AT1G16180 : -
Query Information
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AGICode AT1G16180
Description Serinc-domain containing serine and sphingolipid biosynthesis protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G16180 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 1 0.3 -0.31
2 AT2G33150 peroxisomal 3-ketoacyl-CoA thiolase 3 3-KETOACYL-COA THIOLASE 2,
PEROXISOME DEFECTIVE 1,
peroxisomal 3-ketoacyl-CoA
thiolase 3		 0.89 0.32 -0.29
3 AT3G48890 membrane-associated progesterone binding protein 3 ARABIDOPSIS THALIANA
MEMBRANE-ASSOCIATED PROGESTERONE
BINDING PROTEIN 3, ATMP2,
membrane-associated progesterone
binding protein 3, MEMBRANE
STEROID BINDING PROTEIN 2		 0.88 0.32 -0.28
4 AT3G23490 cyanase cyanase 0.88 0.29 -0.32
5 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 0.88 0.32 -0.34
6 AT1G33490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2062 (InterPro:IPR018639); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29
species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.88 0.32 -0.31
7 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 0.87 0.33 -0.29
8 AT1G48440 B-cell receptor-associated 31-like 0.87 0.31 -0.3
9 AT2G22780 peroxisomal NAD-malate dehydrogenase 1 peroxisomal NAD-malate
dehydrogenase 1		 0.87 0.32 -0.3
10 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 0.87 0.32 -0.33
11 AT2G01350 quinolinate phoshoribosyltransferase quinolinate
phoshoribosyltransferase		 0.87 0.32 -0.3
12 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 0.87 0.32 -0.32
13 AT3G18430 Calcium-binding EF-hand family protein 0.87 0.34 -0.34
14 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 0.87 0.32 -0.33
15 AT3G43270 Plant invertase/pectin methylesterase inhibitor superfamily 0.87 0.31 -0.3
16 AT5G05110 Cystatin/monellin family protein 0.86 0.34 -0.32
17 AT3G08690 ubiquitin-conjugating enzyme 11 ATUBC11, ubiquitin-conjugating
enzyme 11		 0.86 0.31 -0.31
18 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.86 0.3 -0.33
19 AT5G21090 Leucine-rich repeat (LRR) family protein 0.86 0.3 -0.34
20 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 0.86 0.31 -0.31
21 AT5G56150 ubiquitin-conjugating enzyme 30 ubiquitin-conjugating enzyme 30 0.86 0.31 -0.32
22 AT2G42790 citrate synthase 3 citrate synthase 3 0.85 0.32 -0.32
23 AT1G65820 microsomal glutathione s-transferase, putative 0.85 0.32 -0.32
24 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 0.85 0.32 -0.33
25 AT1G54340 isocitrate dehydrogenase isocitrate dehydrogenase 0.85 0.3 -0.31
26 AT2G18950 homogentisate phytyltransferase 1 HOMOGENTISATE PHYTYLTRANSFERASE,
homogentisate phytyltransferase 1,
TPT1, VITAMIN E 2		 0.85 0.32 -0.32
27 AT1G45150 unknown protein; Has 219 Blast hits to 202 proteins in 78
species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi -
0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source:
NCBI BLink).		 0.85 0.33 -0.33
28 AT1G09430 ATP-citrate lyase A-3 ATP-citrate lyase A-3 0.85 0.31 -0.34
29 AT1G76150 enoyl-CoA hydratase 2 ATECH2, enoyl-CoA hydratase 2 0.85 0.31 -0.32
30 AT3G16190 Isochorismatase family protein 0.85 0.31 -0.32
31 AT2G02390 glutathione S-transferase zeta 1 glutathione S-transferase zeta 1,
GLUTATHIONE S-TRANSFERASE 18,
glutathione S-transferase zeta 1		 0.85 0.33 -0.31
32 AT5G04750 F1F0-ATPase inhibitor protein, putative 0.85 0.3 -0.31
33 AT5G11520 aspartate aminotransferase 3 aspartate aminotransferase 3,
YELLOW-LEAF-SPECIFIC GENE 4		 0.85 0.3 -0.3
34 AT1G23440 Peptidase C15, pyroglutamyl peptidase I-like 0.85 0.3 -0.32
