AT1G18870 : ARABIDOPSIS ISOCHORISMATE SYNTHASE 2

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AGICode	AT1G18870
Description	isochorismate synthase 2

Gene information

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	Gene Code	Description / Information	Gene name	Correlation				link
	Gene Code	Description / Information	Gene name	pcc	2.5%	97.5%	PPI	link
1	AT1G18870	isochorismate synthase 2	ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, isochorismate synthase 2	1	0.3	-0.33
2	AT4G02630	Protein kinase superfamily protein		0.8	0.31	-0.33
3	AT1G29395	COLD REGULATED 314 INNER MEMBRANE 1	COLD REGULATED 314 THYLAKOID MEMBRANE 1, COLD REGULATED 314 INNER MEMBRANE 1, cold regulated 414 thylakoid membrane 1	0.79	0.31	-0.31
4	AT5G15630	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	COBRA-LIKE4, IRREGULAR XYLEM 6	0.78	0.32	-0.31
5	AT2G22240	myo-inositol-1-phosphate synthase 2	INOSITOL 3-PHOSPHATE SYNTHASE 2, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2, myo-inositol-1-phosphate synthase 2	0.78	0.32	-0.3
6	AT3G57550	guanylate kinase	guanylate kinase, GUANYLATE KINAS 2	-0.78	0.3	-0.31
7	AT3G12600	nudix hydrolase homolog 16	nudix hydrolase homolog 16, nudix hydrolase homolog 16	-0.76	0.32	-0.33
8	AT5G62000	auxin response factor 2	ARF1-BINDING PROTEIN, auxin response factor 2, HLS1 SUPPRESSOR, ORESARA 14	0.76	0.31	-0.34
9	AT5G65650	Protein of unknown function (DUF1195)		-0.75	0.33	-0.33
10	AT5G50800	Nodulin MtN3 family protein	AtSWEET13, SWEET13	0.75	0.31	-0.3
11	AT2G40460	Major facilitator superfamily protein		0.75	0.31	-0.3
12	AT4G18270	translocase 11	ARABIDOPSIS THALIANA TRANSLOCASE 11, translocase 11	0.75	0.33	-0.3
13	AT2G38960	endoplasmic reticulum oxidoreductins 2	endoplasmic reticulum oxidoreductins 2, endoplasmic reticulum oxidoreductins 2	-0.74	0.32	-0.31
14	AT3G19620	Glycosyl hydrolase family protein		0.74	0.3	-0.3
15	AT5G57610	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain		0.74	0.29	-0.31
16	AT4G32940	gamma vacuolar processing enzyme	gamma vacuolar processing enzyme, GAMMAVPE	0.74	0.3	-0.33
17	AT5G20820	SAUR-like auxin-responsive protein family		-0.74	0.33	-0.3
18	AT3G01790	Ribosomal protein L13 family protein		-0.74	0.31	-0.34
19	AT3G25120	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein		-0.73	0.31	-0.3
20	AT2G44230	Plant protein of unknown function (DUF946)		0.73	0.32	-0.32
21	AT1G75030	thaumatin-like protein 3	thaumatin-like protein 3, thaumatin-like protein 3	0.73	0.32	-0.31
22	AT5G26110	Protein kinase superfamily protein		-0.73	0.33	-0.3
23	AT1G51090	Heavy metal transport/detoxification superfamily protein		0.73	0.29	-0.32
24	AT1G64970	gamma-tocopherol methyltransferase	gamma-tocopherol methyltransferase, TMT1, VITAMIN E DEFICIENT 4	0.73	0.3	-0.31
25	AT2G44270	repressor of lrx1	repressor of lrx1	-0.73	0.29	-0.32
26	AT3G07270	GTP cyclohydrolase I		-0.72	0.29	-0.32
27	AT1G04590	BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		-0.72	0.31	-0.32
28	AT1G29390	cold regulated 314 thylakoid membrane 2	cold regulated 314 thylakoid membrane 2, COLD REGULATED 314 INNER MEMBRANE 2	0.72	0.29	-0.32
