AT1G41900 : -
Query Information
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AGICode AT1G41900
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G41900 transposable element gene 1 0.32 -0.31
2 AT5G64710 Putative endonuclease or glycosyl hydrolase -0.74 0.3 -0.32
3 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.29 -0.32
4 AT5G05920 deoxyhypusine synthase deoxyhypusine synthase, embryo sac
development arrest 22		 -0.71 0.3 -0.31
5 AT4G01850 S-adenosylmethionine synthetase 2 AtSAM2, MAT2, S-adenosylmethionine
synthetase 2, S-ADENOSYLMETHIONINE
SYNTHETASE 2		 -0.7 0.31 -0.3
6 AT2G13335 transposable element gene -0.69 0.34 -0.3
7 AT2G05270 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.31 -0.32
8 AT2G20370 Exostosin family protein AtMUR3, KATAMARI 1, MURUS 3 -0.67 0.32 -0.31
9 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 -0.66 0.33 -0.32
10 AT3G19630 Radical SAM superfamily protein -0.66 0.3 -0.32
11 AT3G22810 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.65 0.31 -0.32
12 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.65 0.33 -0.32
13 AT4G36280 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.65 0.31 -0.33
14 AT4G34480 O-Glycosyl hydrolases family 17 protein 0.64 0.33 -0.32
15 AT1G47920 RNI-like superfamily protein -0.64 0.35 -0.31
16 AT1G30580 GTP binding -0.64 0.34 -0.33
17 AT3G60790 F-box family protein 0.64 0.33 -0.32
18 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 0.64 0.33 -0.32
19 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.64 0.32 -0.32
20 AT3G59920 RAB GDP dissociation inhibitor 2 RAB GDP dissociation inhibitor 2,
RAB GDP dissociation inhibitor 2		 -0.64 0.3 -0.31
21 AT4G31340 myosin heavy chain-related -0.64 0.32 -0.3
22 AT2G23310 Rer1 family protein ATRER1C1 -0.64 0.33 -0.3
23 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.64 0.31 -0.31
24 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 -0.63 0.31 -0.3
25 AT1G29150 non-ATPase subunit 9 non-ATPase subunit 9, REGULATORY
PARTICLE NON-ATPASE 6		 -0.63 0.31 -0.34
26 AT4G04180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.3 -0.32
27 AT1G80910 Protein of unknown function (DUF1712) -0.62 0.33 -0.31
28 AT5G10840 Endomembrane protein 70 protein family -0.62 0.33 -0.3
29 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 -0.62 0.33 -0.33
30 AT5G65800 ACC synthase 5 ACC synthase 5, ATACS5,
CYTOKININ-INSENSITIVE 5, ETHYLENE
OVERPRODUCER 2		 -0.62 0.29 -0.3
31 AT3G56110 prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B1 -0.61 0.32 -0.32
32 AT4G16510 YbaK/aminoacyl-tRNA synthetase-associated domain -0.61 0.31 -0.32
33 AT2G15700 transposable element gene 0.61 0.32 -0.32
34 AT5G36230 ARM repeat superfamily protein -0.6 0.29 -0.28
35 AT2G14835 RING/U-box superfamily protein -0.6 0.33 -0.33
36 AT4G03760 transposable element gene -0.6 0.32 -0.32
37 AT5G65070 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 69, FCL4, MADS
AFFECTING FLOWERING 4		 -0.6 0.31 -0.32
38 AT3G30843 transposable element gene -0.6 0.3 -0.3
39 AT2G19550 alpha/beta-Hydrolases superfamily protein 0.6 0.3 -0.31
40 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 -0.6 0.31 -0.31
41 AT3G30845 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.34 -0.32
42 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.31 -0.32
43 ATMG00470 hypothetical protein ORF122A 0.59 0.33 -0.34
44 AT3G06210 ARM repeat superfamily protein 0.59 0.33 -0.31
45 AT2G22520 unknown protein; Has 186 Blast hits to 37 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4;
Plants - 17; Viruses - 0; Other Eukaryotes - 165 (source:
NCBI BLink).		 -0.59 0.31 -0.31
46 AT5G18520 Lung seven transmembrane receptor family protein -0.59 0.32 -0.31
47 AT5G59040 copper transporter 3 copper transporter 3 0.59 0.3 -0.31
48 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA -0.59 0.34 -0.32
49 AT5G20500 Glutaredoxin family protein -0.59 0.3 -0.29
50 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor -0.59 0.28 -0.31
51 AT2G04670 transposable element gene 0.59 0.32 -0.3
52 AT5G58060 SNARE-like superfamily protein ATGP1, ATYKT61, YKT61 -0.59 0.3 -0.32
53 AT1G63110 GPI transamidase subunit PIG-U -0.58 0.28 -0.32
54 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.32 -0.31
55 AT5G51130 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.58 0.33 -0.31
56 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B -0.58 0.28 -0.32
57 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 0.58 0.32 -0.32
58 AT3G42260 transposable element gene 0.58 0.31 -0.32
59 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.58 0.32 -0.33
60 AT4G30150 CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA
processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast
hits to 49 proteins in 21 species: Archae - 0; Bacteria -
2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.58 0.34 -0.32
