AT1G63500 : -
Query Information
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AGICode AT1G63500
Description Protein kinase protein with tetratricopeptide repeat domain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G63500 Protein kinase protein with tetratricopeptide repeat domain 1 0.29 -0.31
2 AT5G64290 dicarboxylate transport 2.1 DCT, dicarboxylate transport 2.1 0.74 0.32 -0.31
3 AT1G26850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.31 -0.32
4 AT1G14560 Mitochondrial substrate carrier family protein 0.68 0.32 -0.31
5 AT5G45500 RNI-like superfamily protein 0.67 0.33 -0.32
6 AT4G33650 dynamin-related protein 3A ARABIDOPSIS DYNAMIN-LIKE 2,
ABERRANT PEROXISOME MORPHOLOGY 1,
dynamin-related protein 3A		 0.67 0.33 -0.32
7 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.66 0.31 -0.32
8 AT3G08670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast
hits to 29827 proteins in 1356 species: Archae - 46;
Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants -
2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI
BLink).		 0.66 0.31 -0.32
9 AT2G03740 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 0.66 0.33 -0.32
10 AT5G49500 Signal recognition particle, SRP54 subunit protein -0.65 0.3 -0.3
11 AT2G41960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast
hits to 7260 proteins in 458 species: Archae - 17; Bacteria
- 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses
- 38; Other Eukaryotes - 4487 (source: NCBI BLink).		 0.65 0.29 -0.32
12 AT2G07170 ARM repeat superfamily protein -0.64 0.33 -0.3
13 AT3G57890 Tubulin binding cofactor C domain-containing protein 0.64 0.34 -0.31
14 AT4G31880 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Tudor/PWWP/MBT
superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast
hits to 70781 proteins in 2973 species: Archae - 289;
Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants -
6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink).		 0.64 0.32 -0.3
15 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.64 0.32 -0.32
16 AT5G47430 DWNN domain, a CCHC-type zinc finger 0.63 0.31 -0.33
17 AT1G06530 Tropomyosin-related peroxisomal and mitochondrial
division factor 2		 0.62 0.32 -0.3
18 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.62 0.32 -0.32
19 AT1G12790 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like
(InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.33 -0.3
20 AT2G20190 CLIP-associated protein CLIP-ASSOCIATED PROTEIN,
CLIP-associated protein		 0.62 0.32 -0.33
21 AT5G33340 Eukaryotic aspartyl protease family protein CONSTITUTIVE DISEASE RESISTANCE 1 0.61 0.31 -0.32
22 AT5G08200 peptidoglycan-binding LysM domain-containing protein 0.61 0.31 -0.32
23 AT2G42520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.31 -0.32
24 AT3G32180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32160.1); Has 37 Blast hits
to 25 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.3 -0.3
25 AT1G74870 RING/U-box superfamily protein 0.6 0.31 -0.33
26 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.6 0.34 -0.31
27 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 0.6 0.31 -0.33
28 AT2G32750 Exostosin family protein 0.6 0.34 -0.34
29 AT5G28290 NIMA-related kinase 3 NIMA-related kinase 3,
NIMA-related kinase 3		 0.59 0.32 -0.31
30 AT5G19900 PRLI-interacting factor, putative 0.59 0.33 -0.32
31 AT3G08730 protein-serine kinase 1 ARABIDOPSIS THALIANA
PROTEIN-SERINE KINASE 1,
ARABIDOPSIS THALIANA
PROTEIN-SERINE KINASE 6, ATS6K1,
protein-serine kinase 1,
ROTEIN-SERINE KINASE 6, P70
RIBOSOMAL S6 KINASE		 0.59 0.32 -0.32
32 AT1G63970 isoprenoid F isoprenoid F,
2C-METHYL-D-ERYTHRITOL
2,4-CYCLODIPHOSPHATE SYNTHASE		 0.59 0.33 -0.32
33 AT3G10540 3-phosphoinositide-dependent protein kinase 0.59 0.31 -0.31
34 AT4G33180 alpha/beta-Hydrolases superfamily protein 0.59 0.3 -0.33
35 AT5G62320 myb domain protein 99 myb domain protein 99, ATMYBCU15,
myb domain protein 99		 0.58 0.33 -0.32
36 AT3G12140 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML1, EMSY-like 1 0.58 0.32 -0.33
37 AT3G05850 transposable element gene 0.58 0.31 -0.32
38 AT4G00780 TRAF-like family protein -0.58 0.34 -0.31
39 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 0.58 0.32 -0.28
40 AT1G50140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.32 -0.33
