AT1G01960 : embryo sac development arrest 10
Query Information
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AGICode AT1G01960
Description SEC7-like guanine nucleotide exchange family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 1 0.29 -0.32
2 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.78 0.31 -0.31
3 AT2G07360 SH3 domain-containing protein 0.77 0.32 -0.31
4 AT2G20190 CLIP-associated protein CLIP-ASSOCIATED PROTEIN,
CLIP-associated protein		 0.75 0.32 -0.32
5 AT2G16485 nucleic acid binding;zinc ion binding;DNA binding 0.74 0.34 -0.34
6 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.74 0.33 -0.31
7 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.73 0.31 -0.3
8 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 0.73 0.32 -0.31
9 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.72 0.31 -0.32
10 AT2G02640 Cysteine/Histidine-rich C1 domain family protein -0.72 0.31 -0.31
11 AT5G24710 Transducin/WD40 repeat-like superfamily protein 0.72 0.32 -0.3
12 AT2G45540 WD-40 repeat family protein / beige-related 0.71 0.33 -0.3
13 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.7 0.31 -0.32
14 AT3G58290 TRAF-like superfamily protein -0.7 0.32 -0.32
15 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 0.7 0.32 -0.31
16 AT4G35800 RNA polymerase II large subunit RNA polymerase II large subunit,
RNA POLYMERASE II LARGE SUBUNIT,
RNA_POL_II_LSRNA_POL_II_LS, RNA
POLYMERASE II LARGE SUBUNIT		 0.7 0.32 -0.32
17 AT3G57890 Tubulin binding cofactor C domain-containing protein 0.7 0.3 -0.33
18 AT3G52640 Zn-dependent exopeptidases superfamily protein 0.69 0.32 -0.33
19 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.69 0.3 -0.31
20 AT5G11040 TRS120 AtTRS120, TRS120 0.69 0.31 -0.32
21 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.69 0.3 -0.33
22 AT5G28090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.31 -0.34
23 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.68 0.32 -0.29
24 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.68 0.32 -0.31
25 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.68 0.32 -0.33
26 AT4G29090 Ribonuclease H-like superfamily protein 0.68 0.31 -0.31
27 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 -0.68 0.32 -0.32
28 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 0.68 0.33 -0.33
29 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.68 0.33 -0.31
30 AT2G04830 Protein of unknown function (DUF295) 0.67 0.28 -0.3
31 AT4G29620 Cytidine/deoxycytidylate deaminase family protein 0.66 0.31 -0.31
32 AT1G02890 AAA-type ATPase family protein 0.66 0.34 -0.32
33 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 0.66 0.31 -0.32
34 AT5G58410 HEAT/U-box domain-containing protein 0.66 0.3 -0.32
35 AT2G19390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G29790.1); Has 203 Blast hits
to 188 proteins in 60 species: Archae - 0; Bacteria - 11;
Metazoa - 24; Fungi - 34; Plants - 93; Viruses - 0; Other
Eukaryotes - 41 (source: NCBI BLink).		 0.66 0.29 -0.31
36 AT4G38200 SEC7-like guanine nucleotide exchange family protein 0.65 0.31 -0.33
37 AT5G61140 U5 small nuclear ribonucleoprotein helicase 0.65 0.3 -0.31
38 AT3G14860 NHL domain-containing protein 0.65 0.33 -0.32
39 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.65 0.3 -0.29
40 AT4G00150 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 3, HAIRY MERISTEM 3, LOST
MERISTEMS 3		 0.64 0.31 -0.32
41 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.64 0.31 -0.32
42 AT1G59850 ARM repeat superfamily protein 0.64 0.32 -0.3
43 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.64 0.32 -0.32
44 AT4G03550 glucan synthase-like 5 glucan synthase-like 5, ATGSL5,
GSL05, glucan synthase-like 5,
GLUCAN SYNTHASE-LIKE 5, POWDERY
MILDEW RESISTANT 4		 0.64 0.31 -0.29
45 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 0.64 0.3 -0.32
46 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 0.64 0.32 -0.33
