AT1G08460 : ATHDA8
Query Information
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AGICode AT1G08460
Description histone deacetylase 8
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 1 0.29 -0.33
2 AT3G51000 alpha/beta-Hydrolases superfamily protein 0.86 0.34 -0.34
3 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.33 -0.32
4 AT4G03030 Galactose oxidase/kelch repeat superfamily protein 0.85 0.33 -0.31
5 AT5G60360 aleurain-like protease aleurain-like protease,
aleurain-like protease, SENESCENCE
ASSOCIATED GENE2		 0.82 0.34 -0.31
6 AT3G62120 Class II aaRS and biotin synthetases superfamily protein -0.82 0.3 -0.32
7 AT1G21410 F-box/RNI-like superfamily protein SKP2A 0.82 0.33 -0.32
8 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 0.82 0.31 -0.33
9 AT2G42790 citrate synthase 3 citrate synthase 3 0.81 0.32 -0.31
10 AT1G02305 Cysteine proteinases superfamily protein 0.81 0.33 -0.32
11 AT4G01610 Cysteine proteinases superfamily protein 0.81 0.33 -0.3
12 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 0.81 0.33 -0.32
13 AT4G33150 lysine-ketoglutarate reductase/saccharopine dehydrogenase
bifunctional enzyme		 LKR, LYSINE-KETOGLUTARATE
REDUCTASE/SACCHAROPINE
DEHYDROGENASE, SACCHAROPINE
DEHYDROGENASE		 0.81 0.3 -0.3
14 AT3G28900 Ribosomal protein L34e superfamily protein -0.8 0.31 -0.31
15 AT1G18090 5'-3' exonuclease family protein -0.8 0.31 -0.31
16 AT5G19860 Protein of unknown function, DUF538 0.8 0.32 -0.33
17 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 0.79 0.29 -0.35
18 AT1G56050 GTP-binding protein-related -0.79 0.3 -0.29
19 AT4G36210 Protein of unknown function (DUF726) 0.79 0.3 -0.31
20 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 -0.79 0.31 -0.32
21 AT4G22820 A20/AN1-like zinc finger family protein 0.79 0.32 -0.32
22 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.33 -0.32
23 AT5G58740 HSP20-like chaperones superfamily protein 0.79 0.31 -0.32
24 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 0.78 0.31 -0.29
25 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM 0.78 0.33 -0.29
26 AT1G07070 Ribosomal protein L35Ae family protein -0.78 0.32 -0.31
27 AT3G01520 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.78 0.32 -0.32
28 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.78 0.32 -0.3
29 AT1G07040 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in
187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi
- 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140
(source: NCBI BLink).		 0.78 0.31 -0.3
30 AT1G74920 aldehyde dehydrogenase 10A8 aldehyde dehydrogenase 10A8 0.77 0.32 -0.31
31 AT3G11510 Ribosomal protein S11 family protein -0.77 0.33 -0.32
32 AT1G19940 glycosyl hydrolase 9B5 glycosyl hydrolase 9B5, glycosyl
hydrolase 9B5		 -0.77 0.32 -0.31
33 AT5G35370 S-locus lectin protein kinase family protein 0.77 0.33 -0.31
34 AT2G20450 Ribosomal protein L14 -0.77 0.33 -0.32
35 AT5G61170 Ribosomal protein S19e family protein -0.77 0.31 -0.32
36 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 -0.77 0.32 -0.33
37 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 0.77 0.33 -0.32
38 AT5G59220 highly ABA-induced PP2C gene 1 highly ABA-induced PP2C gene 1,
senescence associated gene 113		 0.77 0.32 -0.28
39 AT3G23600 alpha/beta-Hydrolases superfamily protein 0.77 0.32 -0.31
40 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase 0.77 0.32 -0.31
41 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 -0.77 0.33 -0.32
42 AT1G18270 ketose-bisphosphate aldolase class-II family protein 0.77 0.32 -0.32
43 AT4G27410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 72, RESPONSIVE TO
DESICCATION 26		 0.77 0.32 -0.3
44 AT3G59550 Rad21/Rec8-like family protein SISTER CHROMATID COHESION 1
PROTEIN 3, ATSYN3, SYN3		 -0.77 0.31 -0.32
45 AT2G44130 Galactose oxidase/kelch repeat superfamily protein 0.77 0.33 -0.31
46 AT4G19860 alpha/beta-Hydrolases superfamily protein 0.76 0.31 -0.3