61 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 0.58 0.31 -0.3
62 AT4G32410 cellulose synthase 1 CELLULOSE SYNTHASE 1, cellulose
synthase 1, RADIALLY SWOLLEN 1		 -0.57 0.32 -0.31
63 AT2G19290 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.29 -0.29
64 AT4G01280 Homeodomain-like superfamily protein 0.57 0.32 -0.31
65 AT4G35985 Senescence/dehydration-associated protein-related 0.57 0.33 -0.3
66 AT1G64910 UDP-Glycosyltransferase superfamily protein -0.57 0.31 -0.29
67 AT3G01530 myb domain protein 57 myb domain protein 57, myb domain
protein 57		 -0.57 0.31 -0.31
68 AT3G07060 NHL domain-containing protein embryo defective 1974 -0.57 0.3 -0.33
69 AT2G05820 transposable element gene 0.57 0.32 -0.31
70 AT5G56490 D-arabinono-1,4-lactone oxidase family protein -0.57 0.31 -0.29
71 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 0.57 0.3 -0.33
72 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain -0.57 0.32 -0.31
73 AT3G18930 RING/U-box superfamily protein 0.57 0.31 -0.32
74 AT2G45580 cytochrome P450, family 76, subfamily C, polypeptide 3 cytochrome P450, family 76,
subfamily C, polypeptide 3		 -0.57 0.3 -0.33
75 AT3G17090 Protein phosphatase 2C family protein -0.57 0.3 -0.31
76 AT3G12530 PSF2 PSF2 -0.56 0.33 -0.34
77 AT4G12640 RNA recognition motif (RRM)-containing protein -0.56 0.32 -0.32
78 AT1G11470 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.33 -0.32
79 AT5G59940 Cysteine/Histidine-rich C1 domain family protein -0.56 0.31 -0.31
80 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 -0.56 0.3 -0.32
81 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 -0.56 0.3 -0.35
82 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family 0.56 0.33 -0.3
83 AT3G31340 transposable element gene 0.56 0.3 -0.33
84 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 -0.56 0.35 -0.3
85 AT5G47150 YDG/SRA domain-containing protein -0.56 0.32 -0.3
86 AT4G09520 Cofactor-independent phosphoglycerate mutase -0.55 0.32 -0.31
87 AT4G02450 HSP20-like chaperones superfamily protein -0.55 0.33 -0.29
88 AT1G80330 gibberellin 3-oxidase 4 ARABIDOPSIS THALIANA GIBBERELLIN
3-OXIDASE 4, gibberellin 3-oxidase
4		 0.55 0.31 -0.3
89 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 -0.55 0.29 -0.32
90 AT3G13060 evolutionarily conserved C-terminal region 5 evolutionarily conserved
C-terminal region 5		 -0.55 0.31 -0.32
91 AT3G27390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast
hits to 99 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.35 -0.31
92 AT2G15640 F-box family protein 0.55 0.33 -0.3
93 AT3G20990 transposable element gene -0.55 0.32 -0.31
94 AT5G19130 GPI transamidase component family protein / Gaa1-like
family protein		 -0.55 0.33 -0.33
95 AT5G11250 Disease resistance protein (TIR-NBS-LRR class) 0.55 0.29 -0.31
96 AT4G20490 transposable element gene 0.55 0.33 -0.32
97 AT5G42955 Protein of unknown function (DUF784) 0.55 0.32 -0.33
98 AT3G17900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 45
Blast hits to 44 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.55 0.32 -0.32
99 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E 0.54 0.32 -0.32
100 AT3G15220 Protein kinase superfamily protein 0.54 0.35 -0.33
101 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 0.54 0.31 -0.33
102 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.32 -0.32
103 AT3G07250 nuclear transport factor 2 (NTF2) family protein / RNA
recognition motif (RRM)-containing protein		 0.53 0.33 -0.34
104 AT1G69790 Protein kinase superfamily protein 0.53 0.33 -0.31
105 AT5G39785 Protein of unknown function (DUF1666) 0.53 0.33 -0.31
106 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 0.53 0.3 -0.32
107 AT4G19420 Pectinacetylesterase family protein 0.53 0.33 -0.32
108 AT4G27670 heat shock protein 21 heat shock protein 21 0.53 0.34 -0.3
109 AT3G17230 invertase/pectin methylesterase inhibitor family protein 0.52 0.31 -0.32
110 AT2G10050 transposable element gene 0.52 0.33 -0.33
111 AT4G29770 Target of trans acting-siR480/255. 0.51 0.31 -0.3
112 AT3G19040 histone acetyltransferase of the TAFII250 family 2 histone acetyltransferase of the
TAFII250 family 2, TBP-ASSOCIATED
FACTOR 1, TBP-ASSOCIATED FACTOR 1B		 0.51 0.31 -0.32
113 AT1G65990 type 2 peroxiredoxin-related / thiol specific antioxidant /
mal allergen family protein		 0.5 0.3 -0.32
114 AT4G09840 unknown protein; Has 25 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 4;
Plants - 9; Viruses - 3; Other Eukaryotes - 5 (source: NCBI
BLink).		 0.5 0.32 -0.31
115 AT3G28620 Zinc finger, C3HC4 type (RING finger) family protein 0.5 0.3 -0.31
116 AT3G42060 myosin heavy chain-related 0.5 0.3 -0.28
117 AT3G03180 Got1/Sft2-like vescicle transport protein family 0.5 0.33 -0.31
118 AT1G07380 Neutral/alkaline non-lysosomal ceramidase 0.5 0.32 -0.31