene 0.68 0.31 -0.31
41 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.34
42 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.68 0.32 -0.3
43 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 0.68 0.31 -0.32
44 AT1G76400 Ribophorin I 0.68 0.33 -0.33
45 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.34 -0.32
46 AT2G29780 Galactose oxidase/kelch repeat superfamily protein 0.68 0.32 -0.32
47 AT2G44230 Plant protein of unknown function (DUF946) -0.67 0.3 -0.31
48 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 0.67 0.31 -0.34
49 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6		 -0.67 0.33 -0.33
50 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 0.67 0.32 -0.31
51 AT1G21710 8-oxoguanine-DNA glycosylase 1 ARABIDOPSIS 8-OXOGUANINE-DNA
GLYCOSYLASE 1, 8-oxoguanine-DNA
glycosylase 1		 0.67 0.31 -0.3
52 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.67 0.32 -0.31
53 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.67 0.31 -0.31
54 AT5G38260 Protein kinase superfamily protein 0.67 0.33 -0.32
55 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 0.67 0.32 -0.32
56 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 -0.67 0.31 -0.32
57 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.66 0.3 -0.31
58 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO 0.66 0.33 -0.34
59 AT5G66160 receptor homology region transmembrane domain ring H2 motif
protein 1		 ARABIDOPSIS THALIANA RECEPTOR
HOMOLOGY REGION TRANSMEMBRANE
DOMAIN RING H2 MOTIF PROTEIN 1,
receptor homology region
transmembrane domain ring H2 motif
protein 1		 -0.66 0.33 -0.31
60 AT1G79220 Mitochondrial transcription termination factor family
protein		 0.66 0.33 -0.32
61 AT5G40670 PQ-loop repeat family protein / transmembrane family
protein		 -0.66 0.31 -0.31
62 AT1G50760 Aminotransferase-like, plant mobile domain family protein 0.66 0.3 -0.3
63 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.66 0.31 -0.32
64 AT5G03570 iron regulated 2 ARABIDOPSIS THALIANA
IRON-REGULATED PROTEIN 2,
FERROPORTIN 2, iron regulated 2		 0.66 0.33 -0.32
65 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 0.66 0.29 -0.31
66 AT5G51690 1-amino-cyclopropane-1-carboxylate synthase 12 1-amino-cyclopropane-1-carboxylate
synthase 12		 0.66 0.32 -0.31
67 AT5G46115 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.31 -0.31
68 AT5G35710 transposable element gene -0.66 0.32 -0.3
69 AT4G27250 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.33 -0.34
70 AT4G33810 Glycosyl hydrolase superfamily protein -0.65 0.32 -0.29
71 AT3G08960 ARM repeat superfamily protein 0.65 0.29 -0.3
72 AT2G19000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 71 Blast hits to
71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.31 -0.29
73 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 0.65 0.32 -0.32
74 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.65 0.32 -0.29
75 AT5G38850 Disease resistance protein (TIR-NBS-LRR class) 0.65 0.32 -0.32
76 AT3G62640 Protein of unknown function (DUF3511) 0.65 0.32 -0.32
77 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.34 -0.32
78 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 0.65 0.31 -0.32
79 AT5G01440 BEST Arabidopsis thaliana protein match is: Insulinase
(Peptidase family M16) family protein (TAIR:AT1G06900.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.65 0.31 -0.31
80 AT5G23750 Remorin family protein -0.64 0.31 -0.31
81 AT5G60720 Protein of unknown function, DUF547 -0.64 0.29 -0.31
82 AT5G38170 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.64 0.31 -0.3
83 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.31 -0.33
84 AT5G61280 Remorin family protein -0.64 0.31 -0.31
85 AT2G43690 Concanavalin A-like lectin protein kinase family protein 0.64 0.32 -0.31
86 AT1G05760 Mannose-binding lectin superfamily protein restricted tev movement 1 -0.64 0.31 -0.31
87 AT3G62020 germin-like protein 10 germin-like protein 10 -0.64 0.31 -0.3
88 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.31 -0.32
89 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.34
90 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.63 0.31 -0.32
91 AT2G05850 serine carboxypeptidase-like 38 serine carboxypeptidase-like 38 -0.63 0.32 -0.28
92 AT4G32920 glycine-rich protein 0.63 0.33 -0.32
93 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1		 -0.63 0.32 -0.33
94 AT3G26614 transposable element gene 0.63 0.31 -0.33
95 AT1G26800 RING/U-box superfamily protein -0.63 0.31 -0.32
96 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.29 -0.29
97 AT5G55490 gamete expressed protein 1 GAMETE EXPRESSED PROTEIN 1, gamete
expressed protein 1		 0.63 0.33 -0.31
98 AT1G31030 transposable element gene 0.63 0.32 -0.3
99 AT5G04000 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.31 -0.31
100 AT5G01930 Glycosyl hydrolase superfamily protein AtMAN6, endo-beta-mannase 6 -0.63 0.31 -0.31
101 AT5G51160 Ankyrin repeat family protein 0.63 0.33 -0.32
102 AT1G03720 Cysteine proteinases superfamily protein 0.63 0.32 -0.34
103 AT3G57680 Peptidase S41 family protein -0.62 0.3 -0.31
104 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.62 0.31 -0.32
105 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein -0.62 0.33 -0.31
106 AT4G07580 transposable element gene -0.62 0.32 -0.32
107 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 -0.62 0.32 -0.32
108 AT2G24010 serine carboxypeptidase-like 23 serine carboxypeptidase-like 23 -0.61 0.3 -0.31
109 AT1G52560 HSP20-like chaperones superfamily protein -0.61 0.31 -0.31
110 AT3G50120 Plant protein of unknown function (DUF247) -0.61 0.32 -0.31
111 AT3G24500 multiprotein bridging factor 1C ATMBF1C, multiprotein bridging
factor 1C		 -0.61 0.32 -0.32
112 AT2G20620 Protein of unknown function (DUF626) -0.6 0.31 -0.31
113 AT1G65020 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endoplasmic
reticulum, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast
hits to 69 proteins in 27 species: Archae - 0; Bacteria -
18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.6 0.33 -0.31
114 AT5G11940 Subtilase family protein -0.6 0.33 -0.3
115 AT2G04000 transposable element gene -0.59 0.33 -0.31
116 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.59 0.3 -0.31
117 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.31
118 AT1G72150 PATELLIN 1 PATELLIN 1 -0.58 0.32 -0.32
119 AT3G49070 Protein of unknown function (DUF677) -0.58 0.31 -0.32
120 AT2G26150 heat shock transcription factor A2 heat shock transcription factor
A2, heat shock transcription
factor A2		 -0.58 0.3 -0.3
121 AT1G02950 glutathione S-transferase F4 glutathione S-transferase F4,
GLUTATHIONE S-TRANSFERASE 31,
glutathione S-transferase F4		 -0.57 0.32 -0.32
122 AT1G09610 Protein of unknown function (DUF579) -0.57 0.33 -0.31
123 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 -0.57 0.31 -0.29
124 AT3G53350 ROP interactive partner 4 ROP interactive partner 4 -0.57 0.34 -0.32
125 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.57 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0090 Fructose D-(-)-Fructose D-Fructose sorbitol degradation I,
fructan degradation 		-0.64 0.31 -0.32 C0090
127 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		-0.61 0.31 -0.31 C0098