AT1G52950 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G52950
Description Nucleic acid-binding, OB-fold-like protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G52950 Nucleic acid-binding, OB-fold-like protein 1 0.31 -0.31
2 AT5G11470 bromo-adjacent homology (BAH) domain-containing protein -0.74 0.33 -0.32
3 AT3G47100 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.73 0.32 -0.32
4 AT1G20540 Transducin/WD40 repeat-like superfamily protein -0.72 0.34 -0.31
5 AT1G75770 unknown protein; Has 6 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.72 0.3 -0.33
6 AT2G36835 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.72 0.29 -0.31
7 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 0.71 0.33 -0.31
8 AT3G47430 peroxin 11B peroxin 11B -0.71 0.31 -0.3
9 AT4G25910 NFU domain protein 3 ATCNFU3, NFU domain protein 3 -0.71 0.32 -0.29
10 AT3G62430 Protein with RNI-like/FBD-like domains -0.7 0.29 -0.31
11 AT2G37450 nodulin MtN21 /EamA-like transporter family protein -0.7 0.31 -0.29
12 AT1G23310 glutamate:glyoxylate aminotransferase ALANINE-2-OXOGLUTARATE
AMINOTRANSFERASE 1,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 1,
glutamate:glyoxylate
aminotransferase		 -0.7 0.3 -0.3
13 AT5G24165 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G23885.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.7 0.34 -0.35
14 AT4G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.7 0.34 -0.33
15 AT2G41460 apurinic endonuclease-redox protein apurinic endonuclease-redox
protein		 -0.69 0.33 -0.3
16 AT3G17860 jasmonate-zim-domain protein 3 JASMONATE-INSENSITIVE 3,
jasmonate-zim-domain protein 3,
TIFY6B		 0.69 0.34 -0.32
17 AT2G26500 cytochrome b6f complex subunit (petM), putative -0.69 0.31 -0.32
18 AT1G17100 SOUL heme-binding family protein -0.68 0.31 -0.3
19 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 -0.68 0.3 -0.32
20 AT1G74180 receptor like protein 14 receptor like protein 14, receptor
like protein 14		 -0.67 0.31 -0.32
21 AT2G37000 TCP family transcription factor -0.67 0.3 -0.32
22 AT3G04760 Pentatricopeptide repeat (PPR-like) superfamily protein -0.67 0.32 -0.34
23 AT2G23390 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase
(InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins
in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0;
Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes -
1088 (source: NCBI BLink).		 -0.66 0.3 -0.32
24 AT2G05400 Ubiquitin-specific protease family C19-related protein -0.66 0.29 -0.35
25 AT3G56830 Protein of unknown function (DUF565) -0.66 0.3 -0.31
26 AT2G29320 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.31 -0.32
27 AT5G54800 glucose 6-phosphate/phosphate translocator 1 ARABIDOPSIS GLUCOSE
6-PHOSPHATE/PHOSPHATE TRANSLOCATOR
1, glucose 6-phosphate/phosphate
translocator 1		 0.66 0.33 -0.32
28 AT1G64500 Glutaredoxin family protein -0.66 0.32 -0.32
29 AT5G02250 Ribonuclease II/R family protein ARABIDOPSIS THALIANA MITOCHONDRIAL
RNASE II, EMBRYO DEFECTIVE 2730,
ribonucleotide reductase 1		 -0.65 0.32 -0.31
30 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 -0.64 0.31 -0.33
31 AT2G47430 Signal transduction histidine kinase CYTOKININ-INDEPENDENT 1 0.64 0.3 -0.32
32 AT2G01320 ABC-2 type transporter family protein ATP-binding cassette G7 -0.64 0.33 -0.31
33 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 0.64 0.31 -0.3
34 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 -0.64 0.29 -0.32
35 AT4G10300 RmlC-like cupins superfamily protein -0.64 0.31 -0.35
36 AT5G62140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 13 growth stages; Has 60 Blast hits to 60 proteins
in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0;
Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 -0.62 0.34 -0.29
37 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 0.62 0.32 -0.31
38 AT1G69935 short hypocotyl in white light1 SHORT HYPOCOTYL IN WHITE LIGHT1 -0.62 0.33 -0.31
39 AT2G42920 Pentatricopeptide repeat (PPR-like) superfamily protein -0.62 0.31 -0.34
40 AT5G08400 Protein of unknown function (DUF3531) -0.62 0.32 -0.32
41 AT1G49980 DNA/RNA polymerases superfamily protein -0.62 0.31 -0.34
42 AT2G44200 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA
splicing factor		 0.62 0.32 -0.32
43 AT5G53060 RNA-binding KH domain-containing protein 0.61 0.3 -0.32
44 AT1G73860 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.31 -0.32
45 AT2G18200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G18210.1); Has 19 Blast hits to 19
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.6 0.34 -0.31
46 AT2G17330 putative obtusifoliol 14-alpha demethylase. Expressed
pseudogene.		 CYTOCHROME P450 51A1, CYTOCHROME
P450 51G2		 0.6 0.33 -0.32
47 AT4G27460 Cystathionine beta-synthase (CBS) family protein 0.59 0.32 -0.32
48 AT1G11470 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.3 -0.33
49 AT1G67410 Exostosin family protein 0.59 0.32 -0.31
50 AT3G14340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.33 -0.32
51 AT5G50900 ARM repeat superfamily protein 0.58 0.32 -0.32
52 AT5G62865 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G48020.1).		 0.57 0.3 -0.34
53 AT3G50130 Plant protein of unknown function (DUF247) 0.56 0.31 -0.31
54 AT2G40370 laccase 5 laccase 5 0.55 0.3 -0.31
55 AT5G51360 Transcription elongation factor (TFIIS) family protein 0.55 0.34 -0.32
56 AT2G31460 Domain of unknown function (DUF313) 0.55 0.33 -0.32
57 AT1G72410 COP1-interacting protein-related 0.55 0.33 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
58 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - 0.76 0.48 -0.53 C0241