AT1G53090 : SPA1-related 4
Query Information
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AGICode AT1G53090
Description SPA1-related 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G53090 SPA1-related 4 SPA1-related 4 1 0.31 -0.3
2 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 0.81 0.31 -0.33
3 ATCG00630 PSAJ PSAJ 0.77 0.31 -0.31
4 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.74 0.3 -0.31
5 AT1G71810 Protein kinase superfamily protein 0.74 0.32 -0.31
6 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 0.73 0.31 -0.32
7 AT3G57190 peptide chain release factor, putative peptide chain release factor 3 0.73 0.31 -0.31
8 AT1G71697 choline kinase 1 choline kinase 1, CHOLINE KINASE,
choline kinase 1		 -0.73 0.29 -0.31
9 AT5G08440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23490.1); Has 141 Blast
hits to 139 proteins in 35 species: Archae - 0; Bacteria -
9; Metazoa - 21; Fungi - 6; Plants - 94; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.72 0.28 -0.3
10 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 0.71 0.32 -0.31
11 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.7 0.31 -0.29
12 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 0.7 0.31 -0.31
13 AT3G18170 Glycosyltransferase family 61 protein -0.7 0.3 -0.34
14 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 -0.69 0.32 -0.31
15 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.3 -0.31
16 AT2G11090 transposable element gene 0.69 0.32 -0.32
17 AT3G13050 Major facilitator superfamily protein AtNiaP, nicotinate transporter -0.69 0.31 -0.32
18 AT3G44740 Class II aaRS and biotin synthetases superfamily protein 0.69 0.3 -0.32
19 AT4G38780 Pre-mRNA-processing-splicing factor 0.68 0.33 -0.32
20 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 -0.68 0.32 -0.32
21 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 0.68 0.3 -0.34
22 AT4G33870 Peroxidase superfamily protein 0.68 0.32 -0.31
23 AT2G10610 transposable element gene 0.68 0.29 -0.3
24 AT5G22360 vesicle-associated membrane protein 714 vesicle-associated membrane
protein 714, VAMP714,
vesicle-associated membrane
protein 714		 -0.67 0.29 -0.31
25 AT1G03960 Calcium-binding EF hand family protein 0.67 0.31 -0.3
26 AT5G01270 carboxyl-terminal domain (ctd) phosphatase-like 2 ATCPL2, carboxyl-terminal domain
(ctd) phosphatase-like 2		 0.67 0.31 -0.32
27 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE 0.67 0.32 -0.32
28 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.32
29 AT4G17330 G2484-1 protein G2484-1 protein, G2484-1 protein 0.67 0.33 -0.31
30 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 0.67 0.31 -0.31
31 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.31 -0.29
32 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.66 0.31 -0.33
33 AT5G35930 AMP-dependent synthetase and ligase family protein 0.66 0.32 -0.32
34 AT5G41850 alpha/beta-Hydrolases superfamily protein 0.66 0.33 -0.32
35 AT1G10700 phosphoribosyl pyrophosphate (PRPP) synthase 3 phosphoribosyl pyrophosphate
(PRPP) synthase 3		 -0.66 0.3 -0.3
36 AT5G39870 Protein of unknown function (DUF1216) 0.66 0.31 -0.29
37 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.66 0.31 -0.32
38 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.65 0.3 -0.32
39 AT5G49430 WD40/YVTN repeat-like-containing domain;Bromodomain 0.65 0.32 -0.31
40 AT3G03300 dicer-like 2 DICER-LIKE 2, dicer-like 2 0.65 0.29 -0.31
41 AT1G21210 wall associated kinase 4 wall associated kinase 4 0.65 0.33 -0.33
42 AT1G50250 FTSH protease 1 FTSH protease 1 0.65 0.3 -0.3
43 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 0.65 0.33 -0.31
44 AT3G07400 lipase class 3 family protein 0.65 0.32 -0.32
45 AT3G13820 F-box and associated interaction domains-containing protein 0.65 0.3 -0.33
46 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 0.65 0.31 -0.32
47 AT2G32640 Lycopene beta/epsilon cyclase protein 0.65 0.32 -0.33
48 AT5G58870 FTSH protease 9 FTSH protease 9 0.65 0.33 -0.33
49 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.65 0.31 -0.3
50 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 0.65 0.34 -0.31
51 AT1G27140 glutathione S-transferase tau 14 glutathione S-transferase tau 14,
