AT1G08190 : ATVAM2
Query Information
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AGICode AT1G08190
Description vacuolar protein sorting 41
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G08190 vacuolar protein sorting 41 ATVAM2, VACUOLAR PROTEIN SORTING
41, VAM2, vacuolar protein sorting
41, ZIGZAG SUPPRESSOR 2		 1 0.32 -0.29
2 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 0.78 0.31 -0.32
3 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 0.72 0.3 -0.32
4 AT4G02230 Ribosomal protein L19e family protein -0.71 0.32 -0.33
5 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.71 0.32 -0.32
6 AT1G19700 BEL1-like homeodomain 10 BEL1-like homeodomain 10,
BEL1-LIKE HOMEODOMAIN 10		 0.68 0.31 -0.29
7 AT3G19540 Protein of unknown function (DUF620) -0.67 0.34 -0.29
8 AT1G25260 Ribosomal protein L10 family protein -0.67 0.29 -0.33
9 AT1G51340 MATE efflux family protein 0.67 0.28 -0.31
10 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 -0.67 0.32 -0.31
11 AT3G18030 HAL3-like protein A ATHAL3, ARABIDOPSIS THALIANA
HAL3-LIKE PROTEIN A, HALOTOLERANCE
DETERMINANT 3, HAL3-like protein A		 -0.66 0.33 -0.31
12 AT3G23460 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.31 -0.31
13 AT4G02640 bZIP transcription factor family protein Arabidopsis thaliana basic leucine
zipper 10, BZO2H1		 0.65 0.3 -0.3
14 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.65 0.31 -0.33
15 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.31 -0.33
16 AT2G07200 Cysteine proteinases superfamily protein 0.64 0.31 -0.33
17 AT4G09880 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.32 -0.32
18 AT2G03140 alpha/beta-Hydrolases superfamily protein 0.63 0.3 -0.31
19 AT1G29140 Pollen Ole e 1 allergen and extensin family protein 0.63 0.3 -0.31
20 AT5G24840 tRNA (guanine-N-7) methyltransferase -0.63 0.32 -0.33
21 AT1G56560 Plant neutral invertase family protein alkaline/neutral invertase A 0.63 0.31 -0.29
22 AT3G21670 Major facilitator superfamily protein 0.63 0.32 -0.33
23 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein -0.63 0.32 -0.34
24 AT1G53670 methionine sulfoxide reductase B 1 ATMSRB1, methionine sulfoxide
reductase B 1		 0.63 0.33 -0.34
25 AT3G01790 Ribosomal protein L13 family protein -0.63 0.29 -0.32
26 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 -0.62 0.33 -0.31
27 AT1G56710 Pectin lyase-like superfamily protein 0.62 0.32 -0.34
28 AT3G50220 Protein of unknown function (DUF579) IRREGULAR XYLEM 15 0.62 0.29 -0.32
29 AT1G52980 GTP-binding family protein nuclear/nucleolar GTPase 2,
nuclear/nucleolar GTPase 2		 -0.62 0.31 -0.32
30 AT3G04030 Homeodomain-like superfamily protein 0.61 0.3 -0.3
31 AT3G03790 ankyrin repeat family protein / regulator of chromosome
condensation (RCC1) family protein		 0.61 0.31 -0.32
32 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 0.61 0.32 -0.31
33 AT1G44830 Integrase-type DNA-binding superfamily protein -0.61 0.32 -0.31
34 AT5G01110 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.33 -0.31
35 AT5G27000 kinesin 4 kinesin 4, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA D		 -0.61 0.31 -0.3
36 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 -0.61 0.33 -0.3
37 AT5G12370 exocyst complex component sec10 exocyst complex component sec10 0.6 0.32 -0.3
38 AT5G38700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible, LP.12 twelve leaves visible; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.31
39 AT2G32810 beta galactosidase 9 beta galactosidase 9,
beta-galactosidase 9		 0.6 0.34 -0.33
40 AT2G42160 zinc finger (ubiquitin-hydrolase) domain-containing protein BRAP2 RING ZnF UBP
domain-containing protein 1		 0.6 0.3 -0.32
41 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.59 0.33 -0.31
42 AT1G51730 Ubiquitin-conjugating enzyme family protein -0.59 0.31 -0.32
43 AT5G23405 HMG-box (high mobility group) DNA-binding family protein -0.59 0.3 -0.33
44 AT1G18450 actin-related protein 4 actin-related protein 4,
actin-related protein 4		 -0.59 0.32 -0.29
45 AT3G12350 F-box family protein 0.59 0.31 -0.33
46 AT4G13260 Flavin-binding monooxygenase family protein YUCCA2 0.59 0.32 -0.31
47 AT2G37900 Major facilitator superfamily protein 0.59 0.32 -0.32
