AGICode | AT1G02000 |
Description | UDP-D-glucuronate 4-epimerase 2 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G02000 | UDP-D-glucuronate 4-epimerase 2 | UDP-D-glucuronate 4-epimerase 2 | 1 | 0.32 | -0.31 | ||
2 | AT3G11330 | plant intracellular ras group-related LRR 9 | plant intracellular ras group-related LRR 9 |
0.83 | 0.31 | -0.33 | ||
3 | AT5G55850 | RPM1-interacting protein 4 (RIN4) family protein | NOI | 0.83 | 0.3 | -0.33 | ||
4 | AT5G59840 | Ras-related small GTP-binding family protein | 0.83 | 0.3 | -0.34 | |||
5 | AT4G26690 | PLC-like phosphodiesterase family protein | Glycerophosphodiester phosphodiesterase (GDPD) like 3, GLYCEROPHOSPHODIESTERASE-LIKE 2, MUTANT ROOT HAIR 5, SHAVEN 3 |
0.83 | 0.32 | -0.31 | ||
6 | AT5G47200 | RAB GTPase homolog 1A | RAB GTPase homolog 1A, ARABIDOPSIS RAB GTPASE HOMOLOG D2B, RAB GTPase homolog 1A |
0.83 | 0.29 | -0.32 | ||
7 | AT3G10370 | FAD-dependent oxidoreductase family protein | SUGAR-DEPENDENT 6 | 0.82 | 0.31 | -0.31 | ||
8 | AT3G11780 | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein |
0.82 | 0.33 | -0.3 | |||
9 | AT4G10140 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.82 | 0.3 | -0.33 | |||
10 | AT5G64230 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.81 | 0.3 | -0.32 | |||
11 | AT3G06490 | myb domain protein 108 | myb domain protein 108, BOTRYTIS-SUSCEPTIBLE1, myb domain protein 108 |
0.81 | 0.35 | -0.31 | ||
12 | AT2G02870 | Galactose oxidase/kelch repeat superfamily protein | 0.81 | 0.3 | -0.32 | |||
13 | AT2G34630 | geranyl diphosphate synthase 1 | GERANYLPYROPHOSPHATE SYNTHASE, geranyl diphosphate synthase 1 |
0.81 | 0.31 | -0.3 | ||
14 | AT5G56170 | LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 | LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 |
0.8 | 0.3 | -0.31 | ||
15 | AT1G75460 | ATP-dependent protease La (LON) domain protein | -0.8 | 0.31 | -0.31 | |||
16 | AT1G62045 | BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.8 | 0.34 | -0.31 | |||
17 | AT3G09810 | isocitrate dehydrogenase VI | isocitrate dehydrogenase VI | 0.8 | 0.31 | -0.3 | ||
18 | AT5G04170 | Calcium-binding EF-hand family protein | 0.8 | 0.31 | -0.34 | |||
19 | AT5G40580 | 20S proteasome beta subunit PBB2 | 20S proteasome beta subunit PBB2 | 0.8 | 0.32 | -0.32 | ||
20 | AT3G22290 | Endoplasmic reticulum vesicle transporter protein | 0.8 | 0.29 | -0.29 | |||
21 | AT1G68410 | Protein phosphatase 2C family protein | 0.8 | 0.33 | -0.32 | |||
22 | AT1G54090 | exocyst subunit exo70 family protein D2 | exocyst subunit exo70 family protein D2, exocyst subunit exo70 family protein D2 |
0.8 | 0.29 | -0.32 | ||
23 | AT1G17620 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
0.8 | 0.32 | -0.31 | |||
24 | AT4G15470 | Bax inhibitor-1 family protein | 0.79 | 0.31 | -0.27 | |||
25 | AT4G22730 | Leucine-rich repeat protein kinase family protein | -0.79 | 0.32 | -0.31 | |||
26 | AT2G40090 | ABC2 homolog 9 | ABC2 homolog 9, ABC2 homolog 9 | 0.79 | 0.33 | -0.32 | ||
27 | AT2G42680 | multiprotein bridging factor 1A | ARABIDOPSIS THALIANA MULTIPROTEIN BRIDGING FACTOR 1A, multiprotein bridging factor 1A |
0.79 | 0.32 | -0.32 | ||
28 | AT3G24550 | proline extensin-like receptor kinase 1 | proline-rich extensin-like receptor kinase 1, proline-rich extensin-like receptor kinase 1 |
