AGICode | AT1G63530 |
Description | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G63540.1); Has 10212 Blast hits to 4024 proteins in 434 species: Archae - 1; Bacteria - 1259; Metazoa - 3608; Fungi - 2247; Plants - 291; Viruses - 90; Other Eukaryotes - 2716 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G63530 | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G63540.1); Has 10212 Blast hits to 4024 proteins in 434 species: Archae - 1; Bacteria - 1259; Metazoa - 3608; Fungi - 2247; Plants - 291; Viruses - 90; Other Eukaryotes - 2716 (source: NCBI BLink). |
1 | 0.35 | -0.31 | |||
2 | AT3G60390 | homeobox-leucine zipper protein 3 | homeobox-leucine zipper protein 3 | -0.72 | 0.32 | -0.31 | ||
3 | AT3G15095 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 9762 Blast hits to 6439 proteins in 764 species: Archae - 77; Bacteria - 1339; Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131; Other Eukaryotes - 3849 (source: NCBI BLink). |
high chlorophyll fluorescence 243 | -0.71 | 0.33 | -0.32 | ||
4 | AT3G51440 | Calcium-dependent phosphotriesterase superfamily protein | 0.7 | 0.33 | -0.29 | |||
5 | AT1G44800 | nodulin MtN21 /EamA-like transporter family protein | 0.69 | 0.3 | -0.31 | |||
6 | AT5G49100 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06868.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.68 | 0.32 | -0.32 | |||
7 | AT2G01930 | basic pentacysteine1 | BASIC PENTACYSTEINE1, BBR, basic pentacysteine1 |
-0.68 | 0.34 | -0.33 | ||
8 | AT4G13640 | Homeodomain-like superfamily protein | unfertilized embryo sac 16 | -0.68 | 0.29 | -0.32 | ||
9 | AT5G56250 | hapless 8 | HAPLESS 8 | 0.68 | 0.31 | -0.32 | ||
10 | AT4G01430 | nodulin MtN21 /EamA-like transporter family protein | 0.68 | 0.35 | -0.3 | |||
11 | AT2G44150 | histone-lysine N-methyltransferase ASHH3 | histone-lysine N-methyltransferase ASHH3, SET DOMAIN-CONTAINING PROTEIN 7 |
-0.67 | 0.32 | -0.33 | ||
12 | AT1G14685 | basic pentacysteine 2 | BASIC PENTACYSTEINE 2, BBR/BPC2, basic pentacysteine 2 |
-0.67 | 0.31 | -0.32 | ||
13 | AT3G17160 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 54259 Blast hits to 25265 proteins in 1209 species: Archae - 350; Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants - 3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI BLink). |
-0.65 | 0.32 | -0.31 | |||
14 | AT3G47420 | phosphate starvation-induced gene 3 | Glycerol-3-phosphate permease 1, phosphate starvation-induced gene 3, Glycerol-3-phosphate permease 1, phosphate starvation-induced gene 3 |
0.65 | 0.31 | -0.31 | ||
15 | AT3G03590 | SWIB/MDM2 domain superfamily protein | -0.65 | 0.32 | -0.34 | |||
16 | AT5G04590 | sulfite reductase | sulfite reductase | 0.65 | 0.31 | -0.33 | ||
17 | AT4G00900 | ER-type Ca2+-ATPase 2 | ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 2, ER-type Ca2+-ATPase 2 |
0.64 | 0.34 | -0.3 | ||
18 | AT5G25820 | Exostosin family protein | 0.64 | 0.32 | -0.33 | |||
19 | AT1G03470 | Kinase interacting (KIP1-like) family protein | -0.64 | 0.33 | -0.32 | |||
20 | AT1G34760 | general regulatory factor 11 | GF14 OMICRON, general regulatory factor 11, ROOT HAIR SPECIFIC 5 |
-0.64 | 0.3 | -0.31 | ||
21 | AT1G43910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.64 | 0.32 | -0.31 | |||