47 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.64 0.31 -0.3
48 AT1G21630 Calcium-binding EF hand family protein 0.63 0.32 -0.32
49 AT4G39320 microtubule-associated protein-related -0.63 0.34 -0.33
50 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.63 0.32 -0.3
51 AT4G10280 RmlC-like cupins superfamily protein -0.63 0.33 -0.31
52 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80		 0.63 0.31 -0.32
53 AT5G39500 GNOM-like 1 ENDOPLASMIC RETICULUM MORPHOLOGY
1, GNOM-like 1		 0.63 0.3 -0.31
54 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.63 0.32 -0.34
55 AT2G42090 actin 9 actin 9 0.63 0.3 -0.31
56 AT1G30473 Heavy metal transport/detoxification superfamily protein -0.63 0.34 -0.31
57 AT4G25720 glutaminyl cyclase ARABIDOPSIS THALIANA GLUTAMINYL
CYCLASE, glutaminyl cyclase,
GLUTAMINYL CYCLOTRANSFERASE		 -0.63 0.33 -0.33
58 AT3G07100 Sec23/Sec24 protein transport family protein AtSEC24A, ENDOPLASMIC RETICULUM
MORPHOLOGY 2, SEC24A		 0.62 0.32 -0.33
59 AT3G32940 RNA-binding KH domain-containing protein 0.62 0.31 -0.31
60 AT5G27970 ARM repeat superfamily protein 0.62 0.29 -0.3
61 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.62 0.3 -0.29
62 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.62 0.3 -0.32
63 AT1G35740 pseudogene, similar to putative beta-1,3-glucan synthase,
blastp match of 57% identity and 2.1e-14 P-value to
GP|23503034|gb|AAK49452.2|AF304372_1|AF304372 putative
beta-1,3-glucan synthase {Nicotiana alata}		 -0.62 0.31 -0.31
64 AT2G29080 FTSH protease 3 FTSH protease 3 0.61 0.31 -0.34
65 AT3G21640 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 ATFKBP42, FK506-BINDING PROTEIN
42, TWISTED DWARF 1, ULTRACURVATA
2		 -0.61 0.31 -0.31
66 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.61 0.31 -0.3
67 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 -0.61 0.32 -0.33
68 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.61 0.31 -0.31
69 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family -0.61 0.31 -0.31
70 AT3G17430 Nucleotide-sugar transporter family protein 0.61 0.32 -0.3
71 AT1G71820 SEC6 SEC6 0.6 0.32 -0.31
72 AT2G47980 sister-chromatid cohesion protein 3 SISTER-CHROMATID COHESION PROTEIN
3, sister-chromatid cohesion
protein 3		 0.6 0.31 -0.32
73 AT2G41960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast
hits to 7260 proteins in 458 species: Archae - 17; Bacteria
- 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses
- 38; Other Eukaryotes - 4487 (source: NCBI BLink).		 0.6 0.33 -0.3
74 AT3G08980 Peptidase S24/S26A/S26B/S26C family protein 0.6 0.31 -0.31
75 AT1G59650 Protein of unknown function (DUF1336) CW14 0.6 0.3 -0.3
76 AT2G32910 DCD (Development and Cell Death) domain protein 0.6 0.33 -0.34
77 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 -0.6 0.32 -0.32
78 AT2G30680 BEST Arabidopsis thaliana protein match is: glucan
synthase-like 3 (TAIR:AT2G31960.2); Has 80 Blast hits to 80
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.31 -0.31
79 AT2G04580 transposable element gene -0.59 0.32 -0.29
80 AT2G46400 WRKY DNA-binding protein 46 WRKY DNA-BINDING PROTEIN 46, WRKY
DNA-binding protein 46		 -0.59 0.33 -0.34
81 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein 0.59 0.32 -0.32
82 AT2G05820 transposable element gene -0.59 0.3 -0.34
83 AT2G40740 WRKY DNA-binding protein 55 WRKY DNA-BINDING PROTEIN 55, WRKY
DNA-binding protein 55		 0.59 0.32 -0.32
84 AT4G11270 Transducin/WD40 repeat-like superfamily protein 0.59 0.28 -0.32
85 AT5G07280 Leucine-rich repeat transmembrane protein kinase EXCESS MICROSPOROCYTES1, EXTRA
SPOROGENOUS CELLS		 0.59 0.32 -0.3
86 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.29 -0.31
87 AT2G35630 ARM repeat superfamily protein GEM1, MICROTUBULE ORGANIZATION 1 0.59 0.3 -0.31
88 AT3G28720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in
85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi
- 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732
(source: NCBI BLink).		 0.59 0.31 -0.31
