AT1G79690 : nudix hydrolase homolog 3
Query Information
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AGICode AT1G79690
Description nudix hydrolase homolog 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 1 0.31 -0.33
2 AT1G06180 myb domain protein 13 myb domain protein 13, ATMYBLFGN,
myb domain protein 13		 0.85 0.32 -0.31
3 AT5G55120 galactose-1-phosphate guanylyltransferase
(GDP)s;GDP-D-glucose phosphorylases;quercetin
4'-O-glucosyltransferases		 VITAMIN C DEFECTIVE 5 0.84 0.31 -0.32
4 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 0.84 0.3 -0.32
5 AT1G76390 ARM repeat superfamily protein plant U-box 43 0.83 0.3 -0.32
6 AT4G25230 RPM1 interacting protein 2 RPM1 interacting protein 2 0.83 0.33 -0.31
7 AT5G62210 Embryo-specific protein 3, (ATS3) -0.82 0.33 -0.32
8 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 0.82 0.31 -0.34
9 AT2G25910 3'-5' exonuclease domain-containing protein / K homology
domain-containing protein / KH domain-containing protein		 0.82 0.31 -0.33
10 AT5G46180 ornithine-delta-aminotransferase ornithine-delta-aminotransferase 0.82 0.3 -0.31
11 AT4G29210 gamma-glutamyl transpeptidase 4 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 0.82 0.31 -0.31
12 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B -0.82 0.32 -0.31
13 AT5G51550 EXORDIUM like 3 EXORDIUM like 3 -0.81 0.31 -0.3
14 AT5G11420 Protein of unknown function, DUF642 -0.81 0.33 -0.31
15 AT1G29195 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, 4 leaf senescence
stage, petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.81 0.29 -0.32
16 AT1G61120 terpene synthase 04 GERANYLLINALOOL SYNTHASE, terpene
synthase 04, TERPENE SYNTHASE 4		 0.81 0.31 -0.34
17 AT1G04240 AUX/IAA transcriptional regulator family protein indole-3-acetic acid inducible 3,
SHORT HYPOCOTYL 2		 -0.81 0.32 -0.31
18 AT1G72800 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8 0.3 -0.3
19 AT2G45970 cytochrome P450, family 86, subfamily A, polypeptide 8 cytochrome P450, family 86,
subfamily A, polypeptide 8,
LACERATA		 -0.8 0.31 -0.34
20 AT1G30690 Sec14p-like phosphatidylinositol transfer family protein -0.8 0.29 -0.31
21 AT3G17250 Protein phosphatase 2C family protein 0.79 0.31 -0.31
22 AT5G65750 2-oxoglutarate dehydrogenase, E1 component 0.79 0.32 -0.32
23 AT4G38770 proline-rich protein 4 ARABIDOPSIS THALIANA PROLINE-RICH
PROTEIN 4, proline-rich protein 4		 -0.79 0.31 -0.31
24 AT1G76470 NAD(P)-binding Rossmann-fold superfamily protein 0.78 0.31 -0.32
25 AT1G21880 lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1
precursor		 -0.78 0.31 -0.3
26 AT2G45470 FASCICLIN-like arabinogalactan protein 8 ARABINOGALACTAN PROTEIN 8,
FASCICLIN-like arabinogalactan
protein 8		 -0.78 0.31 -0.3
27 AT5G19530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ACAULIS 5 -0.78 0.31 -0.31
28 AT3G30390 Transmembrane amino acid transporter family protein 0.78 0.33 -0.32
29 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.78 0.3 -0.31
30 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8		 -0.78 0.32 -0.32
31 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain -0.78 0.33 -0.32
32 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 0.78 0.33 -0.33
33 AT5G59870 histone H2A 6 histone H2A 6 -0.78 0.3 -0.33
34 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 0.77 0.33 -0.32
35 AT5G66330 Leucine-rich repeat (LRR) family protein -0.77 0.31 -0.31
36 AT4G31240 protein kinase C-like zinc finger protein 0.77 0.31 -0.32
37 AT1G04850 ubiquitin-associated (UBA)/TS-N domain-containing protein 0.77 0.28 -0.32
38 AT5G17310 UDP-glucose pyrophosphorylase 2 UDP-GLUCOSE PYROPHOSPHORYLASE 2,
UDP-glucose pyrophosphorylase 2		 -0.77 0.3 -0.31
39 AT4G12830 alpha/beta-Hydrolases superfamily protein -0.77 0.33 -0.31
40 AT1G19680 RING/U-box superfamily protein 0.77 0.34 -0.32
41 AT2G40480 Plant protein of unknown function (DUF827) -0.77 0.32 -0.31
42 AT5G42850 Thioredoxin superfamily protein 0.77 0.3 -0.33
43 AT4G26530 Aldolase superfamily protein -0.77 0.32 -0.3
44 AT3G48170 aldehyde dehydrogenase 10A9 aldehyde dehydrogenase 10A9 0.77 0.29 -0.32
45 AT1G77630 Peptidoglycan-binding LysM domain-containing protein lysin-motif (LysM) domain protein
3		 -0.77 0.33 -0.34
46 AT3G17840 receptor-like kinase 902 receptor-like kinase 902 -0.76 0.31 -0.32
47 AT4G36360 beta-galactosidase 3 beta-galactosidase 3 -0.76 0.31 -0.32
48 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.33 -0.32
49 AT1G69880 thioredoxin H-type 8 thioredoxin H-type 8, thioredoxin
H-type 8		 0.76 0.3 -0.33
50 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 0.76 0.32 -0.32