48 AT2G13560 NAD-dependent malic enzyme 1 NAD-dependent malic enzyme 1 0.58 0.31 -0.31
49 AT3G50830 cold-regulated 413-plasma membrane 2 ATCOR413-PM2, cold-regulated
413-plasma membrane 2		 0.58 0.3 -0.31
50 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 -0.58 0.32 -0.31
51 AT5G46670 Cysteine/Histidine-rich C1 domain family protein 0.58 0.32 -0.32
52 AT1G75190 unknown protein; Has 7306 Blast hits to 3858 proteins in
279 species: Archae - 15; Bacteria - 134; Metazoa - 3314;
Fungi - 546; Plants - 228; Viruses - 207; Other Eukaryotes
- 2862 (source: NCBI BLink).		 -0.58 0.33 -0.3
53 AT3G29760 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.58 0.31 -0.31
54 AT2G20230 Tetraspanin family protein 0.57 0.32 -0.34
55 AT1G09280 CONTAINS InterPro DOMAIN/s: Rhodanese-like
(InterPro:IPR001763), Serine hydrolase
(InterPro:IPR005645); BEST Arabidopsis thaliana protein
match is: Rhodanese/Cell cycle control phosphatase
superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits
to 5912 proteins in 1592 species: Archae - 0; Bacteria -
2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses -
0; Other Eukaryotes - 2186 (source: NCBI BLink).		 -0.57 0.33 -0.33
56 AT1G21640 NAD kinase 2 NAD KINASE 2, NAD kinase 2 0.57 0.32 -0.32
57 AT4G27435 Protein of unknown function (DUF1218) 0.57 0.31 -0.3
58 AT4G26850 mannose-1-phosphate guanylyltransferase
(GDP)s;GDP-galactose:mannose-1-phosphate
guanylyltransferases;GDP-galactose:glucose-1-phosphate
guanylyltransferases;GDP-galactose:myoinositol-1-phosphate
guanylyltransferases;glucose-1-phosphate
guanylyltransferase		 vitamin c defective 2 0.57 0.31 -0.32
59 AT1G60270 beta glucosidase 6 beta glucosidase 6 0.57 0.3 -0.31
60 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 -0.57 0.31 -0.31
61 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.56 0.31 -0.31
62 AT1G68170 nodulin MtN21 /EamA-like transporter family protein -0.56 0.33 -0.31
63 AT3G45430 Concanavalin A-like lectin protein kinase family protein 0.56 0.31 -0.32
64 AT1G30810 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 0.56 0.3 -0.31
65 AT5G25170 PPPDE putative thiol peptidase family protein -0.56 0.32 -0.31
66 AT5G14720 Protein kinase superfamily protein 0.56 0.33 -0.32
67 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 0.56 0.32 -0.32
68 AT5G55910 D6 protein kinase D6 protein kinase 0.56 0.32 -0.3
69 AT2G29995 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G07175.1); Has 14 Blast hits to 14 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.32 -0.32
70 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 0.55 0.32 -0.32
71 AT1G09575 Protein of unknown function (DUF607) -0.55 0.33 -0.34
72 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 0.55 0.32 -0.31
73 AT4G00231 ARM repeat superfamily protein maternal effect embryo arrest 50 -0.55 0.3 -0.32
74 AT2G05590 TLD-domain containing nucleolar protein 0.55 0.31 -0.31
75 AT3G05690 nuclear factor Y, subunit A2 HEME ACTIVATOR PROTEIN (YEAST)
HOMOLOG 2B, HEME ACTIVATOR PROTEIN
(YEAST) HOMOLOG 2B, nuclear factor
Y, subunit A2, UNFERTILIZED EMBRYO
SAC 8		 0.55 0.3 -0.31
76 AT5G60630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.54 0.31 -0.31
77 AT4G11790 Pleckstrin homology (PH) domain superfamily protein -0.54 0.33 -0.32
78 AT1G75550 glycine-rich protein 0.54 0.31 -0.33
79 AT5G47440 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.54 0.33 -0.34
80 AT1G77740 phosphatidylinositol-4-phosphate 5-kinase 2 phosphatidylinositol-4-phosphate
5-kinase 2		 0.54 0.32 -0.33
81 AT4G26110 nucleosome assembly protein1;1 ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMLY PROTEIN 1;1, nucleosome
assembly protein1;1		 -0.54 0.32 -0.31
82 AT3G19120 PIF / Ping-Pong family of plant transposases -0.53 0.32 -0.33
83 AT1G72220 RING/U-box superfamily protein -0.53 0.32 -0.34
84 AT4G22250 RING/U-box superfamily protein -0.53 0.31 -0.31
85 AT1G71380 cellulase 3 cellulase 3, ARABIDOPSIS THALIANA
GLYCOSYL HYDROLASE 9B3, cellulase
3		 -0.53 0.32 -0.32
86 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 -0.53 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
87 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.66 0.44 -0.44 C0035