0.79 | 0.32 | -0.32 | ||
29 | AT3G03720 | cationic amino acid transporter 4 | cationic amino acid transporter 4 | 0.79 | 0.34 | -0.31 | ||
30 | AT2G20760 | Clathrin light chain protein | 0.79 | 0.31 | -0.31 | |||
31 | AT4G23710 | vacuolar ATP synthase subunit G2 | vacuolar ATP synthase subunit G2, VACUOLAR ATP SYNTHASE SUBUNIT G2, VHA-G2 |
0.79 | 0.32 | -0.3 | ||
32 | AT2G02860 | sucrose transporter 2 | ARABIDOPSIS THALIANA SUCROSE TRANSPORTER 3, ATSUT2, SUCROSE TRANSPORTER 3, sucrose transporter 2 |
0.78 | 0.31 | -0.31 | ||
33 | AT1G14700 | purple acid phosphatase 3 | ATPAP3, purple acid phosphatase 3 | -0.78 | 0.32 | -0.32 | ||
34 | AT1G25370 | Protein of unknown function (DUF1639) | 0.78 | 0.31 | -0.32 | |||
35 | AT3G29375 | XH domain-containing protein | -0.78 | 0.32 | -0.32 | |||
36 | AT2G35736 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25225.1); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.78 | 0.3 | -0.3 | |||
37 | AT5G20910 | RING/U-box superfamily protein | ABI3-interacting protein 2 | 0.78 | 0.31 | -0.33 | ||
38 | AT4G35860 | GTP-binding 2 | GTP-binding 2, ATRAB2C, ATRABB1B, GTP-binding 2 |
0.78 | 0.3 | -0.31 | ||
39 | AT5G01800 | saposin B domain-containing protein | 0.77 | 0.33 | -0.32 | |||
40 | AT4G28300 | Protein of unknown function (DUF1421) | 0.77 | 0.31 | -0.33 | |||
41 | AT5G50850 | Transketolase family protein | MACCI-BOU | 0.77 | 0.32 | -0.32 | ||
42 | AT5G35680 | Nucleic acid-binding, OB-fold-like protein | 0.77 | 0.31 | -0.3 | |||
43 | AT5G58290 | regulatory particle triple-A ATPase 3 | regulatory particle triple-A ATPase 3 |
0.77 | 0.31 | -0.31 | ||
44 | AT1G11300 | protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding |
-0.77 | 0.31 | -0.31 | |||
45 | AT1G15860 | Domain of unknown function (DUF298) | 0.77 | 0.33 | -0.31 | |||
46 | AT4G00850 | GRF1-interacting factor 3 | GRF1-interacting factor 3 | -0.77 | 0.32 | -0.33 | ||
47 | AT2G45140 | plant VAP homolog 12 | plant VAP homolog 12 | 0.77 | 0.32 | -0.3 | ||
48 | AT2G20900 | diacylglycerol kinase 5 | ATDGK5, diacylglycerol kinase 5 | 0.77 | 0.31 | -0.3 | ||
49 | AT2G37550 | ARF-GAP domain 7 | ARF-GAP domain 7, yeast pde1 suppressor 1 |
0.76 | 0.31 | -0.31 | ||
50 | AT4G29750 | CRS1 / YhbY (CRM) domain-containing protein | -0.76 | 0.3 | -0.29 | |||
51 | AT5G56750 | N-MYC downregulated-like 1 | N-MYC downregulated-like 1 | 0.76 | 0.31 | -0.31 | ||
52 | AT3G26280 | cytochrome P450, family 71, subfamily B, polypeptide 4 | cytochrome P450, family 71, subfamily B, polypeptide 4 |
-0.76 | 0.31 | -0.33 | ||
53 | AT4G36920 | Integrase-type DNA-binding superfamily protein | APETALA 2, FLOWER 1, FLORAL MUTANT 2 |
0.76 | 0.32 | -0.33 | ||
54 | AT2G42690 | alpha/beta-Hydrolases superfamily protein | -0.76 | 0.31 | -0.32 | |||
55 | AT5G38980 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.76 | 0.33 | -0.33 | |||
56 | AT1G73030 | SNF7 family protein | CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1A, VPS46.2 |
0.76 | 0.32 | -0.32 | ||
57 | AT2G38610 | RNA-binding KH domain-containing protein | 0.76 | 0.3 | -0.31 | |||
58 | AT1G11070 | BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in 152 species: Archae - 0; Bacteria - 68; Metazoa - 159; Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). |