22 | AT5G08520 | Duplicated homeodomain-like superfamily protein | -0.63 | 0.32 | -0.31 | |||
23 | AT4G00955 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.32 | -0.27 | |||
24 | AT3G04530 | phosphoenolpyruvate carboxylase kinase 2 | ATPPCK2, PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2, phosphoenolpyruvate carboxylase kinase 2 |
0.63 | 0.33 | -0.33 | ||
25 | AT3G18160 | peroxin 3-1 | peroxin 3-1 | -0.63 | 0.3 | -0.33 | ||
26 | AT1G72830 | nuclear factor Y, subunit A3 | ATHAP2C, HAP2C, nuclear factor Y, subunit A3 |
0.62 | 0.3 | -0.33 | ||
27 | AT2G41700 | ATP-binding cassette A1 | ATP-binding cassette A1, Arabidopsis thaliana ATP-binding cassette A1 |
0.62 | 0.3 | -0.32 | ||
28 | AT1G10380 | Putative membrane lipoprotein | -0.62 | 0.29 | -0.31 | |||
29 | AT1G69310 | WRKY DNA-binding protein 57 | ATWRKY57, WRKY DNA-binding protein 57 |
0.62 | 0.32 | -0.32 | ||
30 | AT2G45530 | RING/U-box superfamily protein | -0.62 | 0.31 | -0.32 | |||
31 | AT5G15790 | RING/U-box superfamily protein | -0.61 | 0.31 | -0.32 | |||
32 | AT1G67340 | HCP-like superfamily protein with MYND-type zinc finger | -0.61 | 0.3 | -0.31 | |||
33 | AT5G25830 | GATA transcription factor 12 | GATA transcription factor 12 | -0.6 | 0.3 | -0.32 | ||
34 | AT5G64570 | beta-D-xylosidase 4 | ARABIDOPSIS THALIANA BETA-D-XYLOSIDASE 4, beta-D-xylosidase 4 |
0.6 | 0.34 | -0.32 | ||
35 | AT3G27810 | myb domain protein 21 | myb domain protein 21, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, myb domain protein 21 |
0.6 | 0.33 | -0.33 | ||
36 | AT3G45980 | Histone superfamily protein | HISTONE H2B, HTB9 | -0.6 | 0.3 | -0.3 | ||
37 | AT4G10925 | Nuclear transport factor 2 (NTF2) family protein | -0.6 | 0.29 | -0.3 | |||
38 | AT5G61040 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.59 | 0.3 | -0.32 | |||
39 | AT3G10720 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.59 | 0.3 | -0.31 | |||
40 | AT5G12050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.59 | 0.31 | -0.32 | |||
41 | AT5G05670 | signal recognition particle binding | -0.59 | 0.34 | -0.31 | |||
42 | AT5G56140 | RNA-binding KH domain-containing protein | -0.59 | 0.3 | -0.29 | |||
43 | AT5G15330 | SPX domain gene 4 | ARABIDOPSIS THALIANA SPX DOMAIN GENE 4, SPX domain gene 4 |
-0.58 | 0.32 | -0.31 | ||
44 | AT3G54610 | histone acetyltransferase of the GNAT family 1 | BIG TOP, general control non-repressible 5, HAC3, HAG01, histone acetyltransferase of the GNAT family 1, HISTONE ACETYLTRANSFERASE 1 |
0.58 | 0.31 | -0.32 | ||
45 | AT5G59450 | GRAS family transcription factor | -0.58 | 0.32 | -0.32 | |||
46 | AT1G49840 | Protein of unknown function (DUF620) | -0.58 | 0.31 | -0.28 | |||
47 | AT3G24630 | unknown protein; Has 5348 Blast hits to 3182 proteins in 353 species: Archae - 0; Bacteria - 481; Metazoa - 1959; Fungi - 405; Plants - 180; Viruses - 10; Other Eukaryotes - 2313 (source: NCBI BLink). |
-0.58 | 0.32 | -0.3 | |||
48 | AT5G24310 | ABL interactor-like protein 3 | ABL interactor-like protein 3 | -0.57 | 0.32 | -0.31 | ||
49 | AT5G36250 | Protein phosphatase 2C family protein | -0.57 | 0.35 | -0.31 | |||
50 | AT5G66620 | DA1-related protein 6 | DA1-related protein 6 | 0.57 | 0.3 | -0.31 | ||
