AGICode | AT1G79650 |
Description | Rad23 UV excision repair protein family |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G79650 | Rad23 UV excision repair protein family | Arabidopsis thaliana aldehyde oxidase 1, RADIATION SENSITIVE23B |
1 | 0.34 | -0.32 | ||
2 | AT1G61580 | R-protein L3 B | ARABIDOPSIS RIBOSOMAL PROTEIN 2, R-protein L3 B |
0.9 | 0.33 | -0.32 | ||
3 | AT4G29410 | Ribosomal L28e protein family | 0.89 | 0.31 | -0.32 | |||
4 | AT2G19730 | Ribosomal L28e protein family | 0.89 | 0.32 | -0.3 | |||
5 | AT3G57000 | nucleolar essential protein-related | 0.88 | 0.31 | -0.34 | |||
6 | AT3G20050 | T-complex protein 1 alpha subunit | T-complex protein 1 alpha subunit, T-complex protein 1 alpha subunit |
0.88 | 0.3 | -0.31 | ||
7 | AT3G16780 | Ribosomal protein L19e family protein | 0.88 | 0.34 | -0.32 | |||
8 | AT2G20450 | Ribosomal protein L14 | 0.87 | 0.32 | -0.3 | |||
9 | AT4G34740 | GLN phosphoribosyl pyrophosphate amidotransferase 2 | GLN phosphoribosyl pyrophosphate amidotransferase 2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CHLOROPLAST IMPORT APPARATUS 1 |
0.86 | 0.32 | -0.34 | ||
10 | AT4G10480 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein |
0.86 | 0.33 | -0.32 | |||
11 | AT1G20950 | Phosphofructokinase family protein | 0.86 | 0.31 | -0.32 | |||
12 | AT3G60245 | Zinc-binding ribosomal protein family protein | 0.86 | 0.3 | -0.33 | |||
13 | AT4G25740 | RNA binding Plectin/S10 domain-containing protein | 0.86 | 0.3 | -0.3 | |||
14 | AT4G17520 | Hyaluronan / mRNA binding family | 0.85 | 0.33 | -0.31 | |||
15 | AT1G18540 | Ribosomal protein L6 family protein | 0.85 | 0.32 | -0.32 | |||
16 | AT1G72370 | 40s ribosomal protein SA | AP40, 40s ribosomal protein SA, RP40, RPSAA |
0.85 | 0.33 | -0.31 | ||
17 | AT3G12390 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein |
0.85 | 0.31 | -0.31 | |||
18 | AT5G18640 | alpha/beta-Hydrolases superfamily protein | -0.84 | 0.31 | -0.31 | |||
19 | AT4G31700 | ribosomal protein S6 | ribosomal protein S6, RPS6A | 0.84 | 0.32 | -0.33 | ||
20 | AT2G45730 | eukaryotic initiation factor 3 gamma subunit family protein | 0.84 | 0.31 | -0.35 | |||
21 | AT3G18130 | receptor for activated C kinase 1C | receptor for activated C kinase 1C, receptor for activated C kinase 1C |
0.84 | 0.31 | -0.3 | ||
22 | AT1G63660 | GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative |
0.84 | 0.31 | -0.31 | |||
23 | AT5G61020 | evolutionarily conserved C-terminal region 3 | evolutionarily conserved C-terminal region 3 |
0.84 | 0.31 | -0.3 | ||
24 | AT2G39390 | Ribosomal L29 family protein | 0.84 | 0.31 | -0.32 | |||
25 | AT3G55280 | ribosomal protein L23AB | RIBOSOMAL PROTEIN L23A2, ribosomal protein L23AB |
0.84 | 0.33 | -0.33 | ||
26 | AT3G13230 | RNA-binding KH domain-containing protein | 0.84 | 0.31 | -0.31 | |||
27 | AT3G05560 | Ribosomal L22e protein family | 0.83 | 0.31 | -0.32 | |||
28 | AT5G67510 | Translation protein SH3-like family protein | 0.83 | 0.35 | -0.31 | |||
29 | AT3G55010 | phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) |
ATPURM, EMBRYO DEFECTIVE 2818, PUR5 |
0.83 | 0.3 | -0.3 | ||
30 | AT3G04400 | Ribosomal protein L14p/L23e family protein | embryo defective 2171 | 0.83 | 0.31 | -0.27 | ||
31 | AT1G04190 | Tetratricopeptide repeat (TPR)-like superfamily protein | tetratricopeptide repeat 3 | 0.83 | 0.33 | -0.31 | ||
32 | AT5G22650 | histone deacetylase 2B | ARABIDOPSIS HISTONE DEACETYLASE 2, ATHD2B, HISTONE DEACETYLASE 2, histone deacetylase 2B, HDA4, HDT02, HDT2 |
0.83 | 0.33 | -0.31 | ||
33 | AT3G11710 | lysyl-tRNA synthetase 1 | lysyl-tRNA synthetase 1 | 0.82 | 0.33 | -0.31 | ||
34 | AT4G25890 | 60S acidic ribosomal protein family | 0.82 | 0.3 | -0.33 | |||
35 | AT2G45710 | Zinc-binding ribosomal protein family protein | 0.82 | 0.31 | -0.31 | |||
