AT1G01940 : -
Query Information
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AGICode AT1G01940
Description Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 1 0.32 -0.34
2 AT2G44120 Ribosomal protein L30/L7 family protein 0.88 0.3 -0.31
3 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.88 0.35 -0.31
4 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.88 0.32 -0.32
5 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.86 0.31 -0.33
6 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.85 0.32 -0.34
7 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 0.85 0.33 -0.3
8 AT2G40420 Transmembrane amino acid transporter family protein -0.84 0.32 -0.31
9 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.84 0.32 -0.3
10 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.84 0.31 -0.3
11 AT2G31710 Vacuolar ATPase assembly integral membrane protein
VMA21-like domain		 0.84 0.29 -0.31
12 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.33 -0.32
13 AT2G39390 Ribosomal L29 family protein 0.84 0.31 -0.36
14 AT1G54770 Fcf2 pre-rRNA processing protein 0.83 0.32 -0.32
15 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.83 0.33 -0.34
16 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.83 0.27 -0.32
17 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.83 0.31 -0.31
18 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.32 -0.3
19 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 0.83 0.31 -0.32
20 AT2G44510 CDK inhibitor P21 binding protein 0.83 0.32 -0.33
21 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 0.83 0.3 -0.34
22 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.82 0.34 -0.33
23 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 0.82 0.33 -0.31
24 AT3G07590 Small nuclear ribonucleoprotein family protein 0.82 0.32 -0.3
25 AT2G44860 Ribosomal protein L24e family protein 0.82 0.31 -0.33
26 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.82 0.34 -0.33
27 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 0.82 0.3 -0.32
28 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.81 0.32 -0.31
29 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 0.81 0.3 -0.33
30 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.81 0.32 -0.31
31 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.81 0.32 -0.31
32 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 0.81 0.34 -0.32
33 AT3G21140 Pyridoxamine 5'-phosphate oxidase family protein 0.81 0.33 -0.32
34 AT1G04340 HR-like lesion-inducing protein-related 0.8 0.33 -0.32
35 AT3G57000 nucleolar essential protein-related 0.8 0.32 -0.32
36 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.29 -0.31
37 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.8 0.35 -0.33
38 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.8 0.3 -0.34
39 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.8 0.33 -0.3
40 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 0.8 0.3 -0.34
41 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.8 0.32 -0.32
42 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.79 0.31 -0.3
43 AT5G06360 Ribosomal protein S8e family protein 0.79 0.32 -0.32
44 AT1G75670 DNA-directed RNA polymerases 0.79 0.3 -0.32
45 AT2G47640 Small nuclear ribonucleoprotein family protein 0.79 0.32 -0.31
46 AT2G16500 arginine decarboxylase 1 arginine decarboxylase 1, ARGDC,
ARGDC1, SPE1		 0.79 0.33 -0.31
47 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 -0.79 0.34 -0.33
48 AT2G21790 ribonucleotide reductase 1 RIBONUCLEOTIDE REDUCTASE LARGE
SUBUNIT 1, CRINKLY LEAVES 8,
RIBONUCLEOTIDE REDUCTASE 1,
ribonucleotide reductase 1		 0.79 0.32 -0.31
49 AT3G25940 TFIIB zinc-binding protein 0.78 0.31 -0.3
50 AT1G52930 Ribosomal RNA processing Brix domain protein 0.78 0.31 -0.32
51 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 0.78 0.33 -0.29
52 AT5G62440 Protein of unknown function (DUF3223) 0.78 0.3 -0.31
53 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.77 0.31 -0.3
54 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 0.77 0.29 -0.31
55 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.32 -0.32
56 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 0.77 0.32 -0.3
57 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.77 0.29 -0.31
58 AT3G15460 Ribosomal RNA processing Brix domain protein 0.77 0.31 -0.33
59 AT1G25260 Ribosomal protein L10 family protein 0.77 0.31 -0.34
60 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.77 0.32 -0.31
61 AT3G55605 Mitochondrial glycoprotein family protein 0.77 0.3 -0.31
62 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 0.77 0.33 -0.31
63 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 0.77 0.29 -0.31
64 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.76 0.29 -0.3
65 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.75 0.31 -0.32
66 AT3G53950 glyoxal oxidase-related protein -0.75 0.32 -0.31
67 AT5G18630 alpha/beta-Hydrolases superfamily protein -0.75 0.3 -0.32
68 AT4G38350 Patched family protein -0.74 0.32 -0.32
69 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.73 0.33 -0.33
70 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A -0.71 0.33 -0.3
71 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.7 0.27 -0.31
72 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein -0.7 0.32 -0.34
73 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.32 -0.3
74 AT3G07350 Protein of unknown function (DUF506) -0.69 0.32 -0.3
75 AT1G30260 BEST Arabidopsis thaliana protein match is:
Galactosyltransferase family protein (TAIR:AT4G21060.1);
Has 30 Blast hits to 30 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.33 -0.32
76 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.68 0.3 -0.31
77 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.68 0.31 -0.31
78 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.68 0.32 -0.31
79 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.33 -0.34
80 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.3 -0.31
81 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.67 0.33 -0.31
82 AT3G56140 Protein of unknown function (DUF399 and DUF3411) -0.67 0.3 -0.3
83 AT1G30200 F-box family protein -0.67 0.33 -0.29
84 AT5G57670 Protein kinase superfamily protein -0.66 0.33 -0.31
85 AT1G67500 recovery protein 3 recovery protein 3, recovery
protein 3		 -0.65 0.33 -0.32
86 AT4G18020 CheY-like two-component responsive regulator family protein APRR2, PSEUDO-RESPONSE REGULATOR 2 -0.65 0.31 -0.33
87 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.65 0.32 -0.33
88 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.65 0.34 -0.33
89 AT4G16750 Integrase-type DNA-binding superfamily protein -0.65 0.34 -0.3
90 AT1G19835 Plant protein of unknown function (DUF869) -0.64 0.32 -0.31
91 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.64 0.31 -0.32
92 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.64 0.3 -0.33
93 AT5G19860 Protein of unknown function, DUF538 -0.64 0.32 -0.32
94 AT5G16150 plastidic GLC translocator GLUCOSE TRANSPORTER 1, plastidic
GLC translocator		 -0.63 0.33 -0.32
95 AT4G37970 cinnamyl alcohol dehydrogenase 6 ATCAD6, cinnamyl alcohol
dehydrogenase 6		 -0.63 0.31 -0.31
96 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.63 0.29 -0.33
97 AT2G20770 GCR2-like 2 GCR2-like 2 -0.63 0.31 -0.33
98 AT3G26510 Octicosapeptide/Phox/Bem1p family protein -0.63 0.3 -0.32