35 AT3G04000 NAD(P)-binding Rossmann-fold superfamily protein 0.84 0.32 -0.33
36 AT1G53320 tubby like protein 7 tubby like protein 7, tubby like
protein 7		 0.84 0.32 -0.3
37 AT1G60420 DC1 domain-containing protein 0.84 0.34 -0.3
38 AT3G27430 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBB1 0.84 0.34 -0.3
39 AT3G46000 actin depolymerizing factor 2 actin depolymerizing factor 2 0.84 0.3 -0.31
40 AT3G21500 1-deoxy-D-xylulose 5-phosphate synthase 1 1-deoxy-D-xylulose 5-phosphate
synthase 1		 0.84 0.32 -0.33
41 AT1G26690 emp24/gp25L/p24 family/GOLD family protein 0.84 0.3 -0.32
42 AT3G56310 Melibiase family protein 0.84 0.33 -0.31
43 AT1G30090 Galactose oxidase/kelch repeat superfamily protein 0.84 0.33 -0.3
44 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 0.84 0.31 -0.32
45 AT3G45310 Cysteine proteinases superfamily protein 0.83 0.34 -0.31
46 AT2G29500 HSP20-like chaperones superfamily protein 0.83 0.31 -0.3
47 AT4G29160 SNF7 family protein SNF7.1 0.83 0.3 -0.31
48 AT2G02040 peptide transporter 2 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 2, ATPTR2-B, NITRATE
TRANSPORTER 1, peptide transporter
2, PTR2-B		 0.83 0.32 -0.32
49 AT2G46080 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF793)
(TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in
20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi -
0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.32 -0.32
50 AT5G57910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.83 0.3 -0.34
51 AT4G20330 Transcription initiation factor TFIIE, beta subunit 0.83 0.3 -0.31
52 AT5G61640 peptidemethionine sulfoxide reductase 1 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE A1,
peptidemethionine sulfoxide
reductase 1		 0.83 0.31 -0.32
53 AT3G12800 short-chain dehydrogenase-reductase B DECR, short-chain
dehydrogenase-reductase B		 0.83 0.32 -0.32
54 AT3G17820 glutamine synthetase 1.3 ARABIDOPSIS THALIANA GLUTAMINE
SYNTHASE CLONE KB6, glutamine
synthetase 1.3, GLUTAMINE
SYNTHETASE 1;3		 0.83 0.31 -0.32
55 AT3G02150 plastid transcription factor 1 plastid transcription factor 1,
TEOSINTE BRANCHED1, CYCLOIDEA AND
PCF TRANSCRIPTION FACTOR 13, TFPD		 0.83 0.33 -0.28
56 AT5G12890 UDP-Glycosyltransferase superfamily protein 0.83 0.33 -0.3
57 AT1G50940 electron transfer flavoprotein alpha electron transfer flavoprotein
alpha		 0.83 0.32 -0.34
58 AT4G19640 Ras-related small GTP-binding family protein ARA-7, ARA7, ARABIDOPSIS RAB
GTPASE HOMOLOG F2B, ATRAB5B,
ATRABF2B, RAB GTPASE HOMOLOG F2B,
RABF2B		 0.83 0.31 -0.3
59 AT2G01470 SEC12P-like 2 protein ATSEC12, SEC12P-like 2 protein 0.83 0.32 -0.3
60 AT1G15670 Galactose oxidase/kelch repeat superfamily protein 0.83 0.33 -0.31
61 AT1G18720 Protein of unknown function (DUF962) 0.83 0.31 -0.32
62 AT3G46670 UDP-glucosyl transferase 76E11 UDP-glucosyl transferase 76E11 0.82 0.3 -0.32
63 AT2G24180 cytochrome p450 71b6 cytochrome p450 71b6 0.82 0.32 -0.29
64 AT3G01970 WRKY DNA-binding protein 45 WRKY DNA-BINDING PROTEIN 45, WRKY
DNA-binding protein 45		 0.82 0.33 -0.33
65 AT2G03980 GDSL-like Lipase/Acylhydrolase superfamily protein 0.82 0.31 -0.32
66 AT2G39725 LYR family of Fe/S cluster biogenesis protein 0.82 0.31 -0.31
67 AT1G17080 Ribosomal protein L18ae family 0.82 0.31 -0.34
68 AT4G29490 Metallopeptidase M24 family protein 0.82 0.32 -0.31
69 AT2G21270 ubiquitin fusion degradation 1 ubiquitin fusion degradation 1 0.82 0.33 -0.33
70 AT3G53970 proteasome inhibitor-related 0.82 0.32 -0.31
71 AT1G72680 cinnamyl-alcohol dehydrogenase CINNAMYL ALCOHOL DEHYDROGENASE 1,
cinnamyl-alcohol dehydrogenase		 0.82 0.31 -0.33
