AT1G49760 : poly(A) binding protein 8
Query Information
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AGICode AT1G49760
Description poly(A) binding protein 8
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 1 0.33 -0.32
2 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 0.9 0.31 -0.3
3 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.87 0.32 -0.31
4 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 0.87 0.36 -0.33
5 AT5G57020 myristoyl-CoA:protein N-myristoyltransferase ARABIDOPSIS THALIANA
MYRISTOYL-COA:PROTEIN
N-MYRISTOYLTRANSFERASE,
myristoyl-CoA:protein
N-myristoyltransferase		 0.86 0.32 -0.32
6 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.86 0.32 -0.3
7 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.85 0.34 -0.32
8 AT4G09800 S18 ribosomal protein S18 ribosomal protein 0.85 0.3 -0.33
9 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.85 0.33 -0.3
10 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.85 0.31 -0.33
11 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.84 0.32 -0.32
12 AT1G08360 Ribosomal protein L1p/L10e family 0.84 0.31 -0.33
13 AT3G58700 Ribosomal L5P family protein 0.84 0.32 -0.3
14 AT1G12270 stress-inducible protein, putative Hop1 0.84 0.33 -0.29
15 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.83 0.31 -0.32
16 AT5G60360 aleurain-like protease aleurain-like protease,
aleurain-like protease, SENESCENCE
ASSOCIATED GENE2		 -0.83 0.32 -0.34
17 AT4G10450 Ribosomal protein L6 family 0.83 0.29 -0.34
18 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.83 0.32 -0.32
19 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.83 0.29 -0.33
20 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 0.82 0.31 -0.3
21 AT4G34670 Ribosomal protein S3Ae 0.82 0.31 -0.32
22 AT1G60080 3'-5'-exoribonuclease family protein 0.82 0.31 -0.31
23 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.82 0.32 -0.32
24 AT1G11840 glyoxalase I homolog glyoxalase I homolog, glyoxalase I
homolog		 -0.82 0.29 -0.33
25 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.81 0.31 -0.33
26 AT5G58420 Ribosomal protein S4 (RPS4A) family protein 0.81 0.32 -0.34
27 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.81 0.31 -0.33
28 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).		 -0.81 0.31 -0.33
29 AT1G73040 Mannose-binding lectin superfamily protein -0.81 0.33 -0.33
30 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.81 0.31 -0.32
31 AT1G28395 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast
hits to 89 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.32 -0.31
32 AT1G25260 Ribosomal protein L10 family protein 0.81 0.3 -0.29
33 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.81 0.3 -0.3
34 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 0.81 0.34 -0.31
35 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.81 0.34 -0.3
36 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 0.81 0.32 -0.32
37 AT5G14600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.8 0.32 -0.32
38 AT5G26360 TCP-1/cpn60 chaperonin family protein 0.8 0.3 -0.3
39 AT2G29260 NAD(P)-binding Rossmann-fold superfamily protein 0.8 0.32 -0.33
40 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.8 0.32 -0.31
41 AT3G12520 sulfate transporter 4;2 sulfate transporter 4;2 -0.79 0.32 -0.33
42 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.79 0.32 -0.33
43 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.79 0.33 -0.3
44 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2		 -0.79 0.31 -0.32
45 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.79 0.3 -0.32
46 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 -0.79 0.31 -0.3
47 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.79 0.33 -0.31
48 AT5G14520 pescadillo-related 0.79 0.3 -0.3
49 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.78 0.29 -0.32
50 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.78 0.32 -0.29