29	AT2G42540	cold-regulated 15a	COR15, cold-regulated 15a	0.72	0.3	-0.32
30	AT2G28660	Chloroplast-targeted copper chaperone protein		-0.72	0.31	-0.31
31	AT4G35300	tonoplast monosaccharide transporter2	tonoplast monosaccharide transporter2	0.72	0.31	-0.3
32	AT1G64370	unknown protein; Has 773 Blast hits to 375 proteins in 118 species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi - 108; Plants - 31; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).		0.72	0.3	-0.33
33	AT5G14800	pyrroline-5- carboxylate (P5C) reductase	AT-P5C1, PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE, EMBRYO DEFECTIVE 2772, pyrroline-5- carboxylate (P5C) reductase	-0.72	0.31	-0.31
34	AT3G13580	Ribosomal protein L30/L7 family protein		-0.71	0.3	-0.33
35	AT3G07360	plant U-box 9	ARABIDOPSIS THALIANA PLANT U-BOX 9, plant U-box 9	0.71	0.3	-0.31
36	AT3G56050	Protein kinase family protein		0.71	0.3	-0.3
37	AT4G00710	BR-signaling kinase 3	BR-signaling kinase 3	-0.71	0.33	-0.33
38	AT1G64690	branchless trichome	BRANCHLESS TRICHOMES	0.71	0.32	-0.31
39	AT3G10090	Nucleic acid-binding, OB-fold-like protein		-0.71	0.32	-0.29
40	AT3G22750	Protein kinase superfamily protein		-0.71	0.3	-0.32
41	AT1G74270	Ribosomal protein L35Ae family protein		-0.71	0.33	-0.31
42	AT3G13040	myb-like HTH transcriptional regulator family protein		0.71	0.32	-0.31
43	AT1G15250	Zinc-binding ribosomal protein family protein		-0.71	0.3	-0.32
44	AT5G62130	Per1-like family protein		0.71	0.3	-0.33
45	AT5G53980	homeobox protein 52	homeobox protein 52, homeobox protein 52	-0.71	0.32	-0.3
46	AT5G43150	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		0.71	0.32	-0.31
47	AT4G02420	Concanavalin A-like lectin protein kinase family protein		0.7	0.3	-0.34
48	AT4G18800	RAB GTPase homolog A1D	ATHSGBP, ATRAB11B, RAB GTPase homolog A1D, RAB GTPase homolog A1D	-0.7	0.31	-0.32
49	AT5G51890	Peroxidase superfamily protein		0.7	0.32	-0.31
50	AT2G18400	ribosomal protein L6 family protein		-0.7	0.31	-0.32
51	AT4G11290	Peroxidase superfamily protein		-0.7	0.35	-0.34
52	AT3G45680	Major facilitator superfamily protein		0.7	0.33	-0.33
53	AT1G51140	basic helix-loop-helix (bHLH) DNA-binding superfamily protein		0.7	0.32	-0.32
54	AT2G27330	RNA-binding (RRM/RBD/RNP motifs) family protein		-0.7	0.31	-0.31
55	AT3G04920	Ribosomal protein S24e family protein		-0.69	0.3	-0.33
56	AT2G46070	mitogen-activated protein kinase 12	ATMPK12, MAPK12, mitogen-activated protein kinase 12	0.69	0.29	-0.31
57	AT2G17440	plant intracellular ras group-related LRR 5	plant intracellular ras group-related LRR 5	-0.69	0.33	-0.33
58	AT3G05880	Low temperature and salt responsive protein family	RARE-COLD-INDUCIBLE 2A	0.69	0.33	-0.33
59	AT5G61810	Mitochondrial substrate carrier family protein	ATP/phosphate carrier 1	0.69	0.32	-0.3
60	AT1G56600	galactinol synthase 2	galactinol synthase 2, galactinol synthase 2	0.69	0.33	-0.29
61	AT2G44790	uclacyanin 2	uclacyanin 2	-0.69	0.31	-0.31
62	AT3G04230	Ribosomal protein S5 domain 2-like superfamily protein		-0.68	0.3	-0.31