51 AT4G16330 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.75 0.33 -0.31
52 AT5G48460 Actin binding Calponin homology (CH) domain-containing
protein		 -0.75 0.33 -0.33
53 AT2G35960 NDR1/HIN1-like 12 NDR1/HIN1-like 12 -0.75 0.31 -0.31
54 AT3G56130 biotin/lipoyl attachment domain-containing protein -0.75 0.33 -0.31
55 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1		 0.75 0.32 -0.32
56 AT5G10390 Histone superfamily protein -0.75 0.3 -0.31
57 AT3G16857 response regulator 1 response regulator 1, response
regulator 1		 0.75 0.33 -0.32
58 AT2G29065 GRAS family transcription factor 0.75 0.32 -0.31
59 AT5G66530 Galactose mutarotase-like superfamily protein -0.75 0.33 -0.31
60 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 0.75 0.33 -0.31
61 AT4G29360 O-Glycosyl hydrolases family 17 protein -0.75 0.32 -0.34
62 AT3G62300 DOMAIN OF UNKNOWN FUNCTION 724 7 DOMAIN OF UNKNOWN FUNCTION 724 7,
DOMAIN OF UNKNOWN FUNCTION 724 7		 -0.74 0.31 -0.34
63 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8		 -0.74 0.31 -0.32
64 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 0.74 0.31 -0.3
65 AT3G27750 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12
growth stages; BEST Arabidopsis thaliana protein match is:
Vacuolar sorting protein 9 (VPS9) domain
(TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 EMBRYO DEFECTIVE 3123 -0.74 0.33 -0.3
66 AT5G46280 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 3 -0.74 0.3 -0.32
67 AT4G31840 early nodulin-like protein 15 AtENODL15, early nodulin-like
protein 15		 -0.74 0.3 -0.31
68 AT1G08315 ARM repeat superfamily protein 0.74 0.32 -0.32
69 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 -0.74 0.31 -0.31
70 AT5G61450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.33 -0.32
71 AT1G66250 O-Glycosyl hydrolases family 17 protein -0.74 0.32 -0.32
72 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein 0.74 0.3 -0.33
73 AT4G03100 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.74 0.3 -0.33
74 AT1G48790 associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3
domain of STAM 1		 0.74 0.31 -0.3
75 AT5G08020 RPA70-kDa subunit B ARABIDOPSIS THALIANA RPA70-KDA
SUBUNIT B, RPA70-kDa subunit B		 -0.74 0.3 -0.33
76 AT5G16000 NSP-interacting kinase 1 NSP-interacting kinase 1 -0.74 0.32 -0.3
77 AT5G22940 FRA8 homolog FRA8 homolog -0.74 0.31 -0.29
78 AT4G32150 vesicle-associated membrane protein 711 vesicle-associated membrane
protein 711, vesicle-associated
membrane protein 711		 0.74 0.31 -0.31
79 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 -0.74 0.32 -0.3
80 AT5G45700 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.74 0.3 -0.31
81 AT4G28220 NAD(P)H dehydrogenase B1 NAD(P)H dehydrogenase B1 -0.73 0.31 -0.29
82 AT3G17640 Leucine-rich repeat (LRR) family protein -0.73 0.31 -0.31
83 AT2G19620 N-MYC downregulated-like 3 N-MYC downregulated-like 3 -0.73 0.32 -0.32
84 AT4G29020 glycine-rich protein -0.73 0.31 -0.3
85 AT3G63120 cyclin p1;1 cyclin p1;1 -0.73 0.3 -0.3
86 AT5G48900 Pectin lyase-like superfamily protein -0.73 0.31 -0.35
87 AT3G01500 carbonic anhydrase 1 BETA CARBONIC ANHYDRASE 1,
ARABIDOPSIS THALIANA SALICYLIC
ACID-BINDING PROTEIN 3, carbonic
anhydrase 1, SALICYLIC
ACID-BINDING PROTEIN 3		 -0.73 0.32 -0.32
88 AT1G68810 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.73 0.31 -0.32
89 AT3G63140 chloroplast stem-loop binding protein of 41 kDa chloroplast stem-loop binding
protein of 41 kDa		 -0.73 0.32 -0.33
90 AT4G04890 protodermal factor 2 protodermal factor 2 -0.72 0.31 -0.32
91 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 -0.72 0.33 -0.32
92 AT1G10780 F-box/RNI-like superfamily protein -0.72 0.32 -0.32
93 AT4G12980 Auxin-responsive family protein -0.72 0.32 -0.33
94 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 -0.72 0.32 -0.31
95 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 -0.72 0.31 -0.33
96 AT3G02380 CONSTANS-like 2 CONSTANS-LIKE 2, CONSTANS-like 2 -0.71 0.33 -0.3
97 AT1G69523 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.71 0.35 -0.32
98 AT1G56720 Protein kinase superfamily protein -0.71 0.32 -0.32
99 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 -0.71 0.31 -0.31
100 AT3G60320 Protein of unknown function (DUF630 and DUF632) -0.71 0.33 -0.33
101 AT3G63300 FORKED 1 FORKED 1 -0.71 0.33 -0.31
102 AT2G05990 NAD(P)-binding Rossmann-fold superfamily protein ENOYL-ACP REDUCTASE 1, MOSAIC
DEATH 1		 -0.71 0.31 -0.31
103 AT3G57830 Leucine-rich repeat protein kinase family protein -0.71 0.3 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
104 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation -0.72 0.46 -0.44 C0252