36 | AT1G17560 | Ribosomal protein L14p/L23e family protein | HUELLENLOS | 0.82 | 0.33 | -0.32 | ||
37 | AT3G57490 | Ribosomal protein S5 family protein | 0.82 | 0.3 | -0.33 | |||
38 | AT3G44750 | histone deacetylase 3 | ATHD2A, HISTONE DEACETYLASE 2A, histone deacetylase 3, HDT1 |
0.82 | 0.31 | -0.3 | ||
39 | AT3G06700 | Ribosomal L29e protein family | 0.82 | 0.3 | -0.31 | |||
40 | AT3G04770 | 40s ribosomal protein SA B | 40s ribosomal protein SA B | 0.81 | 0.33 | -0.33 | ||
41 | AT2G27840 | histone deacetylase-related / HD-related | HISTONE DEACETYLASE 13, HDT04, HDT4 |
0.81 | 0.3 | -0.33 | ||
42 | AT4G20440 | small nuclear ribonucleoprotein associated protein B | small nuclear ribonucleoprotein associated protein B |
0.81 | 0.29 | -0.3 | ||
43 | AT3G49590 | Autophagy-related protein 13 | autophagy-related 13 | -0.81 | 0.3 | -0.32 | ||
44 | AT3G03960 | TCP-1/cpn60 chaperonin family protein | 0.81 | 0.32 | -0.33 | |||
45 | AT5G50810 | translocase inner membrane subunit 8 | translocase inner membrane subunit 8 |
0.81 | 0.33 | -0.31 | ||
46 | AT3G56090 | ferritin 3 | ferritin 3, ferritin 3 | 0.81 | 0.31 | -0.32 | ||
47 | AT5G35530 | Ribosomal protein S3 family protein | 0.8 | 0.31 | -0.32 | |||
48 | AT5G11760 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1764, eukaryotic (InterPro:IPR013885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.8 | 0.29 | -0.3 | |||
49 | AT2G28600 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.8 | 0.32 | -0.31 | |||
50 | AT3G22480 | prefoldin 2 | prefoldin 2 | 0.8 | 0.31 | -0.31 | ||
51 | AT5G62440 | Protein of unknown function (DUF3223) | 0.8 | 0.32 | -0.3 | |||
52 | AT4G25630 | fibrillarin 2 | ATFIB2, fibrillarin 2 | 0.8 | 0.32 | -0.3 | ||
53 | AT3G52040 | unknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.79 | 0.33 | -0.32 | |||
54 | AT3G18740 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | receptor-like kinase 902 | 0.79 | 0.31 | -0.34 | ||
55 | AT4G38710 | glycine-rich protein | 0.79 | 0.32 | -0.31 | |||
56 | AT1G24070 | cellulose synthase-like A10 | cellulose synthase-like A10, CELLULOSE SYNTHASE LIKE A10, cellulose synthase-like A10 |
-0.79 | 0.32 | -0.3 | ||
57 | AT1G28960 | nudix hydrolase homolog 15 | ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15, nudix hydrolase homolog 15, nudix hydrolase homolog 15 |
-0.78 | 0.32 | -0.3 | ||
58 | AT3G09770 | RING/U-box superfamily protein | LOSS OF GDU 2 | -0.78 | 0.31 | -0.31 | ||
59 | AT1G73980 | Phosphoribulokinase / Uridine kinase family | -0.77 | 0.34 | -0.33 | |||
60 | AT4G18140 | SCP1-like small phosphatase 4b | SCP1-like small phosphatase 4b | -0.77 | 0.3 | -0.3 | ||
61 | AT1G05840 | Eukaryotic aspartyl protease family protein | -0.77 | 0.31 | -0.32 | |||
62 | AT1G17550 | homology to ABI2 | homology to ABI2 | -0.76 | 0.32 | -0.34 | ||
63 | AT5G43430 | electron transfer flavoprotein beta | electron transfer flavoprotein beta |
-0.76 | 0.32 | -0.31 | ||
64 | AT1G44770 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.75 | 0.3 | -0.32 | |||
65 | AT3G51730 | saposin B domain-containing protein | -0.75 | 0.32 | -0.32 | |||
66 | AT3G53960 | Major facilitator superfamily protein | -0.75 | 0.32 | -0.31 | |||
67 | AT1G49670 | ARP protein (REF) | NQR | -0.74 | 0.32 | -0.32 | ||
68 | AT3G06170 | Serinc-domain containing serine and sphingolipid biosynthesis protein |
-0.74 | 0.3 | -0.31 | |||
69 | AT4G18160 | Ca2+ activated outward rectifying K+ channel 6 | CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6, ATTPK3, Ca2+ activated outward rectifying K+ channel 6, TPK3 |
-0.74 | 0.33 | -0.31 | ||
70 | AT2G38790 | unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.74 | 0.3 | -0.31 | |||
71 | AT3G28007 | Nodulin MtN3 family protein | AtSWEET4, SWEET4 | -0.74 | 0.3 | -0.32 | ||