63	AT2G42530	cold regulated 15b	cold regulated 15b	0.68	0.31	-0.28
64	AT2G19590	ACC oxidase 1	ACC oxidase 1, ATACO1	-0.68	0.31	-0.33
65	AT5G60720	Protein of unknown function, DUF547		0.68	0.31	-0.31
66	AT2G32800	protein kinase family protein	AP4.3A	0.68	0.32	-0.31
67	AT3G61100	Putative endonuclease or glycosyl hydrolase		-0.68	0.33	-0.31
68	AT5G63650	SNF1-related protein kinase 2.5	SNRK2-5, SNF1-related protein kinase 2.5, SNF1-RELATED PROTEIN KINASE 2H	-0.68	0.31	-0.33
69	AT5G53160	regulatory components of ABA receptor 3	PYR1-like 8, regulatory components of ABA receptor 3	-0.68	0.33	-0.28
70	AT2G39450	Cation efflux family protein	ATMTP11, MTP11	0.68	0.3	-0.31
71	AT5G57040	Lactoylglutathione lyase / glyoxalase I family protein		0.68	0.32	-0.32
72	AT1G20430	unknown protein; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.67	0.32	-0.3
73	AT5G05450	P-loop containing nucleoside triphosphate hydrolases superfamily protein		-0.67	0.31	-0.3
74	AT1G14040	EXS (ERD1/XPR1/SYG1) family protein		-0.67	0.3	-0.32
75	AT5G17420	Cellulose synthase family protein	ATCESA7, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, IRREGULAR XYLEM 3, MURUS 10	0.67	0.34	-0.3
76	AT4G33810	Glycosyl hydrolase superfamily protein		0.67	0.31	-0.3
77	AT4G34770	SAUR-like auxin-responsive protein family		-0.67	0.29	-0.27
78	AT3G15780	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.67	0.35	-0.32
79	AT3G54650	RNI-like superfamily protein	FBL17	-0.67	0.33	-0.32
80	AT1G44830	Integrase-type DNA-binding superfamily protein		-0.67	0.32	-0.34
81	AT5G01210	HXXXD-type acyl-transferase family protein		-0.67	0.29	-0.33
82	AT5G62000	auxin response factor 2	ARF1-BINDING PROTEIN, auxin response factor 2, HLS1 SUPPRESSOR, ORESARA 14	0.67	0.3	-0.32
83	AT1G61660	basic helix-loop-helix (bHLH) DNA-binding superfamily protein		0.67	0.31	-0.34
84	AT1G24735	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein		0.67	0.34	-0.33
85	AT4G16750	Integrase-type DNA-binding superfamily protein		0.67	0.34	-0.3
86	AT3G19340	Protein of unknown function (DUF3754)		0.66	0.32	-0.32
87	AT3G50220	Protein of unknown function (DUF579)	IRREGULAR XYLEM 15	0.66	0.3	-0.3
88	AT2G16990	Major facilitator superfamily protein		0.66	0.31	-0.33
89	AT5G03670	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink).		-0.66	0.33	-0.31
90	AT5G16470	zinc finger (C2H2 type) family protein		-0.66	0.34	-0.31
91	AT3G02130	receptor-like protein kinase 2	clv3 peptide insensitive 1, receptor-like protein kinase 2, TOADSTOOL 2	0.66	0.32	-0.31
92	AT4G02230	Ribosomal protein L19e family protein		-0.66	0.3	-0.32
93	AT3G57540	Remorin family protein		0.66	0.32	-0.32
94	AT2G42850	cytochrome P450, family 718	cytochrome P450, family 718	-0.66	0.3	-0.33
95	AT1G69690	TCP family transcription factor	AtTCP15, TEOSINTE BRANCHED1/CYCLOIDEA/PCF 15	0.66	0.33	-0.3
96	AT5G39850	Ribosomal protein S4		-0.66	0.32	-0.3
97	AT1G60470	galactinol synthase 4	galactinol synthase 4, galactinol synthase 4	0.66	0.32	-0.31
98	AT4G37660	Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein		-0.66	0.31	-0.32