41 AT1G63670 Protein of unknown function (DUF3741) 0.57 0.3 -0.32
42 AT5G63320 nuclear protein X1 nuclear protein X1 0.57 0.32 -0.31
43 AT1G25510 Eukaryotic aspartyl protease family protein -0.57 0.32 -0.32
44 AT4G21100 damaged DNA binding protein 1B damaged DNA binding protein 1B -0.56 0.31 -0.3
45 AT1G02710 glycine-rich protein 0.56 0.32 -0.31
46 AT1G63470 AT hook motif DNA-binding family protein 0.56 0.34 -0.31
47 AT1G48730 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.32 -0.33
48 AT4G08090 transposable element gene 0.56 0.34 -0.33
49 AT4G39180 Sec14p-like phosphatidylinositol transfer family protein ARABIDOPSIS THALIANA SECRETION 14,
SECRETION 14		 -0.56 0.3 -0.33
50 AT3G42980 transposable element gene 0.56 0.31 -0.31
51 AT5G46760 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC3 -0.56 0.31 -0.33
52 AT1G74700 tRNAse Z1 NUZ, tRNAse Z1 0.56 0.3 -0.31
53 AT5G51300 splicing factor-related 0.56 0.31 -0.3
54 AT1G24110 Peroxidase superfamily protein 0.55 0.3 -0.31
55 AT2G18930 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.34 -0.27
56 AT2G33540 C-terminal domain phosphatase-like 3 ATCPL3, C-terminal domain
phosphatase-like 3		 0.55 0.31 -0.3
57 AT1G63430 Leucine-rich repeat protein kinase family protein 0.55 0.34 -0.31
58 AT3G17280 F-box and associated interaction domains-containing protein -0.54 0.28 -0.32
59 AT5G09340 Ubiquitin family protein -0.54 0.29 -0.32
60 AT1G43580 Sphingomyelin synthetase family protein -0.54 0.34 -0.32
61 AT2G34940 VACUOLAR SORTING RECEPTOR 5 binding protein of 80 kDa 3;2,
VACUOLAR SORTING RECEPTOR 3;2,
VACUOLAR SORTING RECEPTOR 5		 -0.53 0.34 -0.29
62 AT3G04370 plasmodesmata-located protein 4 plasmodesmata-located protein 4 -0.53 0.34 -0.3
63 AT2G29250 Concanavalin A-like lectin protein kinase family protein -0.53 0.31 -0.31
64 AT2G39090 tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex 7,
AtAPC7		 -0.53 0.32 -0.34
65 AT2G06010 OBP3-responsive gene 4 OBP3-responsive gene 4 -0.53 0.32 -0.33
66 AT4G31230 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.52 0.34 -0.31
67 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 -0.52 0.31 -0.31
68 AT4G01960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits
to 67 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.32 -0.34
69 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.32
70 AT1G26870 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 9, FEZ		 -0.52 0.32 -0.32
71 AT3G28400 transposable element gene -0.52 0.32 -0.31
72 AT2G03110 RNA binding;nucleic acid binding -0.51 0.32 -0.31
73 AT2G17620 Cyclin B2;1 Cyclin B2;1 -0.51 0.3 -0.32
74 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 -0.51 0.31 -0.31
75 AT4G00350 MATE efflux family protein -0.51 0.35 -0.31
76 AT3G57320 unknown protein; Has 30 Blast hits to 30 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.51 0.29 -0.33
77 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein -0.5 0.31 -0.32
78 AT3G20030 F-box and associated interaction domains-containing protein -0.5 0.29 -0.3
79 AT4G26340 F-box/RNI-like/FBD-like domains-containing protein -0.5 0.31 -0.3
80 AT5G03270 lysine decarboxylase family protein LONELY GUY 6 -0.5 0.3 -0.33
81 AT5G41490 F-box associated ubiquitination effector family protein -0.48 0.29 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
82 C0215 PR_MST_2527.1 - - - 0.75 0.43 -0.47
83 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.72 0.43 -0.46 C0030
84 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III -0.71 0.47 -0.44 C0195
85 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.7 0.44 -0.43 C0012
86 C0198 Phosphatidylethanolamine-34:0 - - - 0.69 0.44 -0.47
87 C0213 PR_MST_2410.2 - - - 0.68 0.47 -0.42
88 C0214 PR_MST_2412.1 - - - 0.67 0.45 -0.48
89 C0162 MST_1588.3 - - - -0.65 0.47 -0.43
90 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.64 0.47 -0.48 C0262
91 C0159 MST_1505.6 - - - -0.63 0.43 -0.47
92 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.62 0.49 -0.45 C0027
93 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		-0.62 0.43 -0.47 C0087
94 C0006 β-Homothreonine L-β-Homothreonine - - -0.62 0.46 -0.45
95 C0096 Gluconic acid - D-Gluconate - 0.6 0.43 -0.47 C0096
96 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.6 0.47 -0.44 C0088
97 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.6 0.45 -0.45 C0261