72 AT4G30550 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 3 0.82 0.32 -0.3
73 AT3G15660 glutaredoxin 4 A. THALIANA GLUTAREDOXIN 4,
glutaredoxin 4		 0.82 0.31 -0.31
74 AT5G07810 SNF2 domain-containing protein / helicase domain-containing
protein / HNH endonuclease domain-containing protein		 -0.82 0.3 -0.3
75 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 0.82 0.32 -0.3
76 AT2G01540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.82 0.32 -0.33
77 AT3G51840 acyl-CoA oxidase 4 acyl-CoA oxidase 4, ATG6, ATSCX 0.82 0.31 -0.31
78 AT2G37110 PLAC8 family protein 0.81 0.29 -0.3
79 AT2G47710 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.81 0.33 -0.33
80 AT1G77710 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1
(InterPro:IPR005375); Has 244 Blast hits to 244 proteins in
106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi
- 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 0.81 0.31 -0.3
81 AT3G48580 xyloglucan endotransglucosylase/hydrolase 11 xyloglucan
endotransglucosylase/hydrolase 11		 0.81 0.33 -0.34
82 AT4G25810 xyloglucan endotransglycosylase 6 xyloglucan
endotransglucosylase/hydrolase 23,
xyloglucan endotransglycosylase 6		 0.81 0.32 -0.32
83 AT1G42550 plastid movement impaired1 PLASTID MOVEMENT IMPAIRED1 -0.81 0.3 -0.3
84 AT5G43330 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 2		 0.81 0.31 -0.31
85 AT5G43940 GroES-like zinc-binding dehydrogenase family protein ALCOHOL DEHYDROGENASE 2, ATGSNOR1,
S-NITROSOGLUTATHIONE REDUCTASE,
sensitive to hot temperatures 5,
PARAQUAT RESISTANT 2		 0.81 0.33 -0.31
86 AT5G11960 Protein of unknown function (DUF803) 0.81 0.31 -0.3
87 AT4G17830 Peptidase M20/M25/M40 family protein 0.81 0.31 -0.32
88 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.3 -0.29
89 AT4G29490 Metallopeptidase M24 family protein 0.81 0.34 -0.28
90 AT5G07440 glutamate dehydrogenase 2 glutamate dehydrogenase 2 0.81 0.3 -0.33
91 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 0.81 0.3 -0.32
92 AT1G02305 Cysteine proteinases superfamily protein 0.81 0.32 -0.32
93 AT1G69410 eukaryotic elongation factor 5A-3 EUKARYOTIC ELONGATION FACTOR 5A-3,
eukaryotic elongation factor 5A-3		 0.81 0.31 -0.32
94 AT1G10140 Uncharacterised conserved protein UCP031279 0.81 0.32 -0.31
95 AT2G05630 Ubiquitin-like superfamily protein ATG8D 0.81 0.31 -0.3
96 AT2G23090 Uncharacterised protein family SERF 0.81 0.32 -0.3
97 AT3G03990 alpha/beta-Hydrolases superfamily protein 0.81 0.31 -0.34
98 AT1G09140 SERINE-ARGININE PROTEIN 30 Serine/Arginine-Rich Protein
Splicing Factor 30,
SERINE-ARGININE PROTEIN 30,
ATSRP30.1, ATSRP30.2,
Serine/Arginine-Rich Protein
Splicing Factor 30		 0.81 0.3 -0.31
99 AT5G45130 RAB homolog 1 ARABIDOPSIS RAB HOMOLOG F2A,
ATRAB5A, ATRABF2A, RAB HOMOLOG
F2A, RAB5A, RABF2A, RAB homolog 1		 0.81 0.3 -0.33
100 AT5G42300 ubiquitin-like protein 5 ubiquitin-like protein 5 0.81 0.31 -0.34
101 AT1G11280 S-locus lectin protein kinase family protein -0.79 0.3 -0.31
102 AT2G29890 villin-like 1 ATVLN1, villin 1 -0.79 0.28 -0.3
103 AT4G19710 aspartate kinase-homoserine dehydrogenase ii ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase ii		 -0.78 0.32 -0.31
104 AT3G20260 Protein of unknown function (DUF1666) -0.78 0.31 -0.31
105 AT1G05470 DNAse I-like superfamily protein COTYLEDON VASCULAR PATTERN 2 -0.78 0.33 -0.32
106 AT2G40480 Plant protein of unknown function (DUF827) -0.77 0.31 -0.33
107 AT5G66000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.77 0.33 -0.31
108 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.77 0.32 -0.33