99	AT5G37180	sucrose synthase 5	ARABIDOPSIS THALIANA SUCROSE SYNTHASE 5, sucrose synthase 5	0.65	0.33	-0.31
100	AT3G50070	CYCLIN D3;3	CYCLIN D3;3	-0.65	0.3	-0.32
101	AT2G19000	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.65	0.33	-0.31
102	AT5G52660	Homeodomain-like superfamily protein		0.65	0.31	-0.3
103	AT2G34900	Transcription factor GTE6	GTE01, GLOBAL TRANSCRIPTION FACTOR GROUP E1, IMBIBITION-INDUCIBLE 1	-0.65	0.3	-0.29
104	AT2G38790	unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		0.65	0.29	-0.3
105	AT3G53740	Ribosomal protein L36e family protein		-0.65	0.3	-0.3
106	AT4G23990	cellulose synthase like G3	ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE G3, cellulose synthase like G3	0.65	0.31	-0.31
107	AT3G22320	Eukaryotic rpb5 RNA polymerase subunit family protein	ATRPABC24.3, NRPB5, NRPD5, RNA POLYMERASE II FIFTH LARGEST SUBUNIT, A	-0.65	0.33	-0.31
108	AT4G26110	nucleosome assembly protein1;1	ARABIDOPSIS THALIANA NUCLEOSOME ASSEMLY PROTEIN 1;1, nucleosome assembly protein1;1	-0.65	0.32	-0.32
109	AT3G14067	Subtilase family protein		0.64	0.32	-0.33
110	AT1G31850	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein		-0.64	0.29	-0.31
111	AT1G69210	Uncharacterised protein family UPF0090		-0.64	0.32	-0.32
112	AT1G01100	60S acidic ribosomal protein family		-0.64	0.34	-0.32
113	AT2G35900	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.64	0.3	-0.31
114	AT1G20850	xylem cysteine peptidase 2	xylem cysteine peptidase 2	0.64	0.29	-0.31
115	AT5G19180	E1 C-terminal related 1	E1 C-terminal related 1	-0.64	0.33	-0.31
116	AT5G27700	Ribosomal protein S21e		-0.64	0.3	-0.33
117	AT4G24940	SUMO-activating enzyme 1A	AT-SAE1-1, SUMO-ACTIVATING ENZYME 1A, SUMO-activating enzyme 1A	-0.64	0.31	-0.31
118	AT5G06570	alpha/beta-Hydrolases superfamily protein		-0.64	0.31	-0.34
119	AT5G23750	Remorin family protein		0.63	0.31	-0.3
120	AT5G15610	Proteasome component (PCI) domain protein		-0.63	0.32	-0.32
121	AT2G34300	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein		-0.63	0.32	-0.31
122	AT3G20730	Tetratricopeptide repeat (TPR)-like superfamily protein		-0.63	0.33	-0.3
123	AT3G59900	auxin-regulated gene involved in organ size	AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE	-0.63	0.32	-0.31
124	AT3G21510	histidine-containing phosphotransmitter 1	histidine-containing phosphotransmitter 1	-0.63	0.32	-0.31
125	AT3G49640	Aldolase-type TIM barrel family protein		-0.63	0.32	-0.3
126	AT1G27435	unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.63	0.3	-0.32
127	AT1G70900	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits to 57 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.63	0.32	-0.32
128	AT5G56300	gibberellic acid methyltransferase 2	gibberellic acid methyltransferase 2	-0.63	0.33	-0.32
129	AT2G34520	mitochondrial ribosomal protein S14	mitochondrial ribosomal protein S14	-0.63	0.31	-0.3
130	AT2G23930	probable small nuclear ribonucleoprotein G	probable small nuclear ribonucleoprotein G	-0.63	0.31	-0.33