GLUTATHIONE S-TRANSFERASE 13,
glutathione S-transferase tau 14		 -0.65 0.28 -0.32
52 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 0.65 0.31 -0.32
53 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 -0.64 0.31 -0.3
54 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 -0.64 0.33 -0.32
55 AT1G30970 zinc finger (C2H2 type) family protein suppressor of FRIGIDA4 0.64 0.32 -0.33
56 AT5G44530 Subtilase family protein 0.64 0.32 -0.3
57 AT1G28680 HXXXD-type acyl-transferase family protein -0.64 0.32 -0.3
58 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.64 0.3 -0.32
59 AT4G38760 Protein of unknown function (DUF3414) 0.64 0.31 -0.32
60 AT5G24970 Protein kinase superfamily protein 0.64 0.31 -0.33
61 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 -0.64 0.32 -0.31
62 ATCG00300 YCF9 YCF9 0.64 0.32 -0.32
63 AT4G39010 glycosyl hydrolase 9B18 glycosyl hydrolase 9B18, glycosyl
hydrolase 9B18		 0.63 0.31 -0.3
64 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 -0.63 0.33 -0.31
65 AT1G78840 F-box/RNI-like/FBD-like domains-containing protein 0.63 0.33 -0.33
66 AT2G23770 protein kinase family protein / peptidoglycan-binding LysM
domain-containing protein		 -0.63 0.32 -0.32
67 AT1G21700 SWITCH/sucrose nonfermenting 3C SWITCH/sucrose nonfermenting 3C,
CHB4, SWITCH/sucrose nonfermenting
3C		 0.63 0.32 -0.32
68 AT4G39930 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.32 -0.33
69 AT1G80510 Transmembrane amino acid transporter family protein -0.62 0.35 -0.32
70 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 0.62 0.32 -0.33
71 AT1G66680 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AR401 -0.62 0.31 -0.33
72 AT5G58910 laccase 16 laccase 16 -0.62 0.3 -0.3
73 AT1G80780 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.62 0.31 -0.32
74 AT3G50130 Plant protein of unknown function (DUF247) -0.62 0.35 -0.32
75 AT5G02480 HSP20-like chaperones superfamily protein 0.62 0.3 -0.32
76 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 -0.62 0.32 -0.31
77 AT3G44910 cation/H+ exchanger 12 ATCHX12, cation/H+ exchanger 12 0.62 0.31 -0.32
78 AT4G17486 PPPDE putative thiol peptidase family protein -0.61 0.33 -0.32
79 AT2G24000 serine carboxypeptidase-like 22 serine carboxypeptidase-like 22 -0.61 0.32 -0.31
80 AT2G03730 ACT domain repeat 5 ACT domain repeat 5 -0.61 0.3 -0.32
81 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 0.61 0.32 -0.3
82 AT5G45570 Ulp1 protease family protein 0.61 0.29 -0.3
83 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 0.61 0.31 -0.32
84 AT1G32240 Homeodomain-like superfamily protein KANADI 2 0.61 0.3 -0.33
85 AT1G24010 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.61 0.32 -0.3
86 AT1G74840 Homeodomain-like superfamily protein -0.61 0.31 -0.33
87 AT4G15430 ERD (early-responsive to dehydration stress) family protein 0.61 0.3 -0.3
88 AT5G37260 Homeodomain-like superfamily protein CIRCADIAN 1, REVEILLE 2 0.61 0.32 -0.3
89 AT1G01110 IQ-domain 18 IQ-domain 18 -0.6 0.32 -0.32
90 AT4G19185 nodulin MtN21 /EamA-like transporter family protein -0.59 0.34 -0.3
91 AT4G33370 DEA(D/H)-box RNA helicase family protein -0.59 0.3 -0.31
92 AT4G29700 Alkaline-phosphatase-like family protein -0.59 0.32 -0.32
93 AT5G52020 Integrase-type DNA-binding superfamily protein -0.59 0.32 -0.31
94 AT2G10020 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.3 -0.31
95 AT4G29740 cytokinin oxidase 4 ATCKX4, cytokinin oxidase 4 -0.58 0.33 -0.32
96 AT3G23550 MATE efflux family protein -0.58 0.32 -0.31
97 AT3G58390 Eukaryotic release factor 1 (eRF1) family protein -0.58 0.3 -0.31
98 AT3G59730 Concanavalin A-like lectin protein kinase family protein -0.58 0.32 -0.31
99 AT4G14695 Uncharacterised protein family (UPF0041) -0.58 0.3 -0.33
100 AT5G44860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits
to 227 proteins in 25 species: Archae - 0; Bacteria - 13;
Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.58 0.3 -0.33
101 AT3G14430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 16 Blast hits to 16 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.57 0.31 -0.31
102 AT5G27430 Signal peptidase subunit -0.57 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		-0.74 0.45 -0.43 C0228