-0.76 | 0.3 | -0.31 | |||
59 | AT1G64740 | alpha-1 tubulin | alpha-1 tubulin | 0.76 | 0.31 | -0.31 | ||
60 | AT2G38360 | prenylated RAB acceptor 1.B4 | prenylated RAB acceptor 1.B4 | 0.75 | 0.3 | -0.32 | ||
61 | AT1G78420 | RING/U-box superfamily protein | 0.75 | 0.31 | -0.34 | |||
62 | AT1G49180 | protein kinase family protein | -0.75 | 0.3 | -0.32 | |||
63 | AT1G28600 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.75 | 0.32 | -0.32 | |||
64 | AT3G19970 | alpha/beta-Hydrolases superfamily protein | 0.75 | 0.33 | -0.34 | |||
65 | AT1G28280 | VQ motif-containing protein | 0.75 | 0.31 | -0.33 | |||
66 | AT5G59420 | OSBP(oxysterol binding protein)-related protein 3C | OSBP(oxysterol binding protein)-related protein 3C |
0.75 | 0.32 | -0.32 | ||
67 | AT1G77890 | DNA-directed RNA polymerase II protein | 0.75 | 0.3 | -0.3 | |||
68 | AT5G17640 | Protein of unknown function (DUF1005) | 0.74 | 0.31 | -0.28 | |||
69 | AT4G03120 | C2H2 and C2HC zinc fingers superfamily protein | 0.74 | 0.32 | -0.29 | |||
70 | AT2G22860 | phytosulfokine 2 precursor | phytosulfokine 2 precursor, phytosulfokine 2 precursor |
0.74 | 0.29 | -0.29 | ||
71 | AT3G02070 | Cysteine proteinases superfamily protein | 0.74 | 0.31 | -0.31 | |||
72 | AT5G32440 | Ubiquitin system component Cue protein | 0.74 | 0.31 | -0.32 | |||
73 | AT5G48730 | Pentatricopeptide repeat (PPR) superfamily protein | -0.74 | 0.32 | -0.29 | |||
74 | AT5G45900 | ThiF family protein | AUTOPHAGY 7, ATAPG7, ATATG7, AUTOPHAGY-RELATED 7 |
0.74 | 0.32 | -0.32 | ||
75 | AT3G09840 | cell division cycle 48 | ATCDC48, cell division cycle 48, CDC48A |
0.74 | 0.32 | -0.3 | ||
76 | AT1G35910 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
trehalose-6-phosphate phosphatase D |
0.74 | 0.32 | -0.31 | ||
77 | AT2G03750 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.74 | 0.33 | -0.35 | |||
78 | AT2G23200 | Protein kinase superfamily protein | -0.74 | 0.31 | -0.31 | |||
79 | AT4G35440 | chloride channel E | ATCLC-E, chloride channel E, CHLORIDE CHANNEL E |
-0.74 | 0.3 | -0.33 | ||
80 | AT1G07440 | NAD(P)-binding Rossmann-fold superfamily protein | -0.74 | 0.31 | -0.33 | |||
81 | AT4G13340 | Leucine-rich repeat (LRR) family protein | leucine-rich repeat/extensin 3 | 0.74 | 0.3 | -0.35 | ||
82 | AT3G57390 | AGAMOUS-like 18 | AGAMOUS-like 18 | 0.73 | 0.3 | -0.32 | ||
83 | AT5G55470 | Na+/H+ (sodium hydrogen) exchanger 3 | ARABIDOPSIS THALIANA NA+/H+ (SODIUM HYDROGEN) EXCHANGER 3, Na+/H+ (sodium hydrogen) exchanger 3 |
-0.73 | 0.32 | -0.31 | ||
84 | AT3G59950 | Peptidase family C54 protein | 0.73 | 0.32 | -0.34 | |||
85 | AT2G01190 | Octicosapeptide/Phox/Bem1p family protein | PIGMENT DEFECTIVE 331 | 0.73 | 0.33 | -0.31 | ||
86 | AT2G15050 | lipid transfer protein | lipid transfer protein, lipid transfer protein 7 |
-0.73 | 0.33 | -0.31 | ||
87 | AT1G74330 | Protein kinase superfamily protein | 0.73 | 0.32 | -0.31 | |||
88 | AT2G37940 | Arabidopsis Inositol phosphorylceramide synthase 2 | Arabidopsis Inositol phosphorylceramide synthase 2, enhancing RPW8-mediated HR-like cell death 1 |
0.73 | 0.31 | -0.3 | ||
89 | AT1G08030 | tyrosylprotein sulfotransferase | active quiescent center1, tyrosylprotein sulfotransferase |