131	AT3G62940	Cysteine proteinases superfamily protein		-0.63	0.31	-0.33
132	AT5G44670	Domain of unknown function (DUF23)		0.63	0.31	-0.31
133	AT5G19340	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink).		-0.62	0.34	-0.3
134	AT4G15570	P-loop containing nucleoside triphosphate hydrolases superfamily protein	MAGATAMA 3	-0.62	0.34	-0.31
135	AT3G06930	protein arginine methyltransferase 4B	ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 4B, protein arginine methyltransferase 4B	-0.62	0.33	-0.31
136	AT1G12990	beta-1,4-N-acetylglucosaminyltransferase family protein		0.62	0.31	-0.32
137	AT5G41810	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink).		0.62	0.32	-0.32
138	AT5G59160	type one serine/threonine protein phosphatase 2	PROTOPORPHYRINOGEN OXIDASE, type one serine/threonine protein phosphatase 2	-0.62	0.34	-0.31
139	AT4G36930	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	SPATULA	-0.62	0.32	-0.32
140	AT2G14900	Gibberellin-regulated family protein		-0.62	0.3	-0.32
141	AT5G38070	RING/FYVE/PHD zinc finger superfamily protein		0.62	0.32	-0.33
142	AT3G53980	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein		0.62	0.34	-0.33
143	AT1G03010	Phototropic-responsive NPH3 family protein		-0.62	0.33	-0.31
144	AT3G56260	unknown protein; Has 20 Blast hits to 19 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).		0.61	0.32	-0.31
145	AT3G16920	chitinase-like protein 2	ATCTL2, chitinase-like protein 2	0.61	0.32	-0.32
146	AT2G16410	transposable element gene		0.61	0.31	-0.32
147	AT5G12280	SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein		0.61	0.3	-0.32
148	AT1G75410	BEL1-like homeodomain 3	BEL1-like homeodomain 3	0.61	0.3	-0.29
149	AT4G23780	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23770.1); Has 51 Blast hits to 49 proteins in 22 species: Archae - 0; Bacteria - 9; Metazoa - 12; Fungi - 0; Plants - 14; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink).		0.61	0.33	-0.35
150	AT2G38740	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein		0.61	0.31	-0.32

Metabolite information

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	CID	Metabolite name			Pathway Information	Correlation				link
	CID	Compound name	Stereochemistry	Aracyc name	Pathway Information	pcc	2.5%	97.5%	PPI	link
151	C0225	Raffinose	D-(+)-Raffinose	Raffinose	ajugose biosynthesis II (galactinol-independent), stachyose biosynthesis, stachyose degradation	0.78	0.45	-0.42
152	C0266	Xylose	D-Xylose	D-Xylose	xylose degradation I	0.75	0.44	-0.43
153	C0111	Hexa-2-O-glycerol-β-galactopyranoside	Hexa-2-O-gllycerol-β-D-galactopyranoside	-	-	0.73	0.44	-0.44
154	C0098	Glucose	D-Glucose	alpha-D-glucose; beta-D-glucose	trehalose degradation II (trehalase), indole glucosinolate breakdown (active in intact plant cell), coumarin biosynthesis (via 2-coumarate), glucosinolate biosynthesis from tryptophan, sinapate ester biosynthesis, GDP-glucose biosynthesis, coniferin metabolism, melibiose degradation, indole glucosinolate breakdown (insect chewing induced)	0.62	0.32	-0.3

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