47 AT3G56340 Ribosomal protein S26e family protein -0.76 0.3 -0.3
48 AT3G58670 Protein of unknown function (DUF1637) 0.76 0.3 -0.31
49 AT2G36620 ribosomal protein L24 ribosomal protein L24 -0.76 0.3 -0.32
50 AT1G12050 fumarylacetoacetase, putative 0.76 0.31 -0.32
51 AT3G06610 DNA-binding enhancer protein-related -0.76 0.33 -0.33
52 AT1G20220 Alba DNA/RNA-binding protein -0.76 0.3 -0.32
53 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 0.76 0.3 -0.3
54 AT2G02740 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 3, PLASTID
TRANSCRIPTIONALLY ACTIVE11, WHIRLY
3		 -0.76 0.31 -0.31
55 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 0.76 0.3 -0.3
56 AT5G55280 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 ARABIDOPSIS THALIANA HOMOLOG OF
BACTERIAL CYTOKINESIS Z-RING
PROTEIN FTSZ 1-1, CHLOROPLAST
FTSZ, homolog of bacterial
cytokinesis Z-ring protein FTSZ
1-1		 -0.76 0.32 -0.32
57 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.33 -0.3
58 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 0.75 0.3 -0.3
59 AT2G45470 FASCICLIN-like arabinogalactan protein 8 ARABINOGALACTAN PROTEIN 8,
FASCICLIN-like arabinogalactan
protein 8		 -0.75 0.33 -0.3
60 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 -0.75 0.31 -0.31
61 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 -0.75 0.34 -0.3
62 AT3G17250 Protein phosphatase 2C family protein 0.75 0.32 -0.31
63 AT1G26880 Ribosomal protein L34e superfamily protein -0.75 0.31 -0.32
64 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 -0.75 0.3 -0.29
65 AT1G71080 RNA polymerase II transcription elongation factor 0.75 0.33 -0.31
66 AT2G19620 N-MYC downregulated-like 3 N-MYC downregulated-like 3 -0.75 0.3 -0.32
67 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.3 -0.31
68 AT1G66520 formyltransferase, putative pigment defective 194 -0.75 0.31 -0.33
69 AT3G16780 Ribosomal protein L19e family protein -0.75 0.31 -0.32
70 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 -0.75 0.33 -0.31
71 AT3G21300 RNA methyltransferase family protein -0.75 0.32 -0.32
72 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 0.75 0.33 -0.33
73 AT1G20580 Small nuclear ribonucleoprotein family protein -0.75 0.3 -0.32
74 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B -0.75 0.3 -0.32
75 AT3G10250 Plant protein 1589 of unknown function 0.74 0.32 -0.33
76 AT5G60990 DEA(D/H)-box RNA helicase family protein -0.74 0.33 -0.29
77 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 -0.74 0.31 -0.32
78 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.74 0.31 -0.33
79 AT1G07230 non-specific phospholipase C1 non-specific phospholipase C1 0.74 0.31 -0.33
80 AT3G23390 Zinc-binding ribosomal protein family protein -0.74 0.33 -0.33
81 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 -0.74 0.31 -0.29
82 AT3G54360 zinc ion binding 0.74 0.34 -0.32
83 AT4G02280 sucrose synthase 3 ATSUS3, sucrose synthase 3 0.74 0.31 -0.31
84 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 -0.74 0.31 -0.32
85 AT4G15000 Ribosomal L27e protein family -0.74 0.33 -0.33
86 AT1G29250 Alba DNA/RNA-binding protein -0.74 0.31 -0.33
87 AT4G27720 Major facilitator superfamily protein -0.74 0.32 -0.33
88 AT3G05590 ribosomal protein L18 ribosomal protein L18 -0.74 0.32 -0.32
89 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 -0.74 0.31 -0.32
90 AT4G25740 RNA binding Plectin/S10 domain-containing protein -0.74 0.32 -0.32
91 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 -0.74 0.33 -0.31
92 AT5G62210 Embryo-specific protein 3, (ATS3) -0.73 0.31 -0.33
93 AT5G45350 proline-rich family protein 0.73 0.32 -0.3
94 AT3G20250 pumilio 5 pumilio 5, pumilio 5 0.73 0.31 -0.34
95 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 -0.73 0.34 -0.29
96 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 -0.73 0.31 -0.29
97 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A -0.73 0.32 -0.3
98 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.73 0.31 -0.3