72 | AT1G01240 | unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.74 | 0.33 | -0.31 | |||
73 | AT5G57550 | xyloglucan endotransglucosylase/hydrolase 25 | xyloglucan endotransglucosylase/hydrolase 25, xyloglucan endotransglycosylase 3 |
-0.73 | 0.31 | -0.28 | ||
74 | AT1G58200 | MSCS-like 3 | MSCS-like 3 | -0.73 | 0.31 | -0.31 | ||
75 | AT3G60140 | Glycosyl hydrolase superfamily protein | BETA GLUCOSIDASE 30, DARK INDUCIBLE 2, SENESCENCE-RELATED GENE 2 |
-0.73 | 0.28 | -0.32 | ||
76 | AT1G55280 | Lipase/lipooxygenase, PLAT/LH2 family protein | -0.73 | 0.32 | -0.33 | |||
77 | AT1G30500 | nuclear factor Y, subunit A7 | nuclear factor Y, subunit A7 | -0.73 | 0.34 | -0.3 | ||
78 | AT1G62310 | transcription factor jumonji (jmjC) domain-containing protein |
-0.72 | 0.3 | -0.32 | |||
79 | AT4G38350 | Patched family protein | -0.72 | 0.32 | -0.31 | |||
80 | AT5G65840 | Thioredoxin superfamily protein | -0.72 | 0.31 | -0.33 | |||
81 | AT4G30390 | unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.3 | -0.32 | |||
82 | AT1G54710 | homolog of yeast autophagy 18 (ATG18) H | homolog of yeast autophagy 18 (ATG18) H, homolog of yeast autophagy 18 (ATG18) H |
-0.71 | 0.3 | -0.31 | ||
83 | AT1G73740 | UDP-Glycosyltransferase superfamily protein | -0.71 | 0.32 | -0.33 | |||
84 | AT2G40830 | RING-H2 finger C1A | RING-H2 finger C1A | -0.71 | 0.32 | -0.31 | ||
85 | AT1G12050 | fumarylacetoacetase, putative | -0.71 | 0.3 | -0.32 | |||
86 | AT5G57815 | Cytochrome c oxidase, subunit Vib family protein | -0.71 | 0.31 | -0.31 | |||
87 | AT4G27990 | YGGT family protein | ATYLMG1-2, YLMG1-2 | -0.71 | 0.3 | -0.31 | ||
88 | AT5G37670 | HSP20-like chaperones superfamily protein | -0.71 | 0.32 | -0.29 | |||
89 | AT4G19840 | phloem protein 2-A1 | phloem protein 2-A1, phloem protein 2-A1, phloem protein 2-A1 |
-0.71 | 0.3 | -0.32 | ||
90 | AT2G20920 | Protein of unknown function (DUF3353) | -0.7 | 0.34 | -0.31 | |||
91 | AT5G22850 | Eukaryotic aspartyl protease family protein | -0.7 | 0.32 | -0.32 | |||
92 | AT2G28400 | Protein of unknown function, DUF584 | -0.7 | 0.29 | -0.3 | |||
93 | AT3G54290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.7 | 0.31 | -0.31 | |||
94 | AT5G16550 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.33 | -0.33 | |||
95 | AT4G32160 | Phox (PX) domain-containing protein | -0.7 | 0.34 | -0.32 | |||
96 | AT3G25740 | methionine aminopeptidase 1C | methionine aminopeptidase 1C, METHIONINE AMINOPEPTIDASE 1C |
-0.69 | 0.34 | -0.31 | ||
97 | AT1G31480 | shoot gravitropism 2 (SGR2) | SHOOT GRAVITROPISM 2 | -0.69 | 0.3 | -0.31 | ||
98 | AT4G13270 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.69 | 0.31 | -0.31 | |||
99 | AT5G63200 | tetratricopeptide repeat (TPR)-containing protein | -0.69 | 0.32 | -0.31 | |||
100 | AT5G11840 | Protein of unknown function (DUF1230) | -0.69 | 0.3 | -0.32 | |||
101 | AT4G33940 | RING/U-box superfamily protein | -0.69 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
102 | C0217 | Putative glucosinole | - | - | - | 0.87 | 0.45 | -0.44 | ||
103 | C0176 | MST_2406.9 | - | - | - | -0.79 | 0.43 | -0.48 | ||
104 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
-0.74 | 0.32 | -0.29 | ||
105 | C0054 | Agmatine | - | Agmatine | putrescine biosynthesis I, putrescine biosynthesis II, superpathway of polyamine biosynthesis |
-0.72 | 0.3 | -0.32 | ||
106 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
-0.72 | 0.32 | -0.32 | ||
107 | C0180 | MST_2539.9 | - | - | - | -0.71 | 0.46 | -0.49 | ||
108 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | -0.7 | 0.41 | -0.43 | ||
109 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.7 | 0.46 | -0.44 | ||
110 | C0169 | MST_2105.7 | - | - | - | -0.69 | 0.41 | -0.45 |