109 AT1G69420 DHHC-type zinc finger family protein -0.77 0.33 -0.3
110 AT4G24790 AAA-type ATPase family protein -0.76 0.31 -0.32
111 AT2G19200 unknown protein -0.76 0.32 -0.34
112 AT1G23790 Plant protein of unknown function (DUF936) -0.76 0.31 -0.33
113 AT3G53940 Mitochondrial substrate carrier family protein -0.76 0.3 -0.3
114 AT2G41820 Leucine-rich repeat protein kinase family protein -0.76 0.33 -0.31
115 AT2G40960 Single-stranded nucleic acid binding R3H protein -0.76 0.3 -0.31
116 AT1G09450 Protein kinase superfamily protein AtHaspin, Haspin-related gene -0.75 0.31 -0.3
117 AT1G55540 Nuclear pore complex protein -0.75 0.33 -0.3
118 AT5G43990 SET-domain containing protein lysine methyltransferase
family protein		 SET DOMAIN PROTEIN 18, SUVR2 -0.75 0.32 -0.31
119 AT5G62710 Leucine-rich repeat protein kinase family protein -0.75 0.32 -0.32
120 AT5G40740 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.3 -0.31
121 AT1G17220 Translation initiation factor 2, small GTP-binding protein fu-gaeri1 -0.75 0.3 -0.31
122 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.75 0.33 -0.31
123 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 -0.74 0.33 -0.31
124 ATCG00640 ribosomal protein L33 ribosomal protein L33 -0.74 0.31 -0.31
125 AT1G66250 O-Glycosyl hydrolases family 17 protein -0.74 0.31 -0.3
126 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.74 0.31 -0.31
127 AT3G26050 TPX2 (targeting protein for Xklp2) protein family -0.74 0.31 -0.31
128 AT3G01500 carbonic anhydrase 1 BETA CARBONIC ANHYDRASE 1,
ARABIDOPSIS THALIANA SALICYLIC
ACID-BINDING PROTEIN 3, carbonic
anhydrase 1, SALICYLIC
ACID-BINDING PROTEIN 3		 -0.74 0.32 -0.31
129 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 -0.74 0.32 -0.31
130 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 -0.73 0.29 -0.29
131 AT3G63440 cytokinin oxidase/dehydrogenase 6 CYTOKININ OXIDASE 6, ATCKX7,
cytokinin oxidase/dehydrogenase 6		 -0.73 0.33 -0.33
132 AT2G31320 poly(ADP-ribose) polymerase 2 ATPARP2, poly(ADP-ribose)
polymerase 2		 -0.73 0.31 -0.31
133 AT1G30600 Subtilase family protein -0.73 0.3 -0.31
134 AT5G65350 histone 3 11 histone 3 11 -0.73 0.31 -0.31
135 AT1G52530 CONTAINS InterPro DOMAIN/s: Hus1-like protein
(InterPro:IPR007150); Has 129 Blast hits to 128 proteins in
49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi -
10; Plants - 47; Viruses - 0; Other Eukaryotes - 15
(source: NCBI BLink).		 -0.73 0.29 -0.34
136 AT4G29750 CRS1 / YhbY (CRM) domain-containing protein -0.72 0.3 -0.31
137 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.72 0.28 -0.31
138 AT3G19570 Family of unknown function (DUF566) QWRF domain containing 1, SNOWY
COTYLEDON 3		 -0.72 0.32 -0.31
139 AT3G16260 tRNAse Z4 tRNAse Z4 -0.72 0.33 -0.32
140 AT5G19670 Exostosin family protein -0.72 0.3 -0.3
141 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.72 0.31 -0.32
142 AT1G67630 DNA polymerase alpha 2 EMBRYO DEFECTIVE 2814, DNA
polymerase alpha 2		 -0.72 0.32 -0.31
143 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein -0.72 0.3 -0.33
144 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 -0.71 0.35 -0.3
145 AT5G16720 Protein of unknown function, DUF593 -0.71 0.3 -0.31
146 AT4G38050 Xanthine/uracil permease family protein -0.71 0.3 -0.34
147 AT5G08640 flavonol synthase 1 ATFLS1, FLAVONOL SYNTHASE,
flavonol synthase 1		 -0.71 0.31 -0.29
148 AT1G63480 AT hook motif DNA-binding family protein -0.71 0.33 -0.32
149 AT3G30570 transposable element gene -0.71 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
150 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - -0.75 0.44 -0.45