99 AT1G60080 3'-5'-exoribonuclease family protein -0.73 0.31 -0.32
100 AT3G55010 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
/ phosphoribosyl-aminoimidazole synthetase / AIR synthase
(PUR5)		 ATPURM, EMBRYO DEFECTIVE 2818,
PUR5		 -0.73 0.29 -0.3
101 AT2G19750 Ribosomal protein S30 family protein -0.73 0.32 -0.31
102 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 -0.73 0.3 -0.3
103 AT2G43630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67
Blast hits to 67 proteins in 20 species: Archae - 0;
Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses
- 2; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.73 0.33 -0.32
104 AT3G10610 Ribosomal S17 family protein -0.73 0.32 -0.31
105 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 -0.73 0.32 -0.31
106 AT5G28510 beta glucosidase 24 beta glucosidase 24 0.73 0.31 -0.31
107 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 -0.73 0.33 -0.32
108 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.31 -0.32
109 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A		 0.73 0.3 -0.33
110 AT4G32150 vesicle-associated membrane protein 711 vesicle-associated membrane
protein 711, vesicle-associated
membrane protein 711		 0.73 0.32 -0.34
111 AT3G56090 ferritin 3 ferritin 3, ferritin 3 -0.73 0.29 -0.33
112 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 -0.73 0.32 -0.27
113 AT3G06700 Ribosomal L29e protein family -0.73 0.33 -0.3
114 AT1G09660 RNA-binding KH domain-containing protein -0.72 0.31 -0.33
115 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 -0.72 0.31 -0.31
116 AT1G73980 Phosphoribulokinase / Uridine kinase family 0.72 0.32 -0.31
117 AT1G24360 NAD(P)-binding Rossmann-fold superfamily protein -0.72 0.31 -0.33
118 AT1G31860 histidine biosynthesis bifunctional protein (HISIE) AT-IE, HISTIDINE BIOSYNTHESIS 2 -0.72 0.33 -0.3
119 AT5G46280 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 3 -0.72 0.31 -0.31
120 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 0.72 0.32 -0.33
121 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.72 0.3 -0.31
122 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 -0.72 0.3 -0.32
123 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A 0.72 0.31 -0.32
124 AT1G04520 plasmodesmata-located protein 2 plasmodesmata-located protein 2 -0.72 0.3 -0.32
125 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.72 0.3 -0.33
126 AT1G48830 Ribosomal protein S7e family protein -0.72 0.32 -0.31
127 AT3G14740 RING/FYVE/PHD zinc finger superfamily protein -0.72 0.32 -0.33
128 AT5G26360 TCP-1/cpn60 chaperonin family protein -0.72 0.31 -0.33
129 AT5G47210 Hyaluronan / mRNA binding family -0.72 0.31 -0.31
130 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 -0.72 0.31 -0.32
131 AT1G53120 RNA-binding S4 domain-containing protein -0.72 0.33 -0.3
132 AT4G14320 Zinc-binding ribosomal protein family protein -0.72 0.3 -0.31
133 AT5G51460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 ATTPPA -0.72 0.32 -0.31
134 AT3G59980 Nucleic acid-binding, OB-fold-like protein -0.72 0.31 -0.3
135 AT3G49590 Autophagy-related protein 13 autophagy-related 13 0.72 0.31 -0.31
136 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 -0.72 0.31 -0.31
137 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.72 0.34 -0.33
138 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein -0.72 0.3 -0.31
139 AT2G14880 SWIB/MDM2 domain superfamily protein -0.72 0.33 -0.3
140 AT4G26230 Ribosomal protein L31e family protein -0.72 0.31 -0.3
141 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 -0.72 0.31 -0.33
142 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase 0.71 0.3 -0.32
143 AT3G07350 Protein of unknown function (DUF506) 0.71 0.29 -0.32
144 AT3G45770 Polyketide synthase, enoylreductase family protein 0.71 0.33 -0.33
145 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 0.71 0.34 -0.29
146 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 0.71 0.33 -0.32