51 AT4G00740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 QUASIMODO 3 0.78 0.31 -0.29
52 AT5G03490 UDP-Glycosyltransferase superfamily protein -0.78 0.31 -0.33
53 AT4G32720 La protein 1 La protein 1, La protein 1 0.78 0.3 -0.31
54 AT4G26300 Arginyl-tRNA synthetase, class Ic embryo defective 1027 0.78 0.34 -0.29
55 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 0.78 0.3 -0.33
56 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.78 0.32 -0.33
57 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.78 0.31 -0.33
58 AT5G25810 Integrase-type DNA-binding superfamily protein TINY 0.78 0.31 -0.29
59 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.78 0.31 -0.3
60 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.78 0.33 -0.31
61 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F 0.77 0.3 -0.33
62 AT2G36160 Ribosomal protein S11 family protein 0.77 0.33 -0.31
63 AT1G07770 ribosomal protein S15A ribosomal protein S15A 0.77 0.32 -0.31
64 AT1G64530 Plant regulator RWP-RK family protein 0.77 0.33 -0.32
65 AT1G09760 U2 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein
A		 0.77 0.3 -0.32
66 AT3G14620 cytochrome P450, family 72, subfamily A, polypeptide 8 cytochrome P450, family 72,
subfamily A, polypeptide 8		 -0.77 0.32 -0.3
67 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 0.77 0.33 -0.32
68 AT5G02450 Ribosomal protein L36e family protein 0.77 0.32 -0.32
69 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 0.77 0.34 -0.32
70 AT3G21750 UDP-glucosyl transferase 71B1 UDP-glucosyl transferase 71B1 -0.77 0.33 -0.32
71 AT1G19450 Major facilitator superfamily protein 0.76 0.31 -0.3
72 AT5G46290 3-ketoacyl-acyl carrier protein synthase I KETOACYL-ACP SYNTHASE 1,
3-ketoacyl-acyl carrier protein
synthase I		 0.76 0.33 -0.29
73 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.76 0.33 -0.32
74 AT5G49560 Putative methyltransferase family protein 0.76 0.3 -0.33
75 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.76 0.32 -0.32
76 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.76 0.3 -0.33
77 AT1G50920 Nucleolar GTP-binding protein 0.76 0.32 -0.32
78 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.32 -0.32
79 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.76 0.33 -0.32
80 AT5G10020 Leucine-rich receptor-like protein kinase family protein 0.76 0.31 -0.3
81 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B -0.76 0.31 -0.33
82 AT1G74410 RING/U-box superfamily protein -0.75 0.32 -0.34
83 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 -0.75 0.36 -0.31
84 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 -0.75 0.32 -0.33
85 AT5G64420 DNA polymerase V family 0.75 0.32 -0.31
86 AT3G61890 homeobox 12 homeobox 12, ARABIDOPSIS THALIANA
HOMEOBOX 12, homeobox 12		 -0.75 0.34 -0.31
87 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A 0.75 0.29 -0.3
88 AT1G04520 plasmodesmata-located protein 2 plasmodesmata-located protein 2 0.75 0.3 -0.33
89 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.75 0.33 -0.31
90 AT5G27450 mevalonate kinase mevalonate kinase, MEVALONATE
KINASE		 0.75 0.32 -0.29
91 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 -0.75 0.31 -0.32
92 AT1G69950 transposable element gene 0.75 0.34 -0.31
93 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.75 0.3 -0.31
94 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 -0.75 0.33 -0.28
95 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 -0.75 0.32 -0.3
96 AT5G43850 RmlC-like cupins superfamily protein ARD4, ATARD4 -0.74 0.33 -0.31
97 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.74 0.33 -0.29
98 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.74 0.34 -0.32
99 AT1G59700 glutathione S-transferase TAU 16 glutathione S-transferase TAU 16,
glutathione S-transferase TAU 16		 -0.74 0.3 -0.31
100 AT5G66730 C2H2-like zinc finger protein ENHYDROUS, INDETERMINATE DOMAIN 1 -0.74 0.31 -0.31