0.73 | 0.32 | -0.31 | ||
90 | AT1G79410 | organic cation/carnitine transporter5 | organic cation/carnitine transporter5, organic cation/carnitine transporter5 |
0.73 | 0.3 | -0.33 | ||
91 | AT3G16560 | Protein phosphatase 2C family protein | -0.73 | 0.3 | -0.3 | |||
92 | AT1G66230 | myb domain protein 20 | myb domain protein 20, myb domain protein 20 |
-0.72 | 0.31 | -0.3 | ||
93 | AT1G49500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.31 | -0.32 | |||
94 | AT1G60970 | SNARE-like superfamily protein | -0.72 | 0.33 | -0.31 | |||
95 | AT4G11900 | S-locus lectin protein kinase family protein | -0.72 | 0.31 | -0.31 | |||
96 | AT4G18910 | NOD26-like intrinsic protein 1;2 | NOD26-LIKE INTRINSIC PROTEIN 2, NOD26-like intrinsic protein 1;2, NOD26-LIKE INTRINSIC PROTEIN 2 |
-0.71 | 0.3 | -0.31 | ||
97 | AT4G15110 | cytochrome P450, family 97, subfamily B, polypeptide 3 | cytochrome P450, family 97, subfamily B, polypeptide 3 |
-0.71 | 0.32 | -0.31 | ||
98 | AT2G34920 | RING/U-box superfamily protein | embryo sac development arrest 18 | -0.71 | 0.31 | -0.32 | ||
99 | AT3G51420 | strictosidine synthase-like 4 | STRICTOSIDINE SYNTHASE-LIKE 4, strictosidine synthase-like 4 |
-0.71 | 0.31 | -0.34 | ||
100 | AT5G52180 | LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 161AB, predicted (InterPro:IPR019395); Has 82 Blast hits to 82 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.7 | 0.32 | -0.31 | |||
101 | AT2G37300 | unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). |
ATP-binding cassette I16 | -0.7 | 0.33 | -0.32 | ||
102 | AT2G28310 | Protein of unknown function (DUF707) | -0.69 | 0.3 | -0.3 | |||
103 | AT3G15380 | Plasma-membrane choline transporter family protein | -0.69 | 0.34 | -0.33 | |||
104 | AT3G19720 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ACCUMULATION AND REPLICATION OF CHLOROPLAST 5, Dynamin related protein 5B |
-0.69 | 0.34 | -0.32 | ||
105 | AT1G35420 | alpha/beta-Hydrolases superfamily protein | -0.69 | 0.31 | -0.31 | |||
106 | AT2G29320 | NAD(P)-binding Rossmann-fold superfamily protein | -0.69 | 0.32 | -0.31 | |||
107 | AT1G62690 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.3 | -0.34 | |||
108 | AT5G05940 | ROP guanine nucleotide exchange factor 5 | ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5, ROP guanine nucleotide exchange factor 5 |
-0.69 | 0.31 | -0.31 | ||
109 | AT5G53410 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.69 | 0.31 | -0.29 | |||
110 | AT1G23310 | glutamate:glyoxylate aminotransferase | ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1, GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 1, glutamate:glyoxylate aminotransferase |
-0.68 | 0.31 | -0.32 | ||
111 | AT5G03070 | importin alpha isoform 9 | importin alpha isoform 9 | -0.68 | 0.32 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
112 | C0067 | Citramalic acid | (S)-(+)-, (R)-(-)-Citramalate | (S)-Citramalate; (R)-Citramalate | - | 0.89 | 0.46 | -0.43 | ||
113 | C0263 | UMP | - | UMP | pyrimidine salvage pathway, dolichyl-diphosphooligosaccharide biosynthesis, lipid IVA biosynthesis, uridine-5'-phosphate biosynthesis, pyrimidine ribonucleotides interconversion |
-0.84 | 0.44 | -0.44 |