51 | AT2G42490 | Copper amine oxidase family protein | 0.57 | 0.32 | -0.32 | |||
52 | AT2G34490 | cytochrome P450, family 710, subfamily A, polypeptide 2 | cytochrome P450, family 710, subfamily A, polypeptide 2 |
0.56 | 0.3 | -0.34 | ||
53 | AT3G05675 | BTB/POZ domain-containing protein | -0.56 | 0.32 | -0.32 | |||
54 | AT5G28020 | cysteine synthase D2 | CYSTEINE SYNTHASE D2, cysteine synthase D2 |
0.55 | 0.32 | -0.3 | ||
55 | AT5G55810 | nicotinate/nicotinamide mononucleotide adenyltransferase | nicotinate/nicotinamide mononucleotide adenyltransferase, nicotinate/nicotinamide mononucleotide adenyltransferase |
0.55 | 0.3 | -0.31 | ||
56 | AT1G12400 | Nucleotide excision repair, TFIIH, subunit TTDA | 0.54 | 0.31 | -0.33 | |||
57 | AT1G16810 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1754, eukaryotic (InterPro:IPR013865); Has 395 Blast hits to 394 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 181; Fungi - 91; Plants - 65; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). |
-0.54 | 0.3 | -0.33 | |||
58 | AT4G09420 | Disease resistance protein (TIR-NBS class) | 0.54 | 0.34 | -0.32 | |||
59 | AT4G20000 | VQ motif-containing protein | 0.54 | 0.31 | -0.32 | |||
60 | AT3G20520 | SHV3-like 3 | Glycerophosphodiester phosphodiesterase (GDPD) like 5, SHV3-like 3 |
0.54 | 0.31 | -0.32 | ||
61 | AT5G55550 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.54 | 0.32 | -0.34 | |||
62 | AT4G18710 | Protein kinase superfamily protein | SHAGGY-LIKE KINASE 21, BRASSINOSTEROID-INSENSITIVE 2, DWARF 12, SHAGGY-LIKE KINASE 21, ULTRACURVATA 1 |
-0.54 | 0.33 | -0.32 | ||
63 | AT1G75800 | Pathogenesis-related thaumatin superfamily protein | -0.54 | 0.32 | -0.32 | |||
64 | AT5G27210 | Protein of unknown function, transmembrane-40 | -0.54 | 0.31 | -0.32 | |||
65 | AT5G02840 | LHY/CCA1-like 1 | LHY/CCA1-like 1 | -0.53 | 0.31 | -0.32 | ||
66 | AT1G29050 | TRICHOME BIREFRINGENCE-LIKE 38 | TRICHOME BIREFRINGENCE-LIKE 38 | 0.53 | 0.31 | -0.34 | ||
67 | AT4G09150 | T-complex protein 11 | -0.53 | 0.33 | -0.31 | |||
68 | AT3G50660 | Cytochrome P450 superfamily protein | CLOMAZONE-RESISTANT, CYTOCHROME P450 90B1, DWARF 4, PARTIALLY SUPPRESSING COI1 INSENSITIVITY TO JA 1, SHADE AVOIDANCE 1, SUPPRESSOR OF NPH4 2 |
-0.53 | 0.3 | -0.32 | ||
69 | AT4G14560 | indole-3-acetic acid inducible | AUXIN RESISTANT 5, indole-3-acetic acid inducible |
-0.53 | 0.31 | -0.32 | ||
70 | AT4G08290 | nodulin MtN21 /EamA-like transporter family protein | 0.53 | 0.33 | -0.31 | |||
71 | AT3G46020 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.53 | 0.31 | -0.31 | |||
72 | AT3G09670 | Tudor/PWWP/MBT superfamily protein | -0.53 | 0.35 | -0.32 | |||
73 | AT3G05690 | nuclear factor Y, subunit A2 | HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 2B, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 2B, nuclear factor Y, subunit A2, UNFERTILIZED EMBRYO SAC 8 |
0.53 | 0.31 | -0.31 | ||
74 | AT1G49780 | plant U-box 26 | plant U-box 26 | -0.53 | 0.31 | -0.3 | ||
75 | AT5G67190 | DREB and EAR motif protein 2 | DREB and EAR motif protein 2 | -0.52 | 0.31 | -0.29 | ||
76 | AT3G60830 | actin-related protein 7 | ARP7, actin-related protein 7, actin-related protein 7 |
-0.52 | 0.31 | -0.34 | ||
77 | AT3G30230 | myosin heavy chain-related | -0.52 | 0.31 | -0.29 |