101 AT2G40435 BEST Arabidopsis thaliana protein match is: transcription
regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.74 0.29 -0.33
102 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.74 0.32 -0.32
103 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 -0.74 0.33 -0.31
104 AT5G47070 Protein kinase superfamily protein -0.74 0.32 -0.31
105 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.74 0.32 -0.32
106 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.73 0.31 -0.3
107 AT4G01070 UDP-Glycosyltransferase superfamily protein GT72B1, UDP-GLUCOSE-DEPENDENT
GLUCOSYLTRANSFERASE 72 B1		 -0.73 0.32 -0.3
108 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.73 0.34 -0.33
109 AT3G27110 Peptidase family M48 family protein -0.73 0.31 -0.33
110 AT5G37670 HSP20-like chaperones superfamily protein -0.73 0.31 -0.32
111 AT5G24380 YELLOW STRIPE like 2 YELLOW STRIPE LIKE 2, YELLOW
STRIPE like 2		 -0.72 0.31 -0.31
112 AT5G04760 Duplicated homeodomain-like superfamily protein -0.72 0.3 -0.3
113 AT1G17745 D-3-phosphoglycerate dehydrogenase 3-phosphoglycerate dehydrogenase -0.72 0.32 -0.32
114 AT2G42950 Magnesium transporter CorA-like family protein -0.72 0.3 -0.31
115 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 -0.72 0.34 -0.33
116 AT5G45350 proline-rich family protein -0.71 0.33 -0.31
117 AT2G43530 Scorpion toxin-like knottin superfamily protein -0.71 0.3 -0.33
118 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.71 0.3 -0.34
119 AT1G31550 GDSL-like Lipase/Acylhydrolase superfamily protein -0.71 0.32 -0.32
120 AT3G46110 Domain of unknown function (DUF966) -0.71 0.32 -0.31
121 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 -0.71 0.33 -0.31
122 AT3G60140 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 30, DARK
INDUCIBLE 2, SENESCENCE-RELATED
GENE 2		 -0.71 0.31 -0.29
123 AT3G16230 Predicted eukaryotic LigT -0.71 0.33 -0.31
124 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 -0.71 0.32 -0.32
125 AT1G52880 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 18, ATNAM, NO APICAL
MERISTEM, NAC-REGULATED SEED
MORPHOLOGY 2		 -0.71 0.31 -0.32
126 AT4G14020 Rapid alkalinization factor (RALF) family protein -0.71 0.3 -0.32
127 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.71 0.34 -0.29
128 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.71 0.32 -0.32
129 AT4G17470 alpha/beta-Hydrolases superfamily protein -0.7 0.31 -0.3
130 AT5G40670 PQ-loop repeat family protein / transmembrane family
protein		 -0.7 0.33 -0.31
131 AT4G38260 Protein of unknown function (DUF833) -0.7 0.32 -0.31
132 AT1G52410 TSK-associating protein 1 TSK-associating protein 1 -0.7 0.3 -0.3
133 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.7 0.33 -0.32
134 AT2G45990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 312
Blast hits to 312 proteins in 90 species: Archae - 0;
Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 -0.7 0.32 -0.31
135 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.69 0.34 -0.31
136 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase -0.69 0.33 -0.31
137 AT2G37240 Thioredoxin superfamily protein -0.69 0.32 -0.34
138 AT1G21550 Calcium-binding EF-hand family protein -0.69 0.31 -0.32
139 AT1G12200 Flavin-binding monooxygenase family protein flavin monooxygenase -0.69 0.33 -0.31
140 AT5G16990 Zinc-binding dehydrogenase family protein -0.69 0.32 -0.32
141 AT1G52400 beta glucosidase 18 A. THALIANA BETA-GLUCOSIDASE 1,
BETA-GLUCOSIDASE HOMOLOG 1, beta
glucosidase 18		 -0.69 0.3 -0.34
142 AT4G39540 shikimate kinase 2 ATSK2, shikimate kinase 2 -0.69 0.31 -0.33
143 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.69 0.31 -0.31
144 AT1G18720 Protein of unknown function (DUF962) -0.69 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
145 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine 0.83 0.44 -0.42 C0050
146 C0125 isorhamnetin-3-O-glucoside - - - 0.75 0.44 -0.46