89 AT2G07520 transposable element gene 0.59 0.3 -0.31
90 AT5G17020 exportin 1A ATCRM1, ARABIDOPSIS THALIANA
EXPORTIN 1, HEAT-INTOLERANT 2,
EXPORTIN 1, exportin 1A		 0.58 0.33 -0.32
91 AT3G22050 Domain of unknown function (DUF26) 0.58 0.31 -0.34
92 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 0.58 0.31 -0.31
93 AT5G18410 transcription activators ATSRA1, KLUNKER, PIROGI, PIROGI
121, PIRP, SRA1		 0.58 0.31 -0.31
94 AT4G20420 Tapetum specific protein TAP35/TAP44 -0.58 0.31 -0.31
95 AT4G37230 Photosystem II manganese-stabilising protein (PsbO) family 0.58 0.32 -0.31
96 AT5G47490 RGPR-related 0.58 0.32 -0.34
97 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 -0.58 0.29 -0.33
98 AT5G52750 Heavy metal transport/detoxification superfamily protein -0.56 0.35 -0.32
99 AT5G27830 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to oxidative stress; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Folate receptor, conserved region (InterPro:IPR018143); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.31 -0.33
100 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.56 0.33 -0.29
101 AT1G73440 calmodulin-related -0.56 0.31 -0.31
102 AT5G06190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.3 -0.33
103 AT5G55590 Pectin lyase-like superfamily protein QUARTET 1 -0.56 0.31 -0.33
104 AT2G20625 Protein of unknown function (DUF626) -0.56 0.34 -0.3
105 AT5G55780 Cysteine/Histidine-rich C1 domain family protein -0.55 0.31 -0.3
106 AT4G09760 Protein kinase superfamily protein -0.55 0.32 -0.32
107 AT3G21780 UDP-glucosyl transferase 71B6 UDP-glucosyl transferase 71B6 -0.55 0.34 -0.32
108 AT5G26920 Cam-binding protein 60-like G Cam-binding protein 60-like G -0.55 0.32 -0.32
109 AT3G62180 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.55 0.34 -0.32
110 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 -0.55 0.33 -0.31
111 AT2G02250 phloem protein 2-B2 phloem protein 2-B2, phloem
protein 2-B2		 -0.54 0.34 -0.31
112 AT3G08500 myb domain protein 83 myb domain protein 83, myb domain
protein 83		 -0.54 0.3 -0.32
113 AT2G13950 Cysteine/Histidine-rich C1 domain family protein -0.54 0.3 -0.34
114 AT2G24600 Ankyrin repeat family protein -0.53 0.31 -0.31
115 AT1G24210 Paired amphipathic helix (PAH2) superfamily protein -0.53 0.29 -0.32
116 AT2G28355 low-molecular-weight cysteine-rich 5 low-molecular-weight cysteine-rich
5		 -0.53 0.31 -0.32
117 AT5G61600 ethylene response factor 104 ethylene response factor 104 -0.53 0.31 -0.32
118 AT4G10410 Leucine-rich repeat (LRR) family protein -0.52 0.32 -0.32
119 AT2G25230 myb domain protein 100 myb domain protein 100, myb domain
protein 100		 -0.52 0.31 -0.3
120 AT1G33760 Integrase-type DNA-binding superfamily protein -0.52 0.32 -0.31
121 AT3G42250 transposable element gene -0.52 0.32 -0.32
122 AT1G35647 transposable element gene -0.52 0.33 -0.3
123 AT5G36930 Disease resistance protein (TIR-NBS-LRR class) family -0.52 0.33 -0.32
124 AT2G31770 RING/U-box superfamily protein ARIADNE 9, ARABIDOPSIS ARIADNE 9 -0.52 0.31 -0.32
125 AT5G48550 F-box associated ubiquitination effector family protein -0.52 0.3 -0.31
126 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.51 0.32 -0.3
127 AT3G20030 F-box and associated interaction domains-containing protein -0.51 0.32 -0.32
128 AT3G62740 beta glucosidase 7 beta glucosidase 7 -0.51 0.3 -0.33
129 AT4G05250 Ubiquitin-like superfamily protein -0.51 0.3 -0.29
130 AT1G15530 Concanavalin A-like lectin protein kinase family protein -0.51 0.32 -0.34
131 AT1G22190 Integrase-type DNA-binding superfamily protein related to AP2 4 -0.51 0.31 -0.32
132 AT2G20380 Galactose oxidase/kelch repeat superfamily protein -0.5 0.34 -0.32
133 AT1G74480 RWP-RK domain-containing protein AtRKD2, RWP-RK domain containing 2 -0.5 0.32 -0.33
134 AT5G41400 RING/U-box superfamily protein -0.5 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
135 C0074 Cystine L-Cystine L-Cystine protein precursor 0.72 